Clone AT02269 Report

Search the DGRC for AT02269

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:22
Well:69
Vector:pOTB7
Associated Gene/TranscriptCG10508-RI
Protein status:AT02269.pep: gold
Sequenced Size:1290

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10508-RC 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

AT02269.complete Sequence

1290 bp assembled on 2010-12-13

GenBank Submission: BT125841.1

> AT02269.complete
TTTAAATTCTCGATGTTGTAACATAATATTCTTTTAACTTAAATTTTCTT
CGATGATAAATAATATCCAAATTCCACCATAGATACATGAAGAATATATT
CCCCAAGGCGGACGAAGAGCTGCTTCTGGATATCCTGGCAAATGCGGATA
ACAACGTGCAGTTCGCATCGGAAAAGTTGATTTCTTTGGGCTACACAAAA
AGAGATATGCAACAGCCACACAGACCCAACAATCGCCCGCCGGACCTAAA
TCAAGATCAGGAGGCTGGAGGGGATCAGAGTGGTGTACATATACCGCTGA
GACCCAAGGAATACACAGAGGAAGAGAAGACAAAAATGCAAACTTTGCTT
AAGGAGAAGTACCCACAGATTGCCGAGCGCATTATCCTAATGGCTTTGGA
ATCCGTCAACTATGCAGAGGATAGGGCTACGCAAATCCTACAAATAGTCC
AGGACGAGGACGAGCAGAGGGAGCAAAAGCAGGCTCCCATGAATCCCAAG
CACCTGGATCTTAAGAAAACCACAGGAACCGAGCAGATCGATGGTGCCAA
CGAAAAAGACAGCCTGCCCGCCGTGGTGGAGCCCACCACTTCATCCAAGC
CGAAGCCGCCGCACAAGCGCCACATTCTTCCATCGATCAATGTCACCACT
CCATCAACGTTCACCACCCAGATCATTTTGGCACAGGCTACGCCCACACC
AACGCCCACAGCGGAGGAGATGAAGCTGGAGACCCATCTGTCATCCATCT
CTAGTGCTTCCTCATCGCATTCATATGCCTCACCCCCACAATCACCCCGC
ATCTTCCAGCAAAGCTACGAACGCCTGACCACCAAGAGCATTTTGGCCAA
GAGCGGCCATAACCATTTTGGCCACCAGAGCGATACCAATAACTACAGCA
TCGACGGCTACCTGCATGGCTCCTCAAATGCTAGCTCCTACTCCTCCTAC
TCCGCATCAATGACGTCCTCATCGCTGGTCTCGTCGGCCCAGTCCAACTC
CTCATCCATCGCGAGGAGGCCAGCTTTCGAAAGTCGTGCTCGCACCAAAA
CCGATTCACTGAAGTATGCCCGCTAAAACCAAAAACCGTTCCGATAACCG
TTTTTTTACCGTTTCGCTAAGTAAAATCAATCGTTTTGCGCATGAGTTTT
TCAAGGAGTTCGCATGGATAGTATCGGGAAATCCGTTTTTGAGATATTAT
TTTTGAACCTGTTAACTATATTCTTTCGGCATGCCTTAAGCTCAATATAA
AATATTAAATCTTTGAAAAAAAAAAAAAAAAAAAAAAAAA

AT02269.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21203614..21204319 560..1265 3530 100 Plus
chr3L 24539361 chr3L 21202767..21203102 1..336 1680 100 Plus
chr3L 24539361 chr3L 21203156..21203381 337..562 1130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21214609..21215317 560..1268 3545 100 Plus
3L 28110227 3L 21213762..21214097 1..336 1680 100 Plus
3L 28110227 3L 21214151..21214376 337..562 1130 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21207709..21208417 560..1268 3545 100 Plus
3L 28103327 3L 21206862..21207197 1..336 1680 100 Plus
3L 28103327 3L 21207251..21207476 337..562 1130 100 Plus
Blast to na_te.dros performed on 2019-03-17 01:19:09 has no hits.

AT02269.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:20:22 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21202767..21203102 1..336 100 -> Plus
chr3L 21203156..21203381 337..562 100 -> Plus
chr3L 21203617..21204293 563..1239 100 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2010-12-14 18:27:12 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RF 883..1869 81..1070 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:35:32 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RI 1..990 87..1076 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:54:55 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RI 1..990 87..1076 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-14 18:27:12 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RC 1..1067 1..1067 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:35:32 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RI 1..1265 1..1265 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:54:55 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
CG10508-RI 1..1265 1..1265 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:22 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21213762..21214097 1..336 100 -> Plus
3L 21214151..21214376 337..562 100 -> Plus
3L 21214612..21215314 563..1265 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:22 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21213762..21214097 1..336 100 -> Plus
3L 21214151..21214376 337..562 100 -> Plus
3L 21214612..21215314 563..1265 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:22 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21213762..21214097 1..336 100 -> Plus
3L 21214151..21214376 337..562 100 -> Plus
3L 21214612..21215314 563..1265 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:35:32 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21206862..21207197 1..336 100 -> Plus
arm_3L 21207251..21207476 337..562 100 -> Plus
arm_3L 21207712..21208414 563..1265 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:52:53 Download gff for AT02269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21206862..21207197 1..336 100 -> Plus
3L 21207251..21207476 337..562 100 -> Plus
3L 21207712..21208414 563..1265 100   Plus

AT02269.pep Sequence

Translation from 86 to 1075

> AT02269.pep
MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNR
PPDLNQDQEAGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERII
LMALESVNYAEDRATQILQIVQDEDEQREQKQAPMNPKHLDLKKTTGTEQ
IDGANEKDSLPAVVEPTTSSKPKPPHKRHILPSINVTTPSTFTTQIILAQ
ATPTPTPTAEEMKLETHLSSISSASSSHSYASPPQSPRIFQQSYERLTTK
SILAKSGHNHFGHQSDTNNYSIDGYLHGSSNASSYSSYSASMTSSSLVSS
AQSNSSSIARRPAFESRARTKTDSLKYAR*

AT02269.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24301-PA 742 GF24301-PA 302..630 1..327 879 68.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16166-PA 733 GG16166-PA 297..623 1..327 1389 94.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12144-PA 727 GH12144-PA 300..615 1..326 779 59.4 Plus
Dgri\GH14970-PA 727 GH14970-PA 300..615 1..326 777 59.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10508-PI 329 CG10508-PI 1..329 1..329 1676 100 Plus
CG10508-PK 733 CG10508-PK 297..623 1..327 1662 99.7 Plus
CG10508-PJ 732 CG10508-PJ 296..622 1..327 1662 99.7 Plus
CG10508-PL 445 CG10508-PL 176..333 1..158 814 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13130-PA 723 GI13130-PA 302..611 1..326 739 56.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24668-PA 410 GL24668-PA 226..292 87..153 272 76.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10361-PA 755 GA10361-PA 292..643 1..327 872 62 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22348-PA 732 GM22348-PA 296..622 1..327 1440 95.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14941-PA 732 GD14941-PA 297..622 1..327 1648 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13878-PA 709 GJ13878-PA 304..597 1..326 776 58.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16817-PA 776 GK16817-PA 313..669 1..327 740 54.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23056-PA 733 GE23056-PA 297..623 1..327 1376 94.2 Plus
Dyak\GE19734-PA 498 GE19734-PA 297..390 1..94 483 93.6 Plus

AT02269.hyp Sequence

Translation from 86 to 1075

> AT02269.hyp
MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNR
PPDLNQDQEAGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERII
LMALESVNYAEDRATQILQIVQDEDEQREQKQAPMNPKHLDLKKTTGTEQ
IDGANEKDSLPAVVEPTTSSKPKPPHKRHILPSINVTTPSTFTTQIILAQ
ATPTPTPTAEEMKLETHLSSISSASSSHSYASPPQSPRIFQQSYERLTTK
SILAKSGHNHFGHQSDTNNYSIDGYLHGSSNASSYSSYSASMTSSSLVSS
AQSNSSSIARRPAFESRARTKTDSLKYAR*

AT02269.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:47:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG10508-PI 329 CG10508-PI 1..329 1..329 1676 100 Plus
CG10508-PJ 732 CG10508-PJ 296..622 1..327 1662 99.7 Plus
CG10508-PK 733 CG10508-PK 297..623 1..327 1662 99.7 Plus
CG10508-PL 445 CG10508-PL 176..333 1..158 814 100 Plus