BDGP Sequence Production Resources |
Search the DGRC for AT01767
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 17 |
Well: | 67 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG6479-RB |
Protein status: | AT01767.pep: gold |
Sequenced Size: | 1816 |
Gene | Date | Evidence |
---|---|---|
CG6479-RB | 2009-06-22 | Replacement based on scoring |
1816 bp assembled on 2009-09-21
GenBank Submission: BT099772.1
> AT01767.complete TAGAATTCAGAAAATTAACCCATGAATGCTCCTCAGCTCGCCGCTGAGTA AAAACCCAGTGGTGCAGCGCAGCCTGGACTTGCGATTGCAGGGCGCCCAA GCGCGGCATTACCTCAAGTGGTGCTCCATAAATGTGGTGCTGCTGTCGCT ACTCCTCTTCGACCTCTGGCAGGCATGTCGGTCCGCCTACAGGACCTACT GGTTCCTGGCGGAGTGCACCATTACGACCCTGATTGGCCTAAGTGCACTC GCCTGCTTCGGCAAGTATTTGTGGTTATGGTTTGGTGGTGACCAAGTTAC GGGTAGCGATATCCAAAAGTGGCTGCTTGATGGCAAGGCAGAGAACTCTT TTCGTACAGTTTGCTCCCGAGCCGTGATGAAACCACGCAGCTACGAACCG GATAGCGATATAGAGGACGACATACCCATCATCAACTGGCACTCCTCCTT CGAGGACTCCTGCTGGGGCTCGCAATCCATGCGCCGCAGCCCCAGTCCCA CAAGGACGCCGCAGCAGACGAAACAAAACACCTCTTACAACTCCTCGATG GTTCGAAACAACTCGCTGAATGCCAGCAATCTGAGCAACGAGTCTACCTA TATGTCCCCGTATGCGGAGGTGCGACGCGATGACTTCATGACCGATACAC GAAAGTTGACCAGTCTAATGAAGCAGGCGGATCGGGAGCGCAGCATGATG GACAGCTCGGATACACCCAATGTGCAGAGCATGGGATCGGCCAACTCCTT CTGGAATTACTGCAACAATGCGGCCTATATGCTCAAGACCACCATCTATC AACTATCGCCACCTCCGGCTGTTTCTACGGAAAATGCTCCCACCTCGATT GAGGAGTTTGGCGGTATTCAGTTTAGGGACAGCAATTCGGAGGTCATCAA GCGCATATCCACGGACAAACTGTCGCAATATGTGGCCAACCTAAGATTTT GGATTTCTACGACCATACTTCAGCGTTTGGTCAAAGAGATCAATTATGTG GACGATGTTTTCCGCCAGCGAGCTCTGATTGACATTAAAATTGGATCTGT GAGTGTAGAGAGATTACGCAAAACAGCCGAGAACCAGCAGTTCGTGCAGA CGTGTGCGCCCATGTTGCCCATGCTCTTACCTTTCCTGGACACCTTCAGC AACCAGGAATACCTGGTGCAGCGCATCAAGGAGCTTGCGCAGGGCTCTTG CATAGCTGACTACCGCTGGTACTCGGGCAAAACACACAACGGTCAGCAGC GGGACGAGCATTTGCCCACCGATGCAGCTATAATATTCCATTTATTTTGC GTGTACTTGGATAGCCAGTTGATGCCGTTGCCGCAGGGCGGCGGACGACC CTTTCACTCCCGCTACGTGTTAATTCGCGACGAGAAGAGCTCGACCAAGG ACGTGGTGAACGCAGTTCACAACAAGGCCCACTGCGCCATTTTAAGTACC GGCAACCCACTTAACCCTAAATTTAACTTTATCAGCGACAAAGAACTACA CAACTGCGTCTACGATAGGAATAACCTGTTCTACGTTATCATACAGTTCC TAATTTATATGCGACAGCACCAGGACTCTGCTCTGGAGTGCGTAAATCTT GGCAAGAGTGGTATCAACATCATGTGCGTCATCGAAGACTGAACTGTGGA TCTAGTCGGCCGTGGCTATGACTTTTAACCCGACCCCTAATCACTCGTTA TTTCTAAGCATGATCCTTTGTGACTCGACTATCGTTTGGTGACTGGACAA TCCTCATCATTCGTTACTATGAAATTATACATTTGTAATTATTAAGCCAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6479-RB | 1892 | CG6479-RB | 20..1812 | 1..1800 | 8735 | 99.1 | Plus |
CG6479-RA | 2022 | CG6479-RA | 117..1874 | 36..1800 | 8560 | 99 | Plus |
CG6479.a | 2004 | CG6479.a | 420..1856 | 357..1800 | 6955 | 98.8 | Plus |
CG6479.a | 2004 | CG6479.a | 117..422 | 36..341 | 1530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17327576..17328185 | 949..340 | 3035 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 17326619..17327130 | 1798..1280 | 2380 | 97.7 | Minus |
chr3L | 24539361 | chr3L | 17328243..17328583 | 341..1 | 1705 | 100 | Minus |
chr3L | 24539361 | chr3L | 17327190..17327519 | 1279..950 | 1650 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17338129..17338738 | 949..340 | 3035 | 99.8 | Minus |
3L | 28110227 | 3L | 17337170..17337683 | 1800..1280 | 2345 | 97.1 | Minus |
3L | 28110227 | 3L | 17338796..17339136 | 341..1 | 1705 | 100 | Minus |
3L | 28110227 | 3L | 17337743..17338072 | 1279..950 | 1650 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17331229..17331838 | 949..340 | 3035 | 99.8 | Minus |
3L | 28103327 | 3L | 17330270..17330783 | 1800..1280 | 2355 | 97.1 | Minus |
3L | 28103327 | 3L | 17331896..17332236 | 341..1 | 1705 | 100 | Minus |
3L | 28103327 | 3L | 17330843..17331172 | 1279..950 | 1650 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17326619..17327130 | 1280..1798 | 97 | <- | Minus |
chr3L | 17327190..17327519 | 950..1279 | 100 | <- | Minus |
chr3L | 17327576..17328183 | 342..949 | 99 | <- | Minus |
chr3L | 17328243..17328583 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1617 | 26..1642 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1617 | 26..1642 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1617 | 26..1642 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1617 | 26..1642 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1791 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1791 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1791 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6479-RB | 1..1791 | 1..1798 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17337172..17337683 | 1280..1798 | 97 | <- | Minus |
3L | 17337743..17338072 | 950..1279 | 100 | <- | Minus |
3L | 17338129..17338736 | 342..949 | 99 | <- | Minus |
3L | 17338796..17339136 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17337172..17337683 | 1280..1798 | 97 | <- | Minus |
3L | 17337743..17338072 | 950..1279 | 100 | <- | Minus |
3L | 17338129..17338736 | 342..949 | 99 | <- | Minus |
3L | 17338796..17339136 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17337172..17337683 | 1280..1798 | 97 | <- | Minus |
3L | 17337743..17338072 | 950..1279 | 100 | <- | Minus |
3L | 17338129..17338736 | 342..949 | 99 | <- | Minus |
3L | 17338796..17339136 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17330272..17330783 | 1280..1798 | 97 | <- | Minus |
arm_3L | 17330843..17331172 | 950..1279 | 100 | <- | Minus |
arm_3L | 17331229..17331836 | 342..949 | 99 | <- | Minus |
arm_3L | 17331896..17332236 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17330272..17330783 | 1280..1798 | 97 | <- | Minus |
3L | 17330843..17331172 | 950..1279 | 100 | <- | Minus |
3L | 17331229..17331836 | 342..949 | 99 | <- | Minus |
3L | 17331896..17332236 | 1..341 | 100 | Minus |
Translation from 25 to 1641
> AT01767.pep MLLSSPLSKNPVVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQA CRSAYRTYWFLAECTITTLIGLSALACFGKYLWLWFGGDQVTGSDIQKWL LDGKAENSFRTVCSRAVMKPRSYEPDSDIEDDIPIINWHSSFEDSCWGSQ SMRRSPSPTRTPQQTKQNTSYNSSMVRNNSLNASNLSNESTYMSPYAEVR RDDFMTDTRKLTSLMKQADRERSMMDSSDTPNVQSMGSANSFWNYCNNAA YMLKTTIYQLSPPPAVSTENAPTSIEEFGGIQFRDSNSEVIKRISTDKLS QYVANLRFWISTTILQRLVKEINYVDDVFRQRALIDIKIGSVSVERLRKT AENQQFVQTCAPMLPMLLPFLDTFSNQEYLVQRIKELAQGSCIADYRWYS GKTHNGQQRDEHLPTDAAIIFHLFCVYLDSQLMPLPQGGGRPFHSRYVLI RDEKSSTKDVVNAVHNKAHCAILSTGNPLNPKFNFISDKELHNCVYDRNN LFYVIIQFLIYMRQHQDSALECVNLGKSGINIMCVIED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24321-PA | 545 | GF24321-PA | 9..545 | 5..538 | 2377 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15823-PA | 542 | GG15823-PA | 9..542 | 5..538 | 2744 | 94.2 | Plus |
Dere\GG15122-PA | 402 | GG15122-PA | 140..392 | 278..538 | 723 | 57.4 | Plus |
Dere\GG15122-PA | 402 | GG15122-PA | 9..139 | 5..142 | 263 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14916-PA | 931 | GH14916-PA | 373..931 | 3..538 | 1805 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6479-PB | 538 | CG6479-PB | 1..538 | 1..538 | 2840 | 100 | Plus |
CG6479-PA | 542 | CG6479-PA | 9..542 | 5..538 | 2823 | 100 | Plus |
CG6479-PC | 536 | CG6479-PC | 9..536 | 5..538 | 2775 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12895-PA | 608 | GI12895-PA | 44..608 | 13..538 | 1760 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15495-PA | 535 | GL15495-PA | 10..535 | 11..538 | 2162 | 75.5 | Plus |
Dper\GL19039-PA | 472 | GL19039-PA | 9..472 | 10..538 | 1068 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23842-PA | 535 | GA23842-PA | 10..535 | 11..538 | 2157 | 75.5 | Plus |
Dpse\GA25319-PA | 500 | GA25319-PA | 9..500 | 10..538 | 1192 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24343-PA | 542 | GM24343-PA | 9..542 | 5..538 | 2817 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12417-PA | 515 | GD12417-PA | 9..515 | 5..538 | 2644 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13037-PA | 550 | GJ13037-PA | 17..550 | 24..538 | 1847 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20346-PA | 539 | GK20346-PA | 9..539 | 5..538 | 2054 | 71.6 | Plus |
Translation from 25 to 1641
> AT01767.hyp MLLSSPLSKNPVVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQA CRSAYRTYWFLAECTITTLIGLSALACFGKYLWLWFGGDQVTGSDIQKWL LDGKAENSFRTVCSRAVMKPRSYEPDSDIEDDIPIINWHSSFEDSCWGSQ SMRRSPSPTRTPQQTKQNTSYNSSMVRNNSLNASNLSNESTYMSPYAEVR RDDFMTDTRKLTSLMKQADRERSMMDSSDTPNVQSMGSANSFWNYCNNAA YMLKTTIYQLSPPPAVSTENAPTSIEEFGGIQFRDSNSEVIKRISTDKLS QYVANLRFWISTTILQRLVKEINYVDDVFRQRALIDIKIGSVSVERLRKT AENQQFVQTCAPMLPMLLPFLDTFSNQEYLVQRIKELAQGSCIADYRWYS GKTHNGQQRDEHLPTDAAIIFHLFCVYLDSQLMPLPQGGGRPFHSRYVLI RDEKSSTKDVVNAVHNKAHCAILSTGNPLNPKFNFISDKELHNCVYDRNN LFYVIIQFLIYMRQHQDSALECVNLGKSGINIMCVIED*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6479-PB | 538 | CG6479-PB | 1..538 | 1..538 | 2840 | 100 | Plus |
CG6479-PA | 542 | CG6479-PA | 9..542 | 5..538 | 2823 | 100 | Plus |
CG6479-PC | 536 | CG6479-PC | 9..536 | 5..538 | 2775 | 98.9 | Plus |