BDGP Sequence Production Resources |
Search the DGRC for AT01390
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 13 |
Well: | 90 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG8398-RC |
Protein status: | AT01390.pep: gold |
Preliminary Size: | 1947 |
Sequenced Size: | 1658 |
Gene | Date | Evidence |
---|---|---|
CG8398 | 2004-07-14 | Blastp of sequenced clone |
CG8398 | 2008-04-29 | Release 5.5 accounting |
CG8398 | 2008-08-15 | Release 5.9 accounting |
CG8398 | 2008-12-18 | 5.12 accounting |
1658 bp (1658 high quality bases) assembled on 2004-07-14
GenBank Submission: BT015316
> AT01390.complete CATATTTAAGTTCGACTTATGCCTTTCCGGGCCGAACACAAGGCAGAGGA CGAGAAGGTGCAGATCACAGGTCCGGAGGACAACCAACACCAACAAAACA ACAACAACAACGATTGGGAGCCGAACAGGATGGTGCTACCGTTTGGACTT GGACCCGATGGCCATCACGTGGATGCCATTCAGAGTGCTCCGGCGCCCAG TGCGCCCCCCGCCCACATGATGCCACCAGCCTACGCCCGGGGACAAACAA ACATATACACAGGTGTTCCGATCATCGTGAATCCCTACATAGACTTCATC GTGGTCAACGGGGATGATCGATACATGATCAGATGCGAACGAAAGTCGGT ACTCGAGCGGAGCGTGGAGCTGGCCAAGCTTATCCACGCCGGTCCGAACA GCGGTCGCAAGAGCGACAATCATTTCCAGATACTCAACGTGGACAAGAAC GACTTCGAGCTGATCGTCCGCTACATGGAGAAGCACTTCATTCCCTACCG CGATCACAAGCACCTGCTCAAGATACTGGAGCTATCCGATCGCTTCAACG TTCCAGATCTGATAATCTACTGCATTCGCGAACTTGATCTCAGAATCTCG AGCGCCACGGCACTGGACATCTTCAAGGCGCTGTGGTTCTACCAGGGCAT CGCACTGACCAACCAGCACCAAACGGTGATCACCACCCAGGAGACGGGCC AGCAGCTGGCCAGGAAGAAGGCGACCAAGGCGAAGGCGGCGGCCAAGCAG CTGGCGGCTGCCAAGGCCTCTCAGTCCACCGAAAACGGAGCGGAGGGCGA TGGAGCCCAGCAGAACCTCATTCCTAACCCAAATCCCTTTACCACCGAAG ATTACGGCGTGGCGCTGCTGCACAACACGCTCCAGCTGATCGATATGCAC GCAGAGCTGCAGCTTTCGATGCCGGAGATCAGTGATCTCAGGTTCGAGGA GCTGGAGACGCTGGTCAAGAGGGATACCTTGCAGCTCAGGTCGGAGGTCA CTCTGTTCGAGTGCCTGGCCACGTGGAGTCTGGCGGAGTGCGCCCGCAAG CATATCGATGCCACGCCGGAGAACCGTCGCACTGTCCTCGGTCCACTATG CCTCACACCTCGTTACTTGCGGATGACCGCCAGCGAATTCCGGCGATGCT GCGAACGCCTGGAGCTACTGCCACCCACTGAGATATCTCTTATCACCGAC GCCCTCGATGGCAAAAAGCTAAAGAACCTCACCGATCAGCAGGCGGAGCT GCTGGAGAAGTTCCGCCAGCCGCGTGCCGAATACGCCCGGATGCCCGTCC ACCTGAGCGACCGGAGCAGTCCGAAGAACTATCCCAAGAAGATGCGGCTG GCCCACGAGGGTCGGCCCACGGAGGATGGATGCTGGGAGAAGGTGGGAAT GAACTGTCTCCGCATCTTCGTCTGCATATTTGACTGATCCGAGCAGTCCG ATGGGGAGGAGGAGGAGGAGGAGGAGGACGGCGATGAGGAGGAGGAAGAT GATGGATCCGATGAGGAAAATGGAAATGGAAATAGAGGGGGCAGAAATCG ACCCAGAGACAACGGAGGATGAGATGATGATCCCACATAGACTTGTTGCA TTAAACGAATATTAGCGCTTATGAATTACTTAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8398.i | 2911 | CG8398.i | 375..1966 | 41..1632 | 7885 | 99.6 | Plus |
CG8398-RA | 2089 | CG8398-RA | 375..1966 | 41..1632 | 7885 | 99.6 | Plus |
CG8398.h | 2366 | CG8398.h | 375..1966 | 41..1632 | 7885 | 99.6 | Plus |
CG8398.i | 2911 | CG8398.i | 52..92 | 1..41 | 205 | 100 | Plus |
CG8398-RA | 2089 | CG8398-RA | 52..92 | 1..41 | 205 | 100 | Plus |
CG8398.h | 2366 | CG8398.h | 52..92 | 1..41 | 205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6609107..6609754 | 561..1208 | 3195 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 6608511..6609041 | 41..565 | 2500 | 98.5 | Plus |
chr3L | 24539361 | chr3L | 6610214..6610635 | 1210..1631 | 2035 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 6601773..6601813 | 1..41 | 205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6616666..6617316 | 561..1211 | 3240 | 99.8 | Plus |
3L | 28110227 | 3L | 6616076..6616600 | 41..565 | 2610 | 99.8 | Plus |
3L | 28110227 | 3L | 6617767..6618189 | 1210..1632 | 2055 | 99.1 | Plus |
3L | 28110227 | 3L | 6609364..6609404 | 1..41 | 205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6609766..6610416 | 561..1211 | 3240 | 99.8 | Plus |
3L | 28103327 | 3L | 6609176..6609700 | 41..565 | 2610 | 99.8 | Plus |
3L | 28103327 | 3L | 6610867..6611289 | 1210..1632 | 2055 | 99 | Plus |
3L | 28103327 | 3L | 6602464..6602504 | 1..41 | 205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6601773..6601815 | 1..42 | 95 | -> | Plus |
chr3L | 6608513..6609037 | 43..561 | 98 | -> | Plus |
chr3L | 6609108..6609756 | 562..1210 | 99 | -> | Plus |
chr3L | 6610215..6610635 | 1211..1631 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 218..1614 | 41..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 218..1614 | 41..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 218..1614 | 41..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 218..1614 | 41..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 218..1614 | 41..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RB | 1..1618 | 1..1628 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RD | 512..2094 | 41..1623 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 40..82 | 1..42 | 95 | -> | Plus |
CG8398-RA | 365..1953 | 43..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RB | 1..1618 | 1..1628 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8398-RA | 40..82 | 1..42 | 95 | -> | Plus |
CG8398-RA | 365..1953 | 43..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6609364..6609406 | 1..42 | 95 | -> | Plus |
3L | 6616078..6616596 | 43..561 | 100 | -> | Plus |
3L | 6616667..6617315 | 562..1210 | 99 | -> | Plus |
3L | 6617768..6618188 | 1211..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6609364..6609406 | 1..42 | 95 | -> | Plus |
3L | 6616078..6616596 | 43..561 | 100 | -> | Plus |
3L | 6616667..6617315 | 562..1210 | 99 | -> | Plus |
3L | 6617768..6618188 | 1211..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6609364..6609406 | 1..42 | 95 | -> | Plus |
3L | 6616078..6616596 | 43..561 | 100 | -> | Plus |
3L | 6616667..6617315 | 562..1210 | 99 | -> | Plus |
3L | 6617768..6618188 | 1211..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6602464..6602506 | 1..42 | 95 | -> | Plus |
arm_3L | 6609178..6609696 | 43..561 | 100 | -> | Plus |
arm_3L | 6609767..6610415 | 562..1210 | 99 | -> | Plus |
arm_3L | 6610868..6611288 | 1211..1631 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6609178..6609696 | 43..561 | 100 | -> | Plus |
3L | 6609767..6610415 | 562..1210 | 99 | -> | Plus |
3L | 6610868..6611288 | 1211..1631 | 99 | Plus | |
3L | 6602464..6602506 | 1..42 | 95 | -> | Plus |
Translation from 1 to 1436
> AT01390.hyp IFKFDLCLSGPNTIAEDEKVQITGPEDNQHQQNNNNNDWEPNRMVLPFGL GPDGHHVDAIQSAPAPSAPPAHMMPPAYARGQTNIYTGVPIIVNPYIDFI VVNGDDRYMIRCERKSVLERSVELAKLIHAGPNSGRKSDNHFQILNVDKN DFELIVRYMEKHFIPYRDHKHLLKILELSDRFNVPDLIIYCIRELDLRIS SATALDIFKALWFYQGIALTNQHQTVITTQETGQQLARKKATKAKAAAKQ LAAAKASQSTENGAEGDGAQQNLIPNPNPFTTEDYGVALLHNTLQLIDMH AELQLSMPEISDLRFEELETLVKRDTLQLRSEVTLFECLATWSLAECARK HIDATPENRRTVLGPLCLTPRYLRMTASEFRRCCERLELLPPTEISLITD ALDGKKLKNLTDQQAELLEKFRQPRAEYARMPVHLSDRSSPKNYPKKMRL AHEGRPTEDGCWEKVGMNCLRIFVCIFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8398-PA | 537 | CG8398-PA | 74..537 | 15..478 | 2443 | 100 | Plus |
CG8398-PE | 435 | CG8398-PE | 1..435 | 44..478 | 2277 | 100 | Plus |
CG8398-PD | 435 | CG8398-PD | 1..435 | 44..478 | 2277 | 100 | Plus |
CG8398-PC | 435 | CG8398-PC | 1..435 | 44..478 | 2277 | 100 | Plus |
Translation from 18 to 1436
> AT01390.pep MPFRAEHKAEDEKVQITGPEDNQHQQNNNNNDWEPNRMVLPFGLGPDGHH VDAIQSAPAPSAPPAHMMPPAYARGQTNIYTGVPIIVNPYIDFIVVNGDD RYMIRCERKSVLERSVELAKLIHAGPNSGRKSDNHFQILNVDKNDFELIV RYMEKHFIPYRDHKHLLKILELSDRFNVPDLIIYCIRELDLRISSATALD IFKALWFYQGIALTNQHQTVITTQETGQQLARKKATKAKAAAKQLAAAKA SQSTENGAEGDGAQQNLIPNPNPFTTEDYGVALLHNTLQLIDMHAELQLS MPEISDLRFEELETLVKRDTLQLRSEVTLFECLATWSLAECARKHIDATP ENRRTVLGPLCLTPRYLRMTASEFRRCCERLELLPPTEISLITDALDGKK LKNLTDQQAELLEKFRQPRAEYARMPVHLSDRSSPKNYPKKMRLAHEGRP TEDGCWEKVGMNCLRIFVCIFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23544-PA | 586 | GF23544-PA | 97..522 | 27..456 | 1979 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15352-PA | 568 | GG15352-PA | 77..523 | 10..458 | 2088 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15166-PA | 539 | GH15166-PA | 105..539 | 38..472 | 1946 | 88.5 | Plus |
Dgri\GH13939-PA | 376 | GH13939-PA | 1..376 | 96..472 | 1704 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
axed-PA | 537 | CG8398-PA | 69..537 | 4..472 | 2448 | 99.1 | Plus |
axed-PE | 435 | CG8398-PE | 1..435 | 38..472 | 2277 | 100 | Plus |
axed-PD | 435 | CG8398-PD | 1..435 | 38..472 | 2277 | 100 | Plus |
axed-PC | 435 | CG8398-PC | 1..435 | 38..472 | 2277 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12105-PA | 576 | GI12105-PA | 148..576 | 38..472 | 1815 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13271-PA | 354 | GL13271-PA | 186..354 | 304..472 | 814 | 87.6 | Plus |
Dper\GL13271-PA | 354 | GL13271-PA | 108..186 | 34..112 | 396 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21046-PA | 583 | GA21046-PA | 120..552 | 34..465 | 2002 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14792-PA | 501 | GM14792-PA | 182..458 | 182..458 | 1451 | 98.9 | Plus |
Dsec\GM14792-PA | 501 | GM14792-PA | 68..182 | 3..116 | 415 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13964-PA | 567 | GD13964-PA | 68..524 | 3..458 | 2108 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13379-PA | 514 | GJ13379-PA | 77..514 | 34..472 | 1943 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12549-PA | 562 | GK12549-PA | 55..521 | 4..467 | 1992 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21571-PA | 595 | GE21571-PA | 96..546 | 6..458 | 2079 | 95.4 | Plus |