Clone AT01695 Report

Search the DGRC for AT01695

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:16
Well:95
Vector:pOTB7
Associated Gene/TranscriptCG16984-RA
Protein status:AT01695.pep: gold
Preliminary Size:983
Sequenced Size:1146

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16984 2002-01-01 Sim4 clustering to Release 2
CG16984 2002-02-22 Blastp of sequenced clone
CG16984 2003-01-01 Sim4 clustering to Release 3
CG16984 2008-04-29 Release 5.5 accounting
CG16984 2008-08-15 Release 5.9 accounting
CG16984 2008-12-18 5.12 accounting

Clone Sequence Records

AT01695.complete Sequence

1146 bp (1146 high quality bases) assembled on 2002-02-22

GenBank Submission: AY094628

> AT01695.complete
GTAAACTAGCACGCTTTCGAGTTCCCTACCTTCATCCTTACATATTTGTA
TTACAATGTCCCTGGTTTATATCACCCATCACGATGAGAATATTCTCGAG
TGCGAGCAGGACTTTGTGAAGGCCCAAGGACCTAAGGAATCAATTTTTGT
CTACAAAAATCCTGTTGTGGAGAGGGCAGCCAAGTATGCCAAGAGACTTC
GCGAACGCTTTAACGAGGAGGACAAGAAGCTATCGATTATCCTCCAGAAC
GATGGAACCCGCGTCCTGACAGAGGCCAAGAAATCAGCCCACCGCACCAT
GGGCTGTGCTCACACTCCGATTGACCCACCGTGCGCCTATTTGCGCAAGA
GCCAGGGCATCAAATGGCGGCGAGAGAACACCCACAAGTGTCCCAAGATG
CCGCCAATGCCCCCACTACCACCACCGGGCAGTGGCGGCAAAAAGCCGGC
AATGGTACCTAACTTCATCAAACGCAACAAGATATGTGCCGGACAAACGG
TTCCCTGTCCCCCGCCACCTCGTTATGTAGACACTCCCGTGGGAGCTCGT
CACGATCTACTCAATTCCGGATTGGTACCGCAGTTTATCTGCCGCAAGGA
TTTCGGCAAGGTGCCTGTTTACCTCAAGAAAACCAAGAGGATGTTGGCCG
ACATGAATGCGGTGTGTGCCAAGGAACAGGCACGTTTGCTGGAGCTGTGC
CGCGGTATCAAGGGTTTCACCAGGGCATCCGTCCAATCAAGTGGTCCGCC
GCCAATGCCGGGTATGCGGGTGATGGAGCAGGCCGAGCGAAATGAGATCC
TCGAGGGACTGCGACTGAGCCTGACCGAGATGACCAAGCAGTATCAGTCG
ATGTCGCTCCTTATCGACAGCATCGCCAAGCGGCAGCGCAAAAGCAAGCT
GGAGTCCGATCTTCGCCAGGTGGAGCAGGACATTCTGCTAATCGAGACCA
CTCCCATTATCTATGTTTCCGAGTACTAACAATGACACACACACCTTTTC
TGACCATGTGTGTCGGCATCTGGAAGCCGAGTGAGGTGTCTCCATGGATT
CACTTGCTTTGCTCTTAGAGGCGGACACACAAAACACTTCGTAATTAAGA
TTGAGAATAAATTTAACGTTTATGCATTAAAAAAAAAAAAAAAAAA

AT01695.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-RA 1324 CG16984-RA 194..1324 1..1131 5655 100 Plus
CG12182-RA 2368 CG12182-RA 2325..2368 1131..1088 220 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:52:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2595542..2596508 162..1128 4835 100 Plus
chr3L 24539361 chr3L 2595325..2595485 1..161 805 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:37:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2596032..2597001 162..1131 4850 100 Plus
3L 28110227 3L 2595815..2595975 1..161 805 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 2596032..2597001 162..1131 4850 100 Plus
3L 28103327 3L 2595815..2595975 1..161 805 100 Plus
Blast to na_te.dros performed on 2019-03-16 22:52:38 has no hits.

AT01695.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:53:46 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2595325..2595485 1..161 100 -> Plus
chr3L 2595542..2596508 162..1128 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:48:22 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 56..979 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:44:32 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 56..979 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:14:32 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 56..979 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:12:30 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 56..979 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:44:28 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 1..924 56..979 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:09:04 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 3..1130 1..1128 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:44:31 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 3..1130 1..1128 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:14:32 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 35..1162 1..1128 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:12:30 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 3..1130 1..1128 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:44:28 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
CG16984-RA 35..1162 1..1128 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:53:46 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2595815..2595975 1..161 100 -> Plus
3L 2596032..2596998 162..1128 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:53:46 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2595815..2595975 1..161 100 -> Plus
3L 2596032..2596998 162..1128 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:53:46 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2595815..2595975 1..161 100 -> Plus
3L 2596032..2596998 162..1128 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:14:32 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2595815..2595975 1..161 100 -> Plus
arm_3L 2596032..2596998 162..1128 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:47:07 Download gff for AT01695.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2596032..2596998 162..1128 100   Plus
3L 2595815..2595975 1..161 100 -> Plus

AT01695.hyp Sequence

Translation from 55 to 978

> AT01695.hyp
MSLVYITHHDENILECEQDFVKAQGPKESIFVYKNPVVERAAKYAKRLRE
RFNEEDKKLSIILQNDGTRVLTEAKKSAHRTMGCAHTPIDPPCAYLRKSQ
GIKWRRENTHKCPKMPPMPPLPPPGSGGKKPAMVPNFIKRNKICAGQTVP
CPPPPRYVDTPVGARHDLLNSGLVPQFICRKDFGKVPVYLKKTKRMLADM
NAVCAKEQARLLELCRGIKGFTRASVQSSGPPPMPGMRVMEQAERNEILE
GLRLSLTEMTKQYQSMSLLIDSIAKRQRKSKLESDLRQVEQDILLIETTP
IIYVSEY*

AT01695.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-PA 307 CG16984-PA 1..307 1..307 1617 100 Plus

AT01695.pep Sequence

Translation from 55 to 978

> AT01695.pep
MSLVYITHHDENILECEQDFVKAQGPKESIFVYKNPVVERAAKYAKRLRE
RFNEEDKKLSIILQNDGTRVLTEAKKSAHRTMGCAHTPIDPPCAYLRKSQ
GIKWRRENTHKCPKMPPMPPLPPPGSGGKKPAMVPNFIKRNKICAGQTVP
CPPPPRYVDTPVGARHDLLNSGLVPQFICRKDFGKVPVYLKKTKRMLADM
NAVCAKEQARLLELCRGIKGFTRASVQSSGPPPMPGMRVMEQAERNEILE
GLRLSLTEMTKQYQSMSLLIDSIAKRQRKSKLESDLRQVEQDILLIETTP
IIYVSEY*

AT01695.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24236-PA 308 GF24236-PA 1..308 1..307 1321 81.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14874-PA 307 GG14874-PA 1..307 1..307 1472 92.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16392-PA 309 GH16392-PA 1..309 1..307 1008 62 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG16984-PA 307 CG16984-PA 1..307 1..307 1617 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12475-PA 309 GI12475-PA 1..309 1..307 999 62 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22457-PA 311 GL22457-PA 1..311 1..307 1181 70.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:44:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14256-PA 311 GA14256-PA 1..311 1..307 1171 70.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:44:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14497-PA 307 GM14497-PA 1..307 1..307 1622 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13694-PA 307 GD13694-PA 1..307 1..307 1622 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12376-PA 309 GJ12376-PA 1..309 1..307 1030 64.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12655-PA 314 GK12655-PA 1..314 1..307 1040 62.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20326-PA 307 GE20326-PA 1..307 1..307 1485 93.8 Plus