BDGP Sequence Production Resources |
Search the DGRC for AT01712
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 17 |
Well: | 12 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG11125-RA |
Protein status: | AT01712.pep: gold |
Preliminary Size: | 1218 |
Sequenced Size: | 1522 |
Gene | Date | Evidence |
---|---|---|
CG11125 | 2004-02-02 | Blastp of sequenced clone |
CG11125 | 2008-04-29 | Release 5.5 accounting |
CG11125 | 2008-08-15 | Release 5.9 accounting |
CG11125 | 2008-12-18 | 5.12 accounting |
1522 bp (1522 high quality bases) assembled on 2004-02-02
GenBank Submission: BT011568
> AT01712.complete ACACAACGACGCAGTTTCCACTTGTCGTAGTCGAGATCACATTTCTGGAG CCCCAGCCGTCTAGTTATAGTTCGGGAGTAGGTGGAACATGTCGAATACT TCAGTTCGCCCGATTCCAACGTTAAAGGGCATCTTTTCGGTGCCGCGCGT CACACAGTCCCGAAACTTCCTCAAGGAAAACAAGGTGAGCCTGCGCTCGC TGGAAAAGTCCACCAGCCAGAAGTTGGCCGCTAAGGAGCCGACGCGCCCG AAATGGATGCCCCCGCTGCGACGCTCTTCCTCCGTGATGGGAGACTCAAA GGCGGAGAAACCAGCAGCTAAGGGCAAAACTATAAAACAGAACTCGTTGC AAAATGGCCGCAGCACCTCTCGCTCACAGCACCAACTGGCCGTGGCCGTT CCGGCGGAGGGGGAACGCTTCGATGGCCTGGAGGAGCGCAATCCCATCTT ATATGACCCGTCGGAGAACTTAGAATCCGAGAATCTCCAAGAGCCTTCGT CGGATACAGACATTGATCGCTGTCAATCGTGTGGCACGAATCGGAGCTCC ACCAGCATAGCCATCCAAACTGAGGACATTACCGACGAACTCTATCTAAC AAATGCTCTGAAGAAATGTAACTTTGATGCCAGATCTATACTGGAGGAAT CCGGTGCAAAATACGGGGAAAACTACAAACCCATGCAATATGAAAACGAG GAAGATTTGGAACAGTTGCCGCTTTCGGCGCGTTCGAACTCCTCGAAGCA GAGTCGCTTCAACATGTCCGAAATGGAGGCTATGCCCATGACCGAGGCCG AACCTGCAAACTACGGCGCCTCAGACGACGAGGCTCCACTCAGTGCCCGT AGTCGTTTCACAACGGCCTCCAATGTCACCACCATAAGCTCTAAGTCAAA GCGTCGTGAGCATAAACTAGGATCCCGAGATGAGGTGCGCTTGCCGCGTT ACCTGGAAAAGCAGAAGCGCGAGAAGGCGGTGGCCAAGCAGCTTGCGGAA TCGCTGGATCCCGACTGTCCGCGTGGCCATGTGTTGCTCAGCGATCAGGA CCGACTGACGCACCTCACTAATGCTAAGAAACGCTACGAACAGCTGGTTA ATGAACTGAACCACATGCCCATGACTGCACAGACGTTGAGGGTGCGCAAC CGCAAGGCGGAGATCGACAAGGAGCTGACCACCGTGGAGGAGGACATCCG CATATACTCCAAGGCAAAGGTCTTCGTGCTGGCCAGCAAGTCGCGACAGT TGTGAGAACTCATGCTACATAGCTCCCAAAAACATTAAAGCATTCCATCG ACTGACTGACCGAGCGAGCTACTGGAATCTTGGATTTGCAAAACACGCGT GTTCCTTTCAACCATGCCTTACGTTAATAATATATTTTTTAGCTGAGATT TGGATCGCAGACCTACCCCGCCCCGATAGCATTGTGACCAACTTAACGTG CGATCCAGTCGACCAGCAACTAGAGTTACAGATTAAAAACCGCTCATCCA ACTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11125-RA | 1691 | CG11125-RA | 175..1679 | 1..1505 | 7510 | 99.9 | Plus |
CG11125.a | 1615 | CG11125.a | 88..1010 | 1..923 | 4600 | 99.8 | Plus |
CG11125-RB | 1660 | CG11125-RB | 759..1648 | 616..1505 | 4450 | 100 | Plus |
CG11125-RB | 1660 | CG11125-RB | 88..712 | 1..625 | 3065 | 99.3 | Plus |
CG11125.a | 1615 | CG11125.a | 1035..1615 | 924..1504 | 2905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3335141..3335619 | 147..625 | 2335 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 3336348..3336769 | 1083..1504 | 2110 | 100 | Plus |
chr2R | 21145070 | chr2R | 3335666..3335973 | 616..923 | 1540 | 100 | Plus |
chr2R | 21145070 | chr2R | 3336137..3336296 | 924..1083 | 800 | 100 | Plus |
chr2R | 21145070 | chr2R | 3334920..3335066 | 1..147 | 735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7447787..7448265 | 147..625 | 2335 | 99.2 | Plus |
2R | 25286936 | 2R | 7448994..7449416 | 1083..1505 | 2115 | 100 | Plus |
2R | 25286936 | 2R | 7448312..7448619 | 616..923 | 1540 | 100 | Plus |
2R | 25286936 | 2R | 7448783..7448942 | 924..1083 | 800 | 100 | Plus |
2R | 25286936 | 2R | 7447566..7447712 | 1..147 | 735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7448986..7449464 | 147..625 | 2335 | 99.1 | Plus |
2R | 25260384 | 2R | 7450193..7450615 | 1083..1505 | 2115 | 100 | Plus |
2R | 25260384 | 2R | 7449511..7449818 | 616..923 | 1540 | 100 | Plus |
2R | 25260384 | 2R | 7449982..7450141 | 924..1083 | 800 | 100 | Plus |
2R | 25260384 | 2R | 7448765..7448911 | 1..147 | 735 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3334920..3335065 | 1..146 | 100 | -> | Plus |
chr2R | 3335141..3335609 | 147..615 | 99 | -> | Plus |
chr2R | 3335666..3335973 | 616..923 | 100 | -> | Plus |
chr2R | 3336137..3336295 | 924..1082 | 100 | -> | Plus |
chr2R | 3336348..3336769 | 1083..1504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 1..1167 | 89..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 1..1167 | 89..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 1..1167 | 89..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 1..1167 | 89..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 1..1167 | 89..1255 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 88..1591 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 88..1586 | 1..1499 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 94..1597 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 88..1591 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11125-RA | 94..1597 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7447566..7447711 | 1..146 | 100 | -> | Plus |
2R | 7447787..7448255 | 147..615 | 99 | -> | Plus |
2R | 7448312..7448619 | 616..923 | 100 | -> | Plus |
2R | 7448783..7448941 | 924..1082 | 100 | -> | Plus |
2R | 7448994..7449415 | 1083..1504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7447566..7447711 | 1..146 | 100 | -> | Plus |
2R | 7447787..7448255 | 147..615 | 99 | -> | Plus |
2R | 7448312..7448619 | 616..923 | 100 | -> | Plus |
2R | 7448783..7448941 | 924..1082 | 100 | -> | Plus |
2R | 7448994..7449415 | 1083..1504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7447566..7447711 | 1..146 | 100 | -> | Plus |
2R | 7447787..7448255 | 147..615 | 99 | -> | Plus |
2R | 7448312..7448619 | 616..923 | 100 | -> | Plus |
2R | 7448783..7448941 | 924..1082 | 100 | -> | Plus |
2R | 7448994..7449415 | 1083..1504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3335071..3335216 | 1..146 | 100 | -> | Plus |
arm_2R | 3335292..3335760 | 147..615 | 99 | -> | Plus |
arm_2R | 3335817..3336124 | 616..923 | 100 | -> | Plus |
arm_2R | 3336288..3336446 | 924..1082 | 100 | -> | Plus |
arm_2R | 3336499..3336920 | 1083..1504 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7448986..7449454 | 147..615 | 99 | -> | Plus |
2R | 7449511..7449818 | 616..923 | 100 | -> | Plus |
2R | 7449982..7450140 | 924..1082 | 100 | -> | Plus |
2R | 7450193..7450614 | 1083..1504 | 100 | Plus | |
2R | 7448765..7448910 | 1..146 | 100 | -> | Plus |
Translation from 88 to 1254
> AT01712.hyp MSNTSVRPIPTLKGIFSVPRVTQSRNFLKENKVSLRSLEKSTSQKLAAKE PTRPKWMPPLRRSSSVMGDSKAEKPAAKGKTIKQNSLQNGRSTSRSQHQL AVAVPAEGERFDGLEERNPILYDPSENLESENLQEPSSDTDIDRCQSCGT NRSSTSIAIQTEDITDELYLTNALKKCNFDARSILEESGAKYGENYKPMQ YENEEDLEQLPLSARSNSSKQSRFNMSEMEAMPMTEAEPANYGASDDEAP LSARSRFTTASNVTTISSKSKRREHKLGSRDEVRLPRYLEKQKREKAVAK QLAESLDPDCPRGHVLLSDQDRLTHLTNAKKRYEQLVNELNHMPMTAQTL RVRNRKAEIDKELTTVEEDIRIYSKAKVFVLASKSRQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11125-PC | 388 | CG11125-PC | 1..388 | 1..388 | 1959 | 100 | Plus |
CG11125-PA | 388 | CG11125-PA | 1..388 | 1..388 | 1959 | 100 | Plus |
CG32591-PB | 392 | CG32591-PB | 12..383 | 25..375 | 174 | 23.8 | Plus |
CG32591-PA | 392 | CG32591-PA | 12..383 | 25..375 | 174 | 23.8 | Plus |
Translation from 88 to 1254
> AT01712.pep MSNTSVRPIPTLKGIFSVPRVTQSRNFLKENKVSLRSLEKSTSQKLAAKE PTRPKWMPPLRRSSSVMGDSKAEKPAAKGKTIKQNSLQNGRSTSRSQHQL AVAVPAEGERFDGLEERNPILYDPSENLESENLQEPSSDTDIDRCQSCGT NRSSTSIAIQTEDITDELYLTNALKKCNFDARSILEESGAKYGENYKPMQ YENEEDLEQLPLSARSNSSKQSRFNMSEMEAMPMTEAEPANYGASDDEAP LSARSRFTTASNVTTISSKSKRREHKLGSRDEVRLPRYLEKQKREKAVAK QLAESLDPDCPRGHVLLSDQDRLTHLTNAKKRYEQLVNELNHMPMTAQTL RVRNRKAEIDKELTTVEEDIRIYSKAKVFVLASKSRQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12958-PA | 391 | GF12958-PA | 1..391 | 1..388 | 1406 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23280-PA | 388 | GG23280-PA | 1..388 | 1..388 | 1843 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21167-PA | 382 | GH21167-PA | 1..382 | 1..388 | 998 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11125-PC | 388 | CG11125-PC | 1..388 | 1..388 | 1959 | 100 | Plus |
CG11125-PA | 388 | CG11125-PA | 1..388 | 1..388 | 1959 | 100 | Plus |
CG32591-PB | 392 | CG32591-PB | 12..383 | 25..375 | 174 | 23.8 | Plus |
CG32591-PA | 392 | CG32591-PA | 12..383 | 25..375 | 174 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18762-PA | 405 | GI18762-PA | 1..405 | 1..388 | 963 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10503-PA | 380 | GL10503-PA | 1..378 | 1..384 | 1234 | 63.6 | Plus |
Dper\GL22969-PA | 356 | GL22969-PA | 1..354 | 1..384 | 857 | 49.4 | Plus |
Dper\GL14354-PA | 315 | GL14354-PA | 1..309 | 1..361 | 638 | 44.3 | Plus |
Dper\GL14160-PA | 313 | GL14160-PA | 1..311 | 1..384 | 636 | 41.7 | Plus |
Dper\GL25476-PA | 98 | GL25476-PA | 11..96 | 290..384 | 257 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10774-PA | 382 | GA10774-PA | 1..380 | 1..384 | 1220 | 63.8 | Plus |
Dpse\GA22281-PA | 356 | GA22281-PA | 1..354 | 1..384 | 854 | 49.7 | Plus |
Dpse\GA22381-PA | 345 | GA22381-PA | 1..343 | 12..384 | 833 | 49.3 | Plus |
Dpse\GA22989-PA | 317 | GA22989-PA | 1..311 | 1..361 | 609 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20956-PA | 388 | GM20956-PA | 1..388 | 1..388 | 1969 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10481-PA | 388 | GD10481-PA | 1..388 | 1..388 | 1975 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21786-PA | 387 | GJ21786-PA | 1..387 | 1..388 | 1005 | 55.5 | Plus |
Dvir\GJ16940-PA | 376 | GJ16940-PA | 107..363 | 159..380 | 151 | 22.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21321-PA | 357 | GK21321-PA | 1..357 | 1..388 | 976 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19127-PA | 390 | GE19127-PA | 1..390 | 1..388 | 1842 | 91.8 | Plus |