BDGP Sequence Production Resources |
Search the DGRC for AT01668
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 16 |
Well: | 68 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG42675-RB |
Protein status: | AT01668.pep: gold |
Preliminary Size: | 1773 |
Sequenced Size: | 1706 |
Gene | Date | Evidence |
---|---|---|
CG10999 | 2002-09-24 | Blastp of sequenced clone |
CG10999 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10999 | 2008-04-29 | Release 5.5 accounting |
CG10999 | 2008-08-15 | Release 5.9 accounting |
CG10999 | 2008-12-18 | 5.12 accounting |
1706 bp (1706 high quality bases) assembled on 2002-09-24
GenBank Submission: BT001256
> AT01668.complete GTTCAATCGATTCAGATTTCGGCACCACATAGTGTTTAAGATCTATTGGC AAATTTCAAACGTATTTTCCTTACCTTTCGCGAGTTTTTTCGGTCTAGAT TTGTAGTTTTGTAAATACGATAACCGTTTACTTTAATCGAAGTTGTTCGT TTTTGGCGAGATAAACTGAATTCAATTGGATTGATCGCCACCCACGCCCA ACCACATCCACTGACGCCTCCTGGCGACATTTACTGGCCTGCCTCTGCTG CTGTTGCTGCTGCCGACGACGATTTGTTTGTTTTGTGCCAACTTTGATGA CTCACCGGAGAGACTCAGACTGGAACTGAATCTGAGACTGAGTCTGAGCC GGGTCTGCGGCAGCTAAACAAGCTCAGTCGCGTCATCACCTTGACCAAAG CCCACACACGAGCTCTGCAGCAATCGCATCGAATTCAAACGACTGCCATC GCATCGAACAGACTCCATTTGGCAATGGCGTCACAAGGTTCCGGAGATAT GAAGACCTCAAGGCTGGCGCAAATGCAGATGCGTTTCCAGCAGCGCACGC AACAGGAGCAGGAGGTGCGTAGGCGGGAGCTGATGAGCACGAAGTCAAGT GCCGAGAACCTGGCCACTGGAGCACCCAGTGCCGCCACCACCAGGTTGAT CGGGAATGGGAAAGTGCGCCAGATGTTCGACGAGCGCCGCCGCGGGGCGG GCATTGATCGCAGCAATCCCCTCAAGCCGATCGGCACTCTGCCCTCGCCA CCCGCCCAAACAAAATCTCGCCCGCAGCCCCCAATGCAGCGTCTCGTCAA GGGCGTGGCCGACTTGACCATGCGGGATGCACCAAATGCACCAGGCAGGA GGATCACTAGTGACAGCAATAACAATAAGTTCGCCACGCCCCGCGGGACT TTGAATCGCAACCTTAAGCCCGTGGTCACCCGCAAGACACCGCCGGCCCA GGAGACCACGCTCCACCAACGTTCTCCCGCGCCACAACGCAGTCCCAAGA TTCAGGCGACCCAACGAGTAAGTGGAGGAACCGGTGCTGCCCCGACAGCC GGTCGTCTTTCGCCACCATTTGTTCGACGGGCGGAACCCAAATCACCAGT TAAAAAGGTCAACATGGACACAACGACTGCAATCCCAGAGGGCACCGCTT TATGCCGCTACTGCGGACGCCACTTCAACACGGATCGTCTGGCGAAGCAC GAGGAGGTGTGCCAGCGCATGCTGACCACCAAACGCAAGATATTCGATGC CTCCAAGCAGCGGATCGAGGGCACCGAGGCCGCGGCGTTCAATATGAAGT CGAAGGGCAATCGCAACCGTTCAACTTACAGTAGTGCTGCCCAGCAGAAG GGTCTGACCACTGGAGTGAAGAAGAACAACTGGCGTAAGAAGCACGAGGA CTTCATTCAGTCGATTAGAGCGGCCAAGCAGGTGAAGGCGCACTTGGCGC GCGGCGGCAAGTTGAGCGACCTGCCACCACCGCCACCTTCGGAGAATCCA GACTATGTCCAGTGTCCCCACTGTGGTCGCCGATTCAACGAACAGGCTGC GGAGCGTCATATCCCCAAGTGCGTTAACATGGTGCACAACAAGCCCCGTA ACGGTCCGCCGGCCAAGAGGCGTTGAGTGGTGATTGGGAATAGATATTCG CCCATTCTTTTACTTGTGATAAAGAAGTTTTATGATTGAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10999-RA | 1724 | CG10999-RA | 29..1719 | 1..1691 | 8455 | 100 | Plus |
CG10999-RB | 1773 | CG10999-RB | 260..1768 | 183..1691 | 7545 | 100 | Plus |
CG10999-RC | 652 | CG10999-RC | 36..647 | 1080..1691 | 3060 | 100 | Plus |
CG10999-RB | 1773 | CG10999-RB | 1..171 | 13..183 | 855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1643895..1644467 | 1116..1688 | 2865 | 100 | Plus |
chr3R | 27901430 | chr3R | 1643160..1643715 | 526..1081 | 2780 | 100 | Plus |
chr3R | 27901430 | chr3R | 1640585..1640930 | 183..528 | 1730 | 100 | Plus |
chr3R | 27901430 | chr3R | 1640314..1640496 | 1..183 | 915 | 100 | Plus |
chr3R | 27901430 | chr3R | 1643798..1643835 | 1080..1117 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5818248..5818823 | 1116..1691 | 2880 | 100 | Plus |
3R | 32079331 | 3R | 5817513..5818068 | 526..1081 | 2780 | 100 | Plus |
3R | 32079331 | 3R | 5814938..5815283 | 183..528 | 1730 | 100 | Plus |
3R | 32079331 | 3R | 5814667..5814849 | 1..183 | 915 | 100 | Plus |
3R | 32079331 | 3R | 5818151..5818188 | 1080..1117 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5559079..5559654 | 1116..1691 | 2880 | 100 | Plus |
3R | 31820162 | 3R | 5558344..5558899 | 526..1081 | 2780 | 100 | Plus |
3R | 31820162 | 3R | 5555769..5556114 | 183..528 | 1730 | 100 | Plus |
3R | 31820162 | 3R | 5555498..5555680 | 1..183 | 915 | 100 | Plus |
3R | 31820162 | 3R | 5558982..5559019 | 1080..1117 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 699..729 | 239..269 | 119 | 87.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1640314..1640496 | 1..183 | 100 | -> | Plus |
chr3R | 1640586..1640930 | 184..528 | 100 | -> | Plus |
chr3R | 1643163..1643714 | 529..1080 | 100 | -> | Plus |
chr3R | 1643799..1643834 | 1081..1116 | 100 | -> | Plus |
chr3R | 1643896..1644467 | 1117..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10999-RB | 1..1152 | 475..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RF | 1..1152 | 475..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RB | 1..1152 | 475..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10999-RB | 1..1152 | 475..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RB | 1..1152 | 475..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10999-RA | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RB | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RB | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10999-RA | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42675-RB | 1..1688 | 1..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5814667..5814849 | 1..183 | 100 | -> | Plus |
3R | 5814939..5815283 | 184..528 | 100 | -> | Plus |
3R | 5817516..5818067 | 529..1080 | 100 | -> | Plus |
3R | 5818152..5818187 | 1081..1116 | 100 | -> | Plus |
3R | 5818249..5818820 | 1117..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5814667..5814849 | 1..183 | 100 | -> | Plus |
3R | 5814939..5815283 | 184..528 | 100 | -> | Plus |
3R | 5817516..5818067 | 529..1080 | 100 | -> | Plus |
3R | 5818152..5818187 | 1081..1116 | 100 | -> | Plus |
3R | 5818249..5818820 | 1117..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5814667..5814849 | 1..183 | 100 | -> | Plus |
3R | 5814939..5815283 | 184..528 | 100 | -> | Plus |
3R | 5817516..5818067 | 529..1080 | 100 | -> | Plus |
3R | 5818152..5818187 | 1081..1116 | 100 | -> | Plus |
3R | 5818249..5818820 | 1117..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1640389..1640571 | 1..183 | 100 | -> | Plus |
arm_3R | 1640661..1641005 | 184..528 | 100 | -> | Plus |
arm_3R | 1643238..1643789 | 529..1080 | 100 | -> | Plus |
arm_3R | 1643874..1643909 | 1081..1116 | 100 | -> | Plus |
arm_3R | 1643971..1644542 | 1117..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5555770..5556114 | 184..528 | 100 | -> | Plus |
3R | 5558347..5558898 | 529..1080 | 100 | -> | Plus |
3R | 5558983..5559018 | 1081..1116 | 100 | -> | Plus |
3R | 5559080..5559651 | 1117..1688 | 100 | Plus | |
3R | 5555498..5555680 | 1..183 | 100 | -> | Plus |
Translation from 474 to 1625
> AT01668.hyp MASQGSGDMKTSRLAQMQMRFQQRTQQEQEVRRRELMSTKSSAENLATGA PSAATTRLIGNGKVRQMFDERRRGAGIDRSNPLKPIGTLPSPPAQTKSRP QPPMQRLVKGVADLTMRDAPNAPGRRITSDSNNNKFATPRGTLNRNLKPV VTRKTPPAQETTLHQRSPAPQRSPKIQATQRVSGGTGAAPTAGRLSPPFV RRAEPKSPVKKVNMDTTTAIPEGTALCRYCGRHFNTDRLAKHEEVCQRML TTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTTGVKK NNWRKKHEDFIQSIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHC GRRFNEQAAERHIPKCVNMVHNKPRNGPPAKRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42675-PF | 383 | CG42675-PF | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PC | 383 | CG10999-PB | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PB | 383 | CG10999-PA | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PE | 412 | CG42675-PE | 35..412 | 6..383 | 1920 | 97.1 | Plus |
CG42675-PG | 427 | CG42675-PG | 63..427 | 19..383 | 1918 | 100 | Plus |
Translation from 474 to 1625
> AT01668.pep MASQGSGDMKTSRLAQMQMRFQQRTQQEQEVRRRELMSTKSSAENLATGA PSAATTRLIGNGKVRQMFDERRRGAGIDRSNPLKPIGTLPSPPAQTKSRP QPPMQRLVKGVADLTMRDAPNAPGRRITSDSNNNKFATPRGTLNRNLKPV VTRKTPPAQETTLHQRSPAPQRSPKIQATQRVSGGTGAAPTAGRLSPPFV RRAEPKSPVKKVNMDTTTAIPEGTALCRYCGRHFNTDRLAKHEEVCQRML TTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTTGVKK NNWRKKHEDFIQSIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHC GRRFNEQAAERHIPKCVNMVHNKPRNGPPAKRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16356-PA | 389 | GF16356-PA | 1..388 | 1..383 | 1322 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13059-PA | 382 | GG13059-PA | 1..382 | 1..383 | 1750 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13179-PA | 380 | GH13179-PA | 1..373 | 1..379 | 1034 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42675-PF | 383 | CG42675-PF | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PC | 383 | CG10999-PB | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PB | 383 | CG10999-PA | 1..383 | 1..383 | 2005 | 100 | Plus |
CG42675-PE | 412 | CG42675-PE | 35..412 | 6..383 | 1920 | 97.1 | Plus |
CG42675-PG | 427 | CG42675-PG | 63..427 | 19..383 | 1918 | 100 | Plus |
CG42675-PD | 187 | CG10999-PC | 6..187 | 202..383 | 978 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22365-PA | 424 | GI22365-PA | 1..417 | 1..379 | 955 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24325-PA | 466 | GL24325-PA | 108..460 | 19..378 | 1042 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26574-PA | 380 | GA26574-PA | 1..374 | 1..378 | 1127 | 62 | Plus |
Dpse\GA26574-PB | 423 | GA26574-PB | 66..417 | 19..378 | 1086 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10844-PA | 383 | GM10844-PA | 1..383 | 1..383 | 1896 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19826-PA | 455 | GD19826-PA | 91..455 | 19..383 | 1821 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24399-PA | 385 | GJ24399-PA | 1..374 | 1..375 | 1036 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22541-PA | 461 | GK22541-PA | 93..456 | 19..379 | 922 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10169-PA | 378 | GE10169-PA | 1..378 | 1..383 | 1719 | 87.8 | Plus |