BDGP Sequence Production Resources |
Search the DGRC for AT02187
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 21 |
Well: | 87 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG33199-RA |
Protein status: | AT02187.pep: gold |
Sequenced Size: | 1078 |
Gene | Date | Evidence |
---|---|---|
CG33981 | 2009-01-20 | Manual selection by Sue Celniker |
CG33199 | 2009-01-20 | Manual selection by Sue Celniker |
1078 bp assembled on 2009-03-10
GenBank Submission: BT072835.1
> AT02187.complete CACATGAGTTCTAGATCGTTTAGTTTTCTTGGTTTTCATTTGCTCGCCAA ATTTTAGCAACGTTGCTGGTTTAATCGGCTGCACCTGCAATCGCGGTTAA TCAGAGAGCGCCGAGCACTAAAGTTCCCATTGCCAAACGAAACGTCCCGA TTTGCTCGATTTGGAACTGGAACGGACCATGAAAACAAGCAATCTCGGCC TGTACGCTTTCCGTTTAACCTTCGGTCAGGCGCCGACGTTGTCCACACAG GCCACGACGCACTGCAGCCATGGCTTCACCACCAGCTCGTCGTCGCCCAA CCGTGTGGTGACCCGCTCTGCCACCATGCTGGCGCTCTTCGGCATCGCGC TGTCCTCGTTCAGCCTTAAGCAACTGCTGGCCAAGAAGCAGAAGCACCAG GGCCTGCGCAAGCTCTAGAATGGAGCTATAGCCAGAAAGATTAGAGCGAT GCCAACGCCAACGGTTGAAGCGGCGATGAGGAGCCAGAGCGCCATGTCCT GAGGTCACACATTCGATATTTTCATCATCCGCCATCATCGTGTATATTTG CCTAAGTTAAGTCACCCACTCACCACAGACCCAAGCGGAACTCGGACATG GAGGCTTGTTTTGTAATATTCTGTTCGATAAACTAACTGATCGGAGGCGA GGATCTGTGCGCATATATAGATATATTTTCTTGTTTACACATGCACACCA TGCGTCGCCAACTAAAAGGAATAAATTTGTGATAAATCGTGTATGAAAAA AGCCCATCGGCAGACAAACTGAACGAAGGAGCGATGGAGGAGAAGATTCG CTGAGCTTGCGGGAATCCCAAATTTTCCTATACTCTTTTGTTGCCCGTTT TAGTAATATTTATTTTATGTGTAAACAAGTCTATTATATACGTATATTTA TTTACAAGTTATTTGCAAACCAGAGAAACGACTAAGTAGGGAGGTATAAA ACAATAATGACTTCGTTGGACTGCAGATCGCCGAGCAGGCTGTGTCAGTA TCCAAGAAACAAACTAGTTCTAGTTCCGTATTCAAATAAATGCATTATAT TCAATTCGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8229-RE | 2066 | CG8229-RE | 1167..2001 | 228..1062 | 4175 | 100 | Plus |
CG33199-RA | 789 | CG33199-RA | 52..789 | 1..738 | 3690 | 100 | Plus |
CG8229-RE | 2066 | CG8229-RE | 80..309 | 1..230 | 1150 | 100 | Plus |
CG8229-RD | 1537 | CG8229-RD | 80..309 | 1..230 | 1150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4835687..4836518 | 1058..227 | 4160 | 100 | Minus |
chr2R | 21145070 | chr2R | 4838486..4838630 | 145..1 | 725 | 100 | Minus |
chr2R | 21145070 | chr2R | 4838282..4838368 | 230..144 | 435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4835687..4836515 | 230..1058 | 100 | <- | Minus |
chr2R | 4838283..4838368 | 144..229 | 100 | <- | Minus |
chr2R | 4838488..4838630 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 1..240 | 179..418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 1..240 | 179..418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 1..240 | 179..418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 1..240 | 179..418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8229-RE | 52..280 | 1..229 | 100 | -> | Plus |
CG8229-RE | 1141..1969 | 230..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8229-RE | 1141..1969 | 230..1058 | 100 | Plus | |
CG8229-RE | 52..280 | 1..229 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 34..1091 | 1..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33199-RA | 34..1091 | 1..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8948113..8948941 | 230..1058 | 100 | <- | Minus |
2R | 8950706..8950791 | 144..229 | 100 | <- | Minus |
2R | 8950911..8951053 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8948113..8948941 | 230..1058 | 100 | <- | Minus |
2R | 8950706..8950791 | 144..229 | 100 | <- | Minus |
2R | 8950911..8951053 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8948113..8948941 | 230..1058 | 100 | <- | Minus |
2R | 8950706..8950791 | 144..229 | 100 | <- | Minus |
2R | 8950911..8951053 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4835618..4836446 | 230..1058 | 100 | <- | Minus |
arm_2R | 4838211..4838296 | 144..229 | 100 | <- | Minus |
arm_2R | 4838416..4838558 | 1..143 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8949312..8950140 | 230..1058 | 100 | <- | Minus |
2R | 8951905..8951990 | 144..229 | 100 | <- | Minus |
2R | 8952110..8952252 | 1..143 | 100 | Minus |
Translation from 178 to 417
> AT02187.hyp MKTSNLGLYAFRLTFGQAPTLSTQATTHCSHGFTTSSSSPNRVVTRSATM LALFGIALSSFSLKQLLAKKQKHQGLRKL*
Translation from 178 to 417
> AT02187.pep MKTSNLGLYAFRLTFGQAPTLSTQATTHCSHGFTTSSSSPNRVVTRSATM LALFGIALSSFSLKQLLAKKQKHQGLRKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10603-PA | 79 | GG10603-PA | 1..79 | 1..79 | 385 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20268-PA | 81 | GH20268-PA | 1..81 | 1..79 | 296 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG33199-PB | 79 | CG33199-PB | 1..79 | 1..79 | 393 | 100 | Plus |
CG33199-PA | 79 | CG33199-PA | 1..79 | 1..79 | 393 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19437-PA | 80 | GI19437-PA | 1..80 | 1..79 | 315 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11091-PA | 72 | GL11091-PA | 10..72 | 18..79 | 240 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24609-PA | 71 | GA24609-PA | 3..71 | 12..79 | 254 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20648-PA | 79 | GM20648-PA | 1..79 | 1..79 | 386 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10122-PA | 79 | GD10122-PA | 1..79 | 1..79 | 395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21189-PA | 80 | GJ21189-PA | 1..80 | 1..79 | 334 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17819-PA | 69 | GK17819-PA | 1..69 | 1..79 | 256 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22689-PA | 206 | GE22689-PA | 145..206 | 18..79 | 297 | 95.2 | Plus |