BDGP Sequence Production Resources |
Search the DGRC for AT01806
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 18 |
Well: | 6 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5662-RA |
Protein status: | AT01806.pep: gold |
Preliminary Size: | 879 |
Sequenced Size: | 974 |
Gene | Date | Evidence |
---|---|---|
CG5662 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5662 | 2002-02-22 | Blastp of sequenced clone |
CG5662 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5662 | 2008-04-29 | Release 5.5 accounting |
CG5662 | 2008-08-15 | Release 5.9 accounting |
CG5662 | 2008-12-18 | 5.12 accounting |
974 bp (974 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089216
> AT01806.complete GAAACCCACAGTCAAAATTTTCGGCACTTTAAGCATGGAGTTGGAACAAA ACTTGACCGCCGCCCTGATGCAGTCGTCGGCGGAGGAGGGCAAGTCGGAG GAGGCGTGGCCGGCGGACGCCCACCTGCATCAGCCGGCCGAGGCGAATCA GCTCCTGCTGCCGGAGCGCTCCAGCTGCCTGGCGGTGAAGACGTTTTTGC GCATGTGCAACCTACCATTTACGGAGCACATCAGCGACAATGCAGAGTTT ATGTCACCAGGTGGCCGGTTGACCCACCTGCCGCTGCTCCGTTTGGGCCC TGTCAAGACTTTTGCGGAATTCGAGCCAATAGTGGCCCAAGTGGAGGCCG TGCAAGGCGGCAATTGCCTGGACAGTTGGATGTCCGAGGATCAGCGCGAT AACATCCGCTGTCTGGTTAGCTATGTGGAGAATGTCTTCACCCTGGCGGA GATTCACATGAGTTTTGTGGATGAGGTAAACTATCAACTTTACACGGCAA CGCGCTGTGCAGCCGCTCATCCGTGGCCGTTGAGTACGATTCGCCGGTTT GCCAAGCAGAAGGACGCACAGAAGATACTGAAGGTCTACCGGTGGCAGGA TTTGGACAACGACCAGGTAATCCAGGAGGTGAGCATCTGTGCCGATGCGT TGATCGCTGAACTGGAGGAGGACCAGGCGAAGAGCTATTTCGGCGGCTCA CGACCTTGCAAATTGGACGCCCTGGTCTTTGGCCATGTGGTAGCCATAAT GACCACCAAGCTTCCCAACATGGAACTGGCCGCGGTTCTGGCCACATATC CACGTCTATTGGCCCACTGTCGCCGCATCGATCAGAGCCTGTTTGATGGC AAACTCCTGACCAGCGCGGTGGAGGAGCAGGAGGACGAGATGGAGTTGGA AAAAATAGAATAAAGGAAAGGGCAGGACTCGGAATCCCTCTGCCCCGGAA CAAAGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5662-RA | 983 | CG5662-RA | 25..981 | 1..957 | 4755 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15100530..15101485 | 1..956 | 4735 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15210422..15211378 | 1..957 | 4755 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15218520..15219476 | 1..957 | 4755 | 99.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15100530..15101485 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 1..879 | 35..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 1..879 | 35..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 1..879 | 35..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 1..879 | 35..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 1..879 | 35..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 25..980 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 25..980 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 25..980 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 25..980 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5662-RA | 37..992 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15210422..15211377 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15210422..15211377 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15210422..15211377 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15104455..15105410 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15218520..15219475 | 1..956 | 99 | Plus |
Translation from 1 to 912
> AT01806.hyp KPTVKIFGTLSMELEQNLTAALMQSSAEEGKSEEAWPADAHLHQPAEANQ LLLPERSSCLAVKTFLRMCNLPFTEHISDNAEFMSPGGRLTHLPLLRLGP VKTFAEFEPIVAQVEAVQGGNCLDSWMSEDQRDNIRCLVSYVENVFTLAE IHMSFVDEVNYQLYTATRCAAAHPWPLSTIRRFAKQKDAQKILKVYRWQD LDNDQVIQEVSICADALIAELEEDQAKSYFGGSRPCKLDALVFGHVVAIM TTKLPNMELAAVLATYPRLLAHCRRIDQSLFDGKLLTSAVEEQEDEMELE KIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5662-PB | 292 | CG5662-PB | 1..292 | 12..303 | 1512 | 100 | Plus |
CG5662-PA | 292 | CG5662-PA | 1..292 | 12..303 | 1512 | 100 | Plus |
CG8004-PA | 269 | CG8004-PA | 6..267 | 22..286 | 622 | 46.8 | Plus |
Translation from 34 to 912
> AT01806.pep MELEQNLTAALMQSSAEEGKSEEAWPADAHLHQPAEANQLLLPERSSCLA VKTFLRMCNLPFTEHISDNAEFMSPGGRLTHLPLLRLGPVKTFAEFEPIV AQVEAVQGGNCLDSWMSEDQRDNIRCLVSYVENVFTLAEIHMSFVDEVNY QLYTATRCAAAHPWPLSTIRRFAKQKDAQKILKVYRWQDLDNDQVIQEVS ICADALIAELEEDQAKSYFGGSRPCKLDALVFGHVVAIMTTKLPNMELAA VLATYPRLLAHCRRIDQSLFDGKLLTSAVEEQEDEMELEKIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21225-PA | 297 | GF21225-PA | 12..272 | 17..276 | 887 | 64 | Plus |
Dana\GF10837-PA | 269 | GF10837-PA | 6..267 | 11..275 | 648 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17868-PA | 287 | GG17868-PA | 1..277 | 1..277 | 1301 | 85.9 | Plus |
Dere\GG13360-PA | 269 | GG13360-PA | 6..269 | 11..277 | 641 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14498-PA | 270 | GH14498-PA | 17..268 | 21..275 | 656 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5662-PB | 292 | CG5662-PB | 1..292 | 1..292 | 1512 | 100 | Plus |
CG5662-PA | 292 | CG5662-PA | 1..292 | 1..292 | 1512 | 100 | Plus |
CG8004-PA | 269 | CG8004-PA | 6..267 | 11..275 | 622 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13657-PA | 270 | GI13657-PA | 7..268 | 11..275 | 665 | 48.3 | Plus |
Dmoj\GI21548-PA | 123 | GI21548-PA | 59..119 | 215..275 | 148 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22904-PA | 268 | GL22904-PA | 6..267 | 11..275 | 626 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23333-PA | 268 | GA23333-PA | 6..267 | 11..275 | 627 | 45.3 | Plus |
Dpse\GA23925-PA | 111 | GA23925-PA | 1..110 | 166..275 | 247 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12065-PA | 235 | GM12065-PA | 1..226 | 1..226 | 1140 | 92.5 | Plus |
Dsec\GM15407-PA | 269 | GM15407-PA | 6..267 | 11..275 | 645 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17197-PA | 287 | GD17197-PA | 1..287 | 1..287 | 1441 | 93.4 | Plus |
Dsim\GD12238-PA | 269 | GD12238-PA | 6..267 | 11..275 | 642 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15694-PA | 292 | GJ15694-PA | 32..290 | 25..277 | 691 | 50 | Plus |
Dvir\GJ13992-PA | 270 | GJ13992-PA | 7..268 | 11..275 | 655 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17494-PA | 271 | GK17494-PA | 6..265 | 11..273 | 637 | 47.1 | Plus |