BDGP Sequence Production Resources |
Search the DGRC for AT01876
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 18 |
Well: | 76 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG17744-RA |
Protein status: | AT01876.pep: gold |
Preliminary Size: | 717 |
Sequenced Size: | 954 |
Gene | Date | Evidence |
---|---|---|
CG17744 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17744 | 2002-02-22 | Blastp of sequenced clone |
CG17744 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17744 | 2008-04-29 | Release 5.5 accounting |
CG17744 | 2008-08-15 | Release 5.9 accounting |
CG17744 | 2008-12-18 | 5.12 accounting |
954 bp (954 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089222
> AT01876.complete CTTCAACTTGCCACATTATATTTTTTTTCCACCATGGAGTCTGCTAAAGT CCTAAATAAACTATTGAAGGAAGCTCCCAAAGATTCAAAAGGAAGCAAAG AGATTGAAGAGTTACGAAACCTGATCATAGAGCTGATGAAACCACGACTG GGACAACTACTTCAGATACTAAAGACTCGCATGATAGCTTCCACTCGAGA TGAGTTTCAAGATGAAAATGAAGACTGGTGGCCAGATTATGAGCTATTAT CAGCAGACTGGAGAGCCTTCACAGATATGAATGGTCTTTTAGTCTGCACT CAGAATGCTTTAAAGGGACTACCGGGTGATCTTAAGGCCATTGGTGAAAA GTTCGATTATGCCTATTCCGTTGCAAAGCCTATAACTGCTCGAAATAAGA CCAAAAACTATTTTTTAGTAGTGGAACTTATAGAGGACATGGAGGACTTT GTAACGCACCTCAGCCGCCTGTGTAGCAAGAATCTGGACGAGCGAAGGGA CCTATACGATCTGGCTTCGATAACTAAAGATACTGGCGATAGAATCAAGG TGAAAGTCTTCGATGAACGCATCTTTGTGCAATTGCAGTCGCGAATTGCA AGTCTTAGGAACTACATAAGGGACTTCTGTGCCCTTTTCGATGCCCACTT GGAGTCCGAAGAGGAGGATGAATTCGAAACATTAGATATGTTGGCAAAAC CCCAAGGACCACTTGCCACGGGAACCAATGCTGATAAGGCCCGGACTTAA GCCAAATCGATCAGGAAGTCATCTCACCGTCTATTTCCATGGCATGGCTT CCAACGGTTTTCATTGTACAATACCCACACTTGGAGCTACAGAACACAGA AACATGACTCCGGCATATGGGCGGCAATAAAGAGTTCGCCTCCAGTGTAT TGGAGTATCTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17744-RA | 1076 | CG17744-RA | 105..1020 | 1..916 | 4535 | 99.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7018758..7019040 | 1..282 | 99 | Minus | |
chr3L | 7018059..7018689 | 283..913 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..717 | 34..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..717 | 34..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..717 | 34..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..717 | 34..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..717 | 34..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..913 | 1..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..913 | 1..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 14..926 | 1..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 1..913 | 1..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17744-RA | 14..926 | 1..913 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7025801..7026431 | 283..913 | 99 | <- | Minus |
3L | 7026500..7026781 | 1..282 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7025801..7026431 | 283..913 | 99 | <- | Minus |
3L | 7026500..7026781 | 1..282 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7025801..7026431 | 283..913 | 99 | <- | Minus |
3L | 7026500..7026781 | 1..282 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7018901..7019531 | 283..913 | 99 | <- | Minus |
arm_3L | 7019600..7019881 | 1..282 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7018901..7019531 | 283..913 | 99 | <- | Minus |
3L | 7019600..7019881 | 1..282 | 99 | Minus |
Translation from 1 to 749
> AT01876.hyp LQLATLYFFSTMESAKVLNKLLKEAPKDSKGSKEIEELRNLIIELMKPRL GQLLQILKTRMIASTRDEFQDENEDWWPDYELLSADWRAFTDMNGLLVCT QNALKGLPGDLKAIGEKFDYAYSVAKPITARNKTKNYFLVVELIEDMEDF VTHLSRLCSKNLDERRDLYDLASITKDTGDRIKVKVFDERIFVQLQSRIA SLRNYIRDFCALFDAHLESEEEDEFETLDMLAKPQGPLATGTNADKART*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17744-PA | 238 | CG17744-PA | 1..238 | 12..249 | 1220 | 100 | Plus |
Translation from 33 to 749
> AT01876.pep MESAKVLNKLLKEAPKDSKGSKEIEELRNLIIELMKPRLGQLLQILKTRM IASTRDEFQDENEDWWPDYELLSADWRAFTDMNGLLVCTQNALKGLPGDL KAIGEKFDYAYSVAKPITARNKTKNYFLVVELIEDMEDFVTHLSRLCSKN LDERRDLYDLASITKDTGDRIKVKVFDERIFVQLQSRIASLRNYIRDFCA LFDAHLESEEEDEFETLDMLAKPQGPLATGTNADKART*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24800-PA | 238 | GF24800-PA | 1..224 | 1..227 | 661 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15007-PA | 238 | GG15007-PA | 1..238 | 1..238 | 1067 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16087-PA | 213 | GH16087-PA | 26..198 | 26..212 | 170 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17744-PA | 238 | CG17744-PA | 1..238 | 1..238 | 1220 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12350-PA | 240 | GI12350-PA | 26..232 | 26..217 | 315 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25153-PA | 239 | GL25153-PA | 1..225 | 1..227 | 406 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14640-PA | 239 | GA14640-PA | 1..225 | 1..227 | 390 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13796-PA | 238 | GM13796-PA | 1..238 | 1..238 | 1176 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13096-PA | 238 | GD13096-PA | 1..237 | 1..237 | 1147 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12242-PA | 241 | GJ12242-PA | 6..217 | 11..204 | 359 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20450-PA | 235 | GE20450-PA | 1..235 | 1..238 | 1041 | 83.6 | Plus |