Clone AT01495 Report

Search the DGRC for AT01495

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:14
Well:95
Vector:pOTB7
Associated Gene/TranscriptCG8105-RA
Protein status:AT01495.pep: gold
Preliminary Size:1452
Sequenced Size:1633

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8105 2002-01-01 Sim4 clustering to Release 2
CG8105 2002-01-03 Blastp of sequenced clone
CG8105 2003-01-01 Sim4 clustering to Release 3
CG8105 2008-04-29 Release 5.5 accounting
CG8105 2008-08-15 Release 5.9 accounting
CG8105 2008-12-18 5.12 accounting

Clone Sequence Records

AT01495.complete Sequence

1633 bp (1633 high quality bases) assembled on 2002-01-03

GenBank Submission: AY075158

> AT01495.complete
CGGCGGCGACAGTCAGATCGGATTCGGTTTTCCCCGGCCAAAAATCCCGA
GTCAAGATGTTGCTCCAATTGAGGCGATTGGCGATCCTGTTCCTGCTCCA
CGCTCTCATCCCCATCCTTGCGCTATCTGTTCCCATGGTGGAGCAAGTGC
AGCCGGCGGACGAGCTGCTATCGTCGCATTGGCTAAGACAGGCGCAGTCT
CAGTTGCGCGAACGTCTGGCCAGAACCAAGGACTCCATCGCCGACGTCCG
ACAGGCCAAGAATGTGGTGATGCTCCTGGGCGATGGACTGTCCATCACCA
CCTTAACGGCCGCTCGCATCCTAAAGGGGCAACGTCGCGGCGGACGCGGA
GAGGATGCACAGCTGGCCGTGGAACAATTCCCCTTCAGCGGACTGAGCAA
GACATACTGCATCGACGAGCAGACACCGGACTCCGCCTGCACGGCCACCG
CCTATTTCGGCGGTGTGAAGACGCACAGCGGCACAGTGGGTCAGAGTGGC
AGTGGTGAGCGCGTGGACTCCGTACTCCAGTGGGCACAGCGAGCGGGCAA
GGCCACGGGAGTGGTGACCACCACCCGTTTGACGGACGCCAGTCCGGCTG
GTGCCTACGCCCATGTGAGCAGGCGTGGCGAGGAGCTGGAGATTGCGCGA
CAGCTGGTGGAGGAGGAGCCGGGACGGAATCTTAATGTCATCCTGGGCGG
TGGTCTGGGAAAATTTGCCGATGAGCGACGGGATGGCAAGGATCTGCTGG
CTCAGTGGCGTGAATCGAATCCCAATGGCTGCTTCTCGCGATCCCTGAAA
GAGCTGAGGAACTGCACCGATGCTACCGGTACACTGCTGGGTATCTTCAG
CGACAGCCACATGTCATATCACTTGGCCGCCAGCAAGGAGCTGCCGCGAC
TCTGCGACATGGCAGCGGCGGCCATTGAAAAACTGGAGAGAAAGTCTCAG
GAGGATGGGAATGGTTACTTCGTGTTCATTGAGGGCGGACGGATTGATCA
TGGACACCACGAAACCCGGGTGGGCTACGCCCTCGATGAGATGGTCGAGT
TCGATGCGGCTGTGGAGACGGTGATCCAGATGACCGATCCGCGCGATACT
CTGGTAGTGGTCACCGCCGATCATTCGCATACGCTTAGCATGTCGGGATA
CGCGAAGCGGGGCACACCCATCCTGGGCATGGATGCACAGCAGCGGGATG
TGAACGGGGTGCCATACAGCACCCTCAACTATGCCATCGGCAAGTGGCAG
AGTCTGGACAAGGATGGACGTCGGGAGAGTCCCAGCAAGACATTGAGTCC
CACATCCTACACACCCAGCTATATTCATGGAAGAAAGGGCGTGCATTCTG
GCGAGGATGTGGTCGTGTTTGCAATGGGCCCGCAGTCGCATCTGTTCGGT
GGCGTCATGGAGCAGAATCTGCTGCCCCATATAATGGGCTATGCCGCCTG
TCTGGGCAATGGCCTCACTCTCTGCAACCAGGACAAGGATGCGGATATGA
TTGCCTGATTTTGCGAAGTTTTTCGGATAAATTTTTGTTTTCTGTTCTAA
ATAAATGTTCTTGTAGTGCAAAAAAAAAAAAAAAAAAAACCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT01495.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-RA 1794 CG8105-RA 116..1685 1..1570 7835 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15477610..15478911 1..1302 6510 100 Plus
chrX 22417052 chrX 15478976..15479243 1303..1570 1340 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:37:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15587733..15589034 1..1302 6495 99.9 Plus
X 23542271 X 15589099..15589366 1303..1570 1340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15595831..15597132 1..1302 6495 99.9 Plus
X 23527363 X 15597197..15597464 1303..1570 1340 100 Plus
Blast to na_te.dros performed 2019-03-15 11:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
BS 5142 BS BS 5142bp 5043..5134 1498..1589 136 60.9 Plus

AT01495.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:35:17 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15478976..15479242 1303..1569 100   Plus
chrX 15477610..15478911 1..1302 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:48:03 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 57..1508 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:57:46 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 57..1508 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:31:11 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 57..1508 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:22:31 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 57..1508 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:38:45 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1452 57..1508 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:22:27 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1569 1..1569 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:57:45 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1569 1..1569 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:31:11 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1569 1..1569 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:22:31 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1569 1..1569 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:45 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
CG8105-RA 1..1569 1..1569 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:17 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
X 15587733..15589034 1..1302 99 -> Plus
X 15589099..15589365 1303..1569 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:17 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
X 15587733..15589034 1..1302 99 -> Plus
X 15589099..15589365 1303..1569 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:17 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
X 15587733..15589034 1..1302 99 -> Plus
X 15589099..15589365 1303..1569 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:31:11 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15481766..15483067 1..1302 99 -> Plus
arm_X 15483132..15483398 1303..1569 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:57:28 Download gff for AT01495.complete
Subject Subject Range Query Range Percent Splice Strand
X 15595831..15597132 1..1302 99 -> Plus
X 15597197..15597463 1303..1569 100   Plus

AT01495.hyp Sequence

Translation from 2 to 1507

> AT01495.hyp
AATVRSDSVFPGQKSRVKMLLQLRRLAILFLLHALIPILALSVPMVEQVQ
PADELLSSHWLRQAQSQLRERLARTKDSIADVRQAKNVVMLLGDGLSITT
LTAARILKGQRRGGRGEDAQLAVEQFPFSGLSKTYCIDEQTPDSACTATA
YFGGVKTHSGTVGQSGSGERVDSVLQWAQRAGKATGVVTTTRLTDASPAG
AYAHVSRRGEELEIARQLVEEEPGRNLNVILGGGLGKFADERRDGKDLLA
QWRESNPNGCFSRSLKELRNCTDATGTLLGIFSDSHMSYHLAASKELPRL
CDMAAAAIEKLERKSQEDGNGYFVFIEGGRIDHGHHETRVGYALDEMVEF
DAAVETVIQMTDPRDTLVVVTADHSHTLSMSGYAKRGTPILGMDAQQRDV
NGVPYSTLNYAIGKWQSLDKDGRRESPSKTLSPTSYTPSYIHGRKGVHSG
EDVVVFAMGPQSHLFGGVMEQNLLPHIMGYAACLGNGLTLCNQDKDADMI
A*

AT01495.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG8105-PA 483 CG8105-PA 1..483 19..501 2490 100 Plus
CG3264-PB 533 CG3264-PB 52..532 47..492 1032 44.6 Plus
CG3264-PA 533 CG3264-PA 52..532 47..492 1032 44.6 Plus
CG3292-PA 543 CG3292-PA 62..542 51..494 1021 45.1 Plus
CG3290-PA 538 CG3290-PA 57..531 51..491 1020 44.8 Plus

AT01495.pep Sequence

Translation from 56 to 1507

> AT01495.pep
MLLQLRRLAILFLLHALIPILALSVPMVEQVQPADELLSSHWLRQAQSQL
RERLARTKDSIADVRQAKNVVMLLGDGLSITTLTAARILKGQRRGGRGED
AQLAVEQFPFSGLSKTYCIDEQTPDSACTATAYFGGVKTHSGTVGQSGSG
ERVDSVLQWAQRAGKATGVVTTTRLTDASPAGAYAHVSRRGEELEIARQL
VEEEPGRNLNVILGGGLGKFADERRDGKDLLAQWRESNPNGCFSRSLKEL
RNCTDATGTLLGIFSDSHMSYHLAASKELPRLCDMAAAAIEKLERKSQED
GNGYFVFIEGGRIDHGHHETRVGYALDEMVEFDAAVETVIQMTDPRDTLV
VVTADHSHTLSMSGYAKRGTPILGMDAQQRDVNGVPYSTLNYAIGKWQSL
DKDGRRESPSKTLSPTSYTPSYIHGRKGVHSGEDVVVFAMGPQSHLFGGV
MEQNLLPHIMGYAACLGNGLTLCNQDKDADMIA*

AT01495.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21914-PA 482 GF21914-PA 25..478 28..476 1907 77.3 Plus
Dana\GF12326-PA 544 GF12326-PA 62..543 33..477 1064 44.4 Plus
Dana\GF12324-PA 535 GF12324-PA 52..533 29..475 1019 42.5 Plus
Dana\GF23560-PA 523 GF23560-PA 43..514 42..474 890 41 Plus
Dana\GF17216-PA 543 GF17216-PA 28..528 6..467 862 39.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17892-PA 487 GG17892-PA 1..479 1..479 2375 91.9 Plus
Dere\GG20709-PA 532 GG20709-PA 51..532 28..475 1064 44.2 Plus
Dere\GG20710-PA 538 GG20710-PA 57..535 33..477 1009 44.1 Plus
Dere\GG20711-PA 541 GG20711-PA 59..541 30..475 965 43.9 Plus
Dere\GG13235-PA 529 GG13235-PA 43..514 42..474 907 41.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21450-PA 529 GH21450-PA 47..527 28..474 1042 44.1 Plus
Dgri\GH20675-PA 539 GH20675-PA 56..539 29..475 1023 45.1 Plus
Dgri\GH15376-PA 523 GH15376-PA 28..511 30..474 932 42.7 Plus
Dgri\GH18436-PA 542 GH18436-PA 45..533 16..474 880 39.7 Plus
Dgri\GH19241-PA 526 GH19241-PA 66..525 41..477 834 40.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Alp11-PA 483 CG8105-PA 1..483 1..483 2490 100 Plus
Alp8-PB 533 CG3264-PB 52..532 29..474 1032 44.6 Plus
Alp8-PA 533 CG3264-PA 52..532 29..474 1032 44.6 Plus
Alp7-PA 543 CG3292-PA 62..542 33..476 1021 45.1 Plus
Alp2-PA 538 CG3290-PA 57..531 33..473 1020 44.8 Plus
Alp1-PA 523 CG5656-PA 43..514 42..474 872 40.9 Plus
Alp1-PB 530 CG5656-PB 43..521 42..474 856 40.3 Plus
phu-PA 546 CG8147-PA 61..532 34..468 841 40.3 Plus
Alp9-PB 517 CG5150-PB 54..517 42..474 838 41.5 Plus
Alp9-PA 517 CG5150-PA 54..517 42..474 838 41.5 Plus
Alp4-PA 596 CG1462-PA 62..541 43..467 799 39 Plus
Alp5-PA 522 CG10827-PA 60..521 39..473 797 40 Plus
Alp10-PA 524 CG10592-PA 45..514 35..467 765 41.3 Plus
Alp4-PB 502 CG1462-PB 1..447 78..467 749 39.9 Plus
Alp6-PA 515 CG1809-PA 38..512 31..467 721 37.4 Plus
Alp12-PE 596 CG16771-PE 112..579 42..467 642 35.3 Plus
Alp12-PD 596 CG16771-PD 112..579 42..467 642 35.3 Plus
Alp12-PC 596 CG16771-PC 112..579 42..467 642 35.3 Plus
Alp12-PB 596 CG16771-PB 112..579 42..467 642 35.3 Plus
Alp12-PA 596 CG16771-PA 112..579 42..467 642 35.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14975-PA 472 GI14975-PA 1..468 3..473 1645 65.3 Plus
Dmoj\GI19038-PA 492 GI19038-PA 9..492 29..475 1057 44.8 Plus
Dmoj\GI19926-PA 530 GI19926-PA 48..528 28..474 1049 44.9 Plus
Dmoj\GI24012-PA 547 GI24012-PA 61..537 36..474 883 41.3 Plus
Dmoj\GI12980-PA 503 GI12980-PA 22..494 42..474 835 38.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16555-PA 491 GL16555-PA 48..489 35..480 1681 70.4 Plus
Dper\GL16939-PA 542 GL16939-PA 61..542 33..477 1045 45 Plus
Dper\GL16938-PA 533 GL16938-PA 51..531 29..475 1041 44.5 Plus
Dper\GL23248-PA 525 GL23248-PA 59..524 36..474 831 40.5 Plus
Dper\GL13536-PA 600 GL13536-PA 52..549 26..467 800 37.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20828-PA 491 GA20828-PA 48..489 35..480 1679 70.4 Plus
Dpse\GA17199-PA 542 GA17199-PA 61..542 33..477 1045 45.1 Plus
Dpse\GA17037-PA 533 GA17037-PA 51..531 29..475 1041 44.5 Plus
Dpse\GA24639-PA 521 GA24639-PA 26..512 28..474 912 41.9 Plus
Dpse\GA20850-PA 543 GA20850-PA 58..527 34..466 846 40.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22557-PA 475 GM22557-PA 1..475 1..483 2395 93.4 Plus
Dsec\GM15653-PA 533 GM15653-PA 52..533 29..475 1041 44.5 Plus
Dsec\GM15654-PA 538 GM15654-PA 57..535 33..477 1014 43.8 Plus
Dsec\GM15655-PA 544 GM15655-PA 62..543 33..476 943 43.1 Plus
Dsec\GM22140-PA 523 GM22140-PA 43..514 42..474 907 40.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17219-PA 480 GD17219-PA 1..478 1..481 2441 95 Plus
Dsim\GD25137-PA 533 GD25137-PA 52..533 29..475 1045 44.9 Plus
Dsim\GD25138-PA 538 GD25138-PA 57..535 33..477 1013 43 Plus
Dsim\GD25139-PA 543 GD25139-PA 62..543 33..477 984 44 Plus
Dsim\GD18617-PA 546 GD18617-PA 61..532 34..468 851 40.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18935-PA 472 GJ18935-PA 27..471 29..476 1681 68.2 Plus
Dvir\GJ15093-PA 529 GJ15093-PA 47..527 28..474 1033 43.4 Plus
Dvir\GJ20005-PA 538 GJ20005-PA 57..538 29..475 1012 45.9 Plus
Dvir\GJ23643-PA 545 GJ23643-PA 48..536 16..474 889 40.1 Plus
Dvir\GJ13123-PA 521 GJ13123-PA 42..512 42..474 875 41.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25319-PA 479 GK25319-PA 34..479 35..478 1713 70.2 Plus
Dwil\GK20836-PA 532 GK20836-PA 51..530 29..474 1043 44.4 Plus
Dwil\GK20837-PA 543 GK20837-PA 58..542 29..474 1002 43.9 Plus
Dwil\GK16996-PA 534 GK16996-PA 54..525 42..474 895 41.6 Plus
Dwil\GK10963-PA 547 GK10963-PA 32..537 16..473 869 39 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17198-PA 482 GE17198-PA 19..475 24..480 2264 91 Plus
Dyak\GE11693-PA 533 GE11693-PA 57..533 33..475 1028 44.4 Plus
Dyak\GE11692-PA 532 GE11692-PA 52..532 29..475 1020 43.2 Plus
Dyak\GE11694-PA 543 GE11694-PA 59..542 30..476 1016 43.6 Plus
Dyak\GE22333-PA 523 GE22333-PA 43..514 42..474 914 41.3 Plus