BDGP Sequence Production Resources |
Search the DGRC for AT02196
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 21 |
Well: | 96 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG12093-RA |
Protein status: | AT02196.pep: gold |
Preliminary Size: | 1290 |
Sequenced Size: | 1296 |
Gene | Date | Evidence |
---|---|---|
CG12093 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12093 | 2004-01-09 | Blastp of sequenced clone |
CG12093 | 2008-04-29 | Release 5.5 accounting |
CG12093 | 2008-08-15 | Release 5.9 accounting |
CG12093 | 2008-12-18 | 5.12 accounting |
1296 bp (1296 high quality bases) assembled on 2004-01-09
GenBank Submission: BT011424
> AT02196.complete CAGCTCCACAGCTGTTTTGCCAAGTTCTTAATTATATTTTTGTTTGCTTA TTTTGCGCTTTTGTTTTTCTTTTGCTTGCAATTATTATGTTTATTTGGCA TTACTTGACCCTCTTGTGCCTTGGGTTCGCCCTCATCGATGCGAAATCCA TCAAGAAGTCGCAGGCCAATCTGTTGGAGCCAACTCTTGATCCTGATGAG AAGCTAGGGAAGATTGGGAAGTCCCCACCCGACATTTCCAATGATGTGCA ACGTGTGCAGGTTCCATTAGGTGCGACGCCCGGCAAGAATGGCTGGCAGG GCAAGTGGTTTCCCCATGCCCCTGGACAACAGCAGGAAGCGATTGAATTA AAAATGAAGAGCACCACGGAGGAAGTTCCTCCGCTGGAGTTCACAACCAA GGATGGCTGGCAGGGCAAGTGGTTTCCACAAGCTCCCGGAGAGCCGCACT TGGTGAAGAAAAAACCGCTGGTCGATAACAAAACCAAGTCGGGGAAGTCC ACCACACAGGATACTTGGCAGGGTAAATTGTTTCCGCAGGGTCCCAATGA ATCGCACAAGACTAAACAAAGCAGCTGTGATGATGGCAAGAGCAATCTTG CCGTGGACTTCGATCCAAACGACATCCGTGACAGCCTGAATTTCCTATGC ATCAGTAGTAATCACAGCTTGTACCAACCGGATTTGTCCAGAGAAGCCAT TCTTACGGAGCACTTTCTACCTAGCGCCTATCTGCCGCCTGCCAAGTGCC TTAATGAGTCCATTAGCTACTCCCATCTGCCTGCCACCAATGGCCCCTAT CGCCCGATGCCCGCTGAATATGGCACCTATTCCTACTTGCCTCCTCAGCG ATACGTGCGTAATCTGGCGGAAGGTGCCATCGTAATGCTCTACCATCCCT GCGCTTTTCCCGGCCAAGTGAAGCAGCTGCAAGACATCGTGGGTGGCTGT CTGTATCGCCATCTGGTGTCACCCTCGCTGGCTCTGAGTCCGCAGCGACC GCTGGCCCTGCTCGCCTGGAGTCGCAGCCTCGAGATGTCCGTCGTGGATC GACAACTGGCGGCGGACTTCATCCAGAAACACGCCAAGCAAGGACCACTT GCACCGGAGGAATTGTCGCGTTTGATTGTCAAGAGACAGACCTACAAGGA GGGCCTTCTTAGGGAAGCGCACTTGGTCAACACGGCGGACGACTACGAGC TGTGCGGCTACCTACAGGAGGATATGTAGGCCAAATGTGTTAACTATTTG TTTTTAATAAACCTCGAATACTTTGCCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12093-RA | 1407 | CG12093-RA | 33..1311 | 1..1279 | 6395 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2772836..2773425 | 590..1 | 2890 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 2771997..2772483 | 1277..791 | 2405 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 2772542..2772743 | 790..589 | 1010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2773399..2773988 | 590..1 | 2950 | 100 | Minus |
3L | 28110227 | 3L | 2772558..2773046 | 1279..791 | 2445 | 100 | Minus |
3L | 28110227 | 3L | 2773105..2773306 | 790..589 | 1010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2773399..2773988 | 590..1 | 2950 | 100 | Minus |
3L | 28103327 | 3L | 2772558..2773046 | 1279..791 | 2445 | 100 | Minus |
3L | 28103327 | 3L | 2773105..2773306 | 790..589 | 1010 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2771997..2772483 | 791..1277 | 99 | <- | Minus |
chr3L | 2772542..2772741 | 591..790 | 100 | <- | Minus |
chr3L | 2772836..2773329 | 97..590 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 1..1143 | 87..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 1..1143 | 87..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 1..1143 | 87..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 1..1143 | 87..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 1..1143 | 87..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 14..1290 | 1..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 14..1290 | 1..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 20..1296 | 1..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 14..1290 | 1..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12093-RA | 20..1296 | 1..1277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2772560..2773046 | 791..1277 | 100 | <- | Minus |
3L | 2773105..2773304 | 591..790 | 100 | <- | Minus |
3L | 2773399..2773988 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2772560..2773046 | 791..1277 | 100 | <- | Minus |
3L | 2773105..2773304 | 591..790 | 100 | <- | Minus |
3L | 2773399..2773988 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2772560..2773046 | 791..1277 | 100 | <- | Minus |
3L | 2773105..2773304 | 591..790 | 100 | <- | Minus |
3L | 2773399..2773988 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2772560..2773046 | 791..1277 | 100 | <- | Minus |
arm_3L | 2773105..2773304 | 591..790 | 100 | <- | Minus |
arm_3L | 2773399..2773988 | 1..590 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2773105..2773304 | 591..790 | 100 | <- | Minus |
3L | 2772560..2773046 | 791..1277 | 100 | <- | Minus |
3L | 2773399..2773988 | 1..590 | 100 | Minus |
Translation from 2 to 1228
> AT02196.hyp APQLFCQVLNYIFVCLFCAFVFLLLAIIMFIWHYLTLLCLGFALIDAKSI KKSQANLLEPTLDPDEKLGKIGKSPPDISNDVQRVQVPLGATPGKNGWQG KWFPHAPGQQQEAIELKMKSTTEEVPPLEFTTKDGWQGKWFPQAPGEPHL VKKKPLVDNKTKSGKSTTQDTWQGKLFPQGPNESHKTKQSSCDDGKSNLA VDFDPNDIRDSLNFLCISSNHSLYQPDLSREAILTEHFLPSAYLPPAKCL NESISYSHLPATNGPYRPMPAEYGTYSYLPPQRYVRNLAEGAIVMLYHPC AFPGQVKQLQDIVGGCLYRHLVSPSLALSPQRPLALLAWSRSLEMSVVDR QLAADFIQKHAKQGPLAPEELSRLIVKRQTYKEGLLREAHLVNTADDYEL CGYLQEDM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12093-PA | 380 | CG12093-PA | 1..380 | 29..408 | 2039 | 100 | Plus |
Translation from 86 to 1228
> AT02196.pep MFIWHYLTLLCLGFALIDAKSIKKSQANLLEPTLDPDEKLGKIGKSPPDI SNDVQRVQVPLGATPGKNGWQGKWFPHAPGQQQEAIELKMKSTTEEVPPL EFTTKDGWQGKWFPQAPGEPHLVKKKPLVDNKTKSGKSTTQDTWQGKLFP QGPNESHKTKQSSCDDGKSNLAVDFDPNDIRDSLNFLCISSNHSLYQPDL SREAILTEHFLPSAYLPPAKCLNESISYSHLPATNGPYRPMPAEYGTYSY LPPQRYVRNLAEGAIVMLYHPCAFPGQVKQLQDIVGGCLYRHLVSPSLAL SPQRPLALLAWSRSLEMSVVDRQLAADFIQKHAKQGPLAPEELSRLIVKR QTYKEGLLREAHLVNTADDYELCGYLQEDM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10238-PA | 358 | GF10238-PA | 1..358 | 1..380 | 1254 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14499-PA | 380 | GG14499-PA | 1..380 | 1..380 | 1762 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15176-PA | 349 | GH15176-PA | 20..346 | 16..379 | 1005 | 53.8 | Plus |
Dgri\GH23395-PA | 298 | GH23395-PA | 20..297 | 16..330 | 862 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12093-PA | 380 | CG12093-PA | 1..380 | 1..380 | 2039 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12115-PA | 344 | GI12115-PA | 1..344 | 2..380 | 986 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18433-PA | 352 | GL18433-PA | 3..352 | 1..380 | 1141 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11390-PA | 350 | GA11390-PA | 1..350 | 1..380 | 1141 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14105-PA | 380 | GM14105-PA | 1..380 | 1..380 | 1854 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13373-PA | 379 | GD13373-PA | 1..378 | 1..378 | 1857 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13389-PA | 362 | GJ13389-PA | 11..362 | 7..380 | 1016 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12539-PA | 377 | GK12539-PA | 1..377 | 1..380 | 1017 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21690-PA | 380 | GE21690-PA | 1..380 | 1..380 | 1807 | 88.2 | Plus |