Clone AT01075 Report

Search the DGRC for AT01075

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:10
Well:75
Vector:pOTB7
Associated Gene/TranscriptCG42676-RD
Protein status:AT01075.pep: gold
Sequenced Size:1546

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13923 2008-06-19 Manual selection by Bayan Parsa
CG13923 2008-12-18 5.12 accounting
CG12022 2008-12-18 5.12 accounting

Clone Sequence Records

AT01075.complete Sequence

1546 bp assembled on 2008-11-04

GenBank Submission: BT050421.1

> AT01075.complete
GCACAAAGCGGACTTGAGAAATTTGTGAAAATTTTTATAAATCGCGTGTG
TGGGCGCTTTGAAAATGGTGCTGCGATCGGGAATCATAATTCCGTTTCAG
TTTCGCGACACGAAGAAGCTGCTGATGATCGGGGTGCCGCAGGAGAACCG
CGACCTAAACATATGGGACCTAAAGAACGTGGTGCGCGCCGCTTTCGGGA
TCTACAACTTCGAGTTCCGGAACAAGAAGATCGGCTTCAACATCCCGGAC
GAACTGCTGCTGCACTATCTGGCCCAGAGGCACGACCTCACCAACTTCGT
TATAGAGATCAGTCAAGTCTACGATGTCGGCCTGGACAACTATGTGCTGA
ATCGCCAGTGCCGCTGTACAGACCAGAAAATGCTCAACGATTCGCCAACG
CCCGAGGAACCAACCAATTTGTGCCAGCCCAGCAATGTGCTAGAGGCCGC
GCCGACTCCGCTCATGTCGCTGCCACCCTGCGAGGACGAGGATCACGAGC
CTGAGCATGAGCACGAGCACGAGGAGAGCATGAAGTATCGGATCGATAAG
GAGAGCAGTGGAGCTGCCTCCGCAGAGCTGGGCTTGCCCGCCTACGAGGC
CTGCTCGCCCAAGATGGACTACGACACGCAGGACGAGCTGCCGGACTCGC
CGCACTCGCAGCCGCTGCCACCACCGCCTTTCCCATTGTCCACGGCCTTG
CCGCTGCCGCCTCCGCCCACCTCGCATCACCAACATCTGCAACAGCAGCA
GCAGCAGCAGCATGAGGAGCGCATCCAGCAAGAGTACATCATCCAGCAGC
AGCAGCAACATCAGCAGATTCAGCAGCAACAACACCACCTGGCTCTCCTG
CAGCAGCAGCAGCAGCAGGAGCAACAGCAGCAGATTCAGCAGCACCAGGG
AGTCAACATAGCCATAGGCACCACTGCGACAAACAACATTCGACAGCGCA
AGGAGCGCATGTCCAAGCGGCAGAAGGAACTGTACGTACACTTCCTGCAG
CAGCACCAGTTCATCAACGATCACCGTCGCAATGATCCTGCGCTGGACCC
ATACTGGCTGAAGCTGGCCAACCTGCTGAACGCCGTGCCGCAGGGTGCCG
TGAAGCACGTGACCGAGTGGAAGCAGACCTTCGACAACTGGCGATACCGG
ATCTTCCTTTACGCGCGCTACAACTCTAAGCTGCAGGACGAGGAGGCGCA
GAATCCGCGAAACTTCAAGCCGCTGACCCGGACCGACAAACAGGCCTACA
TCATGTGGATCCGGAACCCGGACACCGCGCCGCCCGACCTGGACAAGATG
CGCAATGTCTTCTGCAATCTGGAGGAGTCGGCGGTGCAGCAGGAGTAGAT
AGCCGTACATCCGTCGTAGCTCTAACATTTCAAATCTTCTTTGTCCTCTT
TTCAATGGTTTCTATCGTGTTAGTCGTGCGTATGTGTGTCGCTGTTTTTT
TTCCCTTTGGGGAATGCATTTTTCTTTTAGTTTGTTGTCATTGTTATGCC
TTTTTGAATATTAAACATGTGTTTTCTGAAAAAAAAAAAAAAAAAA

AT01075.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13923-RB 1585 CG13923-RB 58..1585 1..1528 7625 99.9 Plus
CG12022-RA 1554 CG12022-RA 17..333 1..317 1570 99.6 Plus
CG12022.a 1391 CG12022.a 17..329 1..317 1485 98.4 Plus
CG12022-RA 1554 CG12022-RA 1184..1301 1065..1182 185 77.1 Plus
CG12022.a 1391 CG12022.a 1014..1131 1065..1182 185 77.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1805796..1806379 945..1528 2920 100 Plus
chr3L 24539361 chr3L 1804568..1805019 316..767 2245 99.8 Plus
chr3L 24539361 chr3L 1802706..1802887 1..182 910 100 Plus
chr3L 24539361 chr3L 1805089..1805268 765..944 900 100 Plus
chr3L 24539361 chr3L 1802992..1803127 182..317 665 99.3 Plus
chr3L 24539361 chr3L 1804100..1804217 1065..1182 185 77.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:36:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1806236..1806821 945..1530 2930 100 Plus
3L 28110227 3L 1805008..1805459 316..767 2260 100 Plus
3L 28110227 3L 1803146..1803327 1..182 910 100 Plus
3L 28110227 3L 1805529..1805708 765..944 900 100 Plus
3L 28110227 3L 1803432..1803567 182..317 665 99.3 Plus
3L 28110227 3L 1804540..1804657 1065..1182 185 77.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1806236..1806821 945..1530 2930 100 Plus
3L 28103327 3L 1805008..1805459 316..767 2260 100 Plus
3L 28103327 3L 1803146..1803327 1..182 910 100 Plus
3L 28103327 3L 1805529..1805708 765..944 900 100 Plus
3L 28103327 3L 1803432..1803567 182..317 665 99.2 Plus
3R 31820162 3R 15165295..15165364 863..794 215 87.1 Minus
3L 28103327 3L 1804540..1804657 1065..1182 185 77.1 Plus
Blast to na_te.dros performed on 2019-03-16 06:09:15 has no hits.

AT01075.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:09:59 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1802706..1802887 1..182 100 -> Plus
chr3L 1802993..1803127 183..317 99 -> Plus
chr3L 1804570..1804990 318..738 99 == Plus
chr3L 1805089..1805117 765..793 100 == Plus
chr3L 1805208..1805268 884..944 100 -> Plus
chr3L 1805796..1806379 945..1528 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:47:22 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG13923-RA 1..702 65..766 99 -> Plus
CG13923-RA 775..1356 767..1348 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:17:55 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 1..1284 65..1348 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:15:56 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 1..1284 65..1348 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:16:18 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 1..1284 65..1348 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:58:04 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG13923-RA 1..766 1..766 99 -> Plus
CG13923-RA 839..1600 767..1528 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:17:54 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 28..1555 1..1528 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:56 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 40..1567 1..1528 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-11-04 10:57:06 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG13923-RA 1..766 1..766 99 -> Plus
CG13923-RA 839..1600 767..1528 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:16:18 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
CG42676-RD 40..1567 1..1528 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:59 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1803146..1803327 1..182 100 -> Plus
3L 1803433..1803567 183..317 99 -> Plus
3L 1805010..1805458 318..766 100 -> Plus
3L 1805531..1805708 767..944 100 -> Plus
3L 1806236..1806819 945..1528 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:59 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1803146..1803327 1..182 100 -> Plus
3L 1803433..1803567 183..317 99 -> Plus
3L 1805010..1805458 318..766 100 -> Plus
3L 1805531..1805708 767..944 100 -> Plus
3L 1806236..1806819 945..1528 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:09:59 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1803146..1803327 1..182 100 -> Plus
3L 1803433..1803567 183..317 99 -> Plus
3L 1805010..1805458 318..766 100 -> Plus
3L 1805531..1805708 767..944 100 -> Plus
3L 1806236..1806819 945..1528 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:56 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1803433..1803567 183..317 99 -> Plus
arm_3L 1803146..1803327 1..182 100 -> Plus
arm_3L 1805010..1805458 318..766 100 -> Plus
arm_3L 1805531..1805708 767..944 100 -> Plus
arm_3L 1806236..1806819 945..1528 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:49:04 Download gff for AT01075.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1805010..1805458 318..766 100 -> Plus
3L 1805531..1805708 767..944 100 -> Plus
3L 1806236..1806819 945..1528 100   Plus
3L 1803146..1803327 1..182 100 -> Plus
3L 1803433..1803567 183..317 99 -> Plus

AT01075.pep Sequence

Translation from 64 to 1347

> AT01075.pep
MVLRSGIIIPFQFRDTKKLLMIGVPQENRDLNIWDLKNVVRAAFGIYNFE
FRNKKIGFNIPDELLLHYLAQRHDLTNFVIEISQVYDVGLDNYVLNRQCR
CTDQKMLNDSPTPEEPTNLCQPSNVLEAAPTPLMSLPPCEDEDHEPEHEH
EHEESMKYRIDKESSGAASAELGLPAYEACSPKMDYDTQDELPDSPHSQP
LPPPPFPLSTALPLPPPPTSHHQHLQQQQQQQHEERIQQEYIIQQQQQHQ
QIQQQQHHLALLQQQQQQEQQQQIQQHQGVNIAIGTTATNNIRQRKERMS
KRQKELYVHFLQQHQFINDHRRNDPALDPYWLKLANLLNAVPQGAVKHVT
EWKQTFDNWRYRIFLYARYNSKLQDEEAQNPRNFKPLTRTDKQAYIMWIR
NPDTAPPDLDKMRNVFCNLEESAVQQE*

AT01075.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24840-PA 746 GF24840-PA 395..746 85..427 1186 79.3 Plus
Dana\GF24840-PA 746 GF24840-PA 1..102 1..102 466 84.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14829-PA 316 GG14829-PA 168..316 279..427 789 95.3 Plus
Dere\GG14828-PA 409 GG14828-PA 1..102 1..102 468 84.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16437-PA 359 GH16437-PA 212..359 280..427 773 94.6 Plus
Dgri\GH16436-PA 445 GH16436-PA 1..102 1..102 469 84.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42676-PF 427 CG42676-PF 1..427 1..427 2300 100 Plus
CG42676-PD 427 CG13923-PB 1..427 1..427 2300 100 Plus
CG42676-PC 409 CG42676-PC 1..400 1..422 831 45.7 Plus
CG42676-PE 86 CG42676-PE 1..84 1..84 435 100 Plus
CG15772-PB 259 CG15772-PB 18..96 203..278 171 50 Plus
CG15772-PA 259 CG15772-PA 18..96 203..278 171 50 Plus
MED23-PA 1439 CG3695-PA 1351..1439 226..323 168 40.8 Plus
Ptip-PA 2294 CG32133-PA 204..270 220..290 168 54.9 Plus
cpo-PP 841 CG43738-PP 763..819 221..277 166 59.6 Plus
CG30389-PD 980 CG30389-PD 825..905 194..278 165 47.7 Plus
CG30389-PC 980 CG30389-PC 825..905 194..278 165 47.7 Plus
CG30389-PA 980 CG30389-PA 825..905 194..278 165 47.7 Plus
CG30389-PF 1009 CG30389-PF 825..905 194..278 165 47.7 Plus
CG30389-PE 1037 CG30389-PE 882..962 194..278 165 47.7 Plus
MED25-PA 863 CG12254-PA 396..526 216..331 164 34.4 Plus
CG44085-PH 756 CG44085-PH 246..428 110..278 163 30.9 Plus
CG44085-PL 833 CG44085-PL 323..505 110..278 163 30.9 Plus
CG44085-PI 833 CG44085-PI 323..505 110..278 163 30.9 Plus
CG44085-PC 836 CG44085-PC 323..505 110..278 163 30.9 Plus
CG44085-PM 864 CG44085-PM 208..390 110..278 163 30.9 Plus
CG44085-PF 902 CG44085-PF 246..428 110..278 163 30.9 Plus
CG44085-PD 918 CG44085-PD 246..428 110..278 163 30.9 Plus
CG44085-PG 942 CG44085-PG 246..428 110..278 163 30.9 Plus
CG44085-PK 979 CG44085-PK 323..505 110..278 163 30.9 Plus
CG44085-PJ 979 CG44085-PJ 323..505 110..278 163 30.9 Plus
CG44085-PN 1007 CG44085-PN 323..505 110..278 163 30.9 Plus
Unr-PC 1032 CG7015-PC 60..131 215..282 163 50.7 Plus
Unr-PA 1039 CG7015-PA 60..131 215..282 163 50.7 Plus
Unr-PE 1057 CG7015-PE 60..131 215..282 163 50.7 Plus
Unr-PD 1057 CG7015-PD 60..131 215..282 163 50.7 Plus
Unr-PB 1057 CG7015-PB 60..131 215..282 163 50.7 Plus
CG44085-PP 2246 CG44085-PP 219..401 110..278 163 30.9 Plus
CG44085-PO 2381 CG44085-PO 208..390 110..278 163 30.9 Plus
Lasp-PB 657 CG3849-PB 114..282 151..306 159 31.3 Plus
CG16711-PC 1497 CG16711-PC 1368..1423 221..278 159 61 Plus
Ptip-PA 2294 CG32133-PA 828..952 183..315 158 36.1 Plus
CG6700-PB 874 CG6700-PB 90..220 203..326 158 35.2 Plus
CG6700-PA 874 CG6700-PA 90..220 203..326 158 35.2 Plus
Sp1-PB 520 CG1343-PB 420..509 218..329 157 39.5 Plus
Sp1-PD 715 CG1343-PD 615..704 218..329 157 39.5 Plus
Sp1-PE 720 CG1343-PE 620..709 218..329 157 39.5 Plus
Sp1-PF 726 CG1343-PF 615..704 218..329 157 39.5 Plus
Zcchc7-PA 1734 CG9715-PA 1515..1615 193..276 157 40.6 Plus
Tet-PA 2860 CG43444-PA 711..789 205..278 157 48.8 Plus
Tet-PE 2866 CG43444-PE 717..795 205..278 157 48.8 Plus
Tet-PB 2915 CG43444-PB 766..844 205..278 157 48.8 Plus
Tet-PF 2921 CG43444-PF 772..850 205..278 157 48.8 Plus
sr-PE 906 CG7847-PE 328..456 221..345 156 31.7 Plus
sr-PB 906 CG7847-PB 328..456 221..345 156 31.7 Plus
sr-PA 1186 CG7847-PA 608..736 221..345 156 31.7 Plus
sr-PD 1271 CG7847-PD 608..736 221..345 156 31.7 Plus
sbb-PH 2302 CG5580-PH 1925..1983 221..290 156 51.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12521-PA 367 GI12521-PA 219..367 279..427 768 92.6 Plus
Dmoj\GI12520-PA 441 GI12520-PA 1..102 1..102 465 84.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25310-PA 360 GL25310-PA 8..360 85..427 1203 81.4 Plus
Dper\GL25308-PA 391 GL25308-PA 6..68 40..102 261 76.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23754-PA 354 GA23754-PA 2..354 85..427 1194 80.9 Plus
Dpse\GA23753-PA 423 GA23753-PA 1..102 1..102 469 84.3 Plus
Dpse\GA23753-PA 423 GA23753-PA 284..416 292..424 397 55.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14451-PA 320 GM14451-PA 1..320 106..427 1174 95.3 Plus
Dsec\GM14450-PA 409 GM14450-PA 1..102 1..102 469 85.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13651-PA 323 GD13651-PA 1..323 106..427 1646 96.6 Plus
Dsim\GD13650-PA 409 GD13650-PA 1..102 1..102 469 85.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:43:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12425-PA 349 GJ12425-PA 201..349 279..427 780 94 Plus
Dvir\GJ12424-PA 438 GJ12424-PA 1..102 1..102 469 84.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20330-PA 814 GK20330-PA 666..814 279..427 780 94 Plus
Dwil\GK20330-PA 814 GK20330-PA 1..102 1..102 462 83.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21192-PA 319 GE21192-PA 1..319 106..427 1142 91 Plus
Dyak\GE21191-PA 409 GE21191-PA 1..102 1..102 469 84.3 Plus

AT01075.hyp Sequence

Translation from 64 to 1347

> AT01075.hyp
MVLRSGIIIPFQFRDTKKLLMIGVPQENRDLNIWDLKNVVRAAFGIYNFE
FRNKKIGFNIPDELLLHYLAQRHDLTNFVIEISQVYDVGLDNYVLNRQCR
CTDQKMLNDSPTPEEPTNLCQPSNVLEAAPTPLMSLPPCEDEDHEPEHEH
EHEESMKYRIDKESSGAASAELGLPAYEACSPKMDYDTQDELPDSPHSQP
LPPPPFPLSTALPLPPPPTSHHQHLQQQQQQQHEERIQQEYIIQQQQQHQ
QIQQQQHHLALLQQQQQQEQQQQIQQHQGVNIAIGTTATNNIRQRKERMS
KRQKELYVHFLQQHQFINDHRRNDPALDPYWLKLANLLNAVPQGAVKHVT
EWKQTFDNWRYRIFLYARYNSKLQDEEAQNPRNFKPLTRTDKQAYIMWIR
NPDTAPPDLDKMRNVFCNLEESAVQQE*

AT01075.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG42676-PF 427 CG42676-PF 1..427 1..427 2300 100 Plus
CG42676-PD 427 CG13923-PB 1..427 1..427 2300 100 Plus
CG42676-PC 409 CG42676-PC 1..400 1..422 831 45.7 Plus
CG42676-PE 86 CG42676-PE 1..84 1..84 435 100 Plus
CG15772-PB 259 CG15772-PB 18..96 203..278 171 50 Plus