BDGP Sequence Production Resources |
Search the DGRC for AT02348
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 23 |
Well: | 48 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG4169-RA |
Protein status: | AT02348.pep: gold |
Preliminary Size: | 1691 |
Sequenced Size: | 1689 |
Gene | Date | Evidence |
---|---|---|
CG4169 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4169 | 2002-02-26 | Blastp of sequenced clone |
CG4169 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4169 | 2008-04-29 | Release 5.5 accounting |
CG4169 | 2008-08-15 | Release 5.9 accounting |
CG4169 | 2008-12-18 | 5.12 accounting |
1689 bp (1689 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089228
> AT02348.complete GCCAAGGAAAAACATTTGTTAAATTTTTTCACTTAGTCAAATTATTCAAG ATCACGATATTTCGAAAATCCCGTGACTTACCATAAGTCACAGCTGGTAC TCGGTGTGACCATTTTGGAGCGCATTGAAAAACTAGGGCTTAGTTGAACC CCGTGCGACGGCCACACTAGCGCGAACGACCGTAAAAATTTTCGCTCTGC GAATATTTGTAAAAAATTGCTTAGAAAGCAAATAGAAGAAATTGTAGCAT AATCCACGCCATGGCCTGTAACGCTAGCAAGACGTCGCTCCTGCGCGCCA TCGCCAAACGAGGCTACGCCACCTGCCCGCGTCCCGTCGGCGACCTGTCC GCCGTGAACGTCAAGGTGCTGGAGAACAAACTGGTGGTAGCCACCGCCGA TGCAACTCTTCCCGTTTCGCGCGTCTCTTTGGTGCTGGGAGCCGGATCAC GAAACGAGTCCTACGACATCCAGGGAGCCTCGCACCTGCTTCGTTTGGCC GGAGGACTGAGCACCCAGAACTCGACCGCCTTCGCCATCGCCCGCAACAT CCAGCAGGTGGGCGGTACCCTGACCACATGGGGCGATCGCGAGCTCGTCG GCTACACGGTGACCACCACAGCAGACAACGCCGAGACTGGACTGCGCTAT CTGCAGGACCTGCTCCAGCCAGCCTTCAAGCCCTGGGAGTTGGTCGACAA TGCCAAAACGGTGGTCAACCAACTGAACGCCGTCTCCACGGAGGAACGCG CCATTGAGCTCGTTCACAAGGCCGCCTTCCGCAACGGCCTGGGCAACTCG ATCTACTCGCCCCGCTTCCAGTTGGGCAAGCTGTCCTCCGAGAGCCTGCT GCACTACGTGGCCCAGACCTTCGCAGCTGGCCGTGCCGCTGTCGTGGGCG TGGGAATCGACAACAACACGCTGGCCGGCTTCGCCCAGACCCTGCAGTTC CCCAGCGGCGGCAGCAAGGCTGCCTCCGCCAACTGGTATGGTGGAGATGC GCGCAAGGACACTTCTGGTCACCGTGCGGTCGTCGCCGTTGCTGGACAGG GCGCCGCCGCATCGAACCACAAGGAAGCGCTGGCATTCGCCATCCTGGAG CAGGCGCTCGGCGCCAAGGCCGCCACCAAGCGCGGCACTTCTGCTGGACT CTTTGGCGAGGCCGTCAACTGCGCCGGCGGCGTCGGAGCCTCTGTCAAGG CTGTGAATGCCAGCTACTCGGACGCTGGTCTGTTCGGTTTTGTGGTCTCC GCCGACTCCAAGGACATTGGCAAGACCGTGGAGTTCCTGGTGCGCGGCCT GAAGTCGGCTTCGGTGTCTGATAAGGATGTGGCCAGAGGCAAGGCTCTTC TGAAGGCGCGCATCATCTCGCGCTACTCGTCGGACGGTGGTCTAATTAAG GAGATCGGTCGCCAGGCGGCGCTCACCCGGAACGTGCTGGAGGCGGACGC CCTGCTTGGCGCAATCGATGGCATCTCGCAGTCGCAGGTCCAGGAGGCGG CCAAGAAGGTGGGCAGCTCCAAGCTGGCCGTCGGCGCCATCGGGCACCTG GCGAACGTGCCCTACGCCTCCGATTTGGCTTAAGTATATAAACACCTGTA CATCTGTTAACCGTAATGTAACGACTAAATAAACCTGATCAAGGGGATCG ATCCGCGAACGTAAATACTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4169-RA | 1789 | CG4169-RA | 75..1749 | 1..1675 | 8360 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16574952..16575880 | 742..1670 | 4645 | 100 | Plus |
chr3L | 24539361 | chr3L | 16574547..16574852 | 439..744 | 1530 | 100 | Plus |
chr3L | 24539361 | chr3L | 16573909..16574213 | 1..305 | 1525 | 100 | Plus |
chr3L | 24539361 | chr3L | 16574358..16574491 | 306..439 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16585183..16586116 | 742..1675 | 4655 | 99.9 | Plus |
3L | 28110227 | 3L | 16584778..16585083 | 439..744 | 1530 | 100 | Plus |
3L | 28110227 | 3L | 16584140..16584444 | 1..305 | 1525 | 100 | Plus |
3L | 28110227 | 3L | 16584589..16584722 | 306..439 | 670 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16578283..16579216 | 742..1675 | 4655 | 99.8 | Plus |
3L | 28103327 | 3L | 16577878..16578183 | 439..744 | 1530 | 100 | Plus |
3L | 28103327 | 3L | 16577240..16577544 | 1..305 | 1525 | 100 | Plus |
3L | 28103327 | 3L | 16577689..16577822 | 306..439 | 670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16573909..16574213 | 1..305 | 100 | -> | Plus |
chr3L | 16574358..16574491 | 306..439 | 100 | -> | Plus |
chr3L | 16574548..16574851 | 440..743 | 100 | -> | Plus |
chr3L | 16574954..16575880 | 744..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 1..1323 | 261..1583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 1..1323 | 261..1583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 1..1323 | 261..1583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 1..1323 | 261..1583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 1..1323 | 261..1583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 17..1686 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 17..1686 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 17..1686 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 17..1686 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4169-RA | 17..1686 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16584140..16584444 | 1..305 | 100 | -> | Plus |
3L | 16584589..16584722 | 306..439 | 100 | -> | Plus |
3L | 16584779..16585082 | 440..743 | 100 | -> | Plus |
3L | 16585185..16586111 | 744..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16584140..16584444 | 1..305 | 100 | -> | Plus |
3L | 16584589..16584722 | 306..439 | 100 | -> | Plus |
3L | 16584779..16585082 | 440..743 | 100 | -> | Plus |
3L | 16585185..16586111 | 744..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16584140..16584444 | 1..305 | 100 | -> | Plus |
3L | 16584589..16584722 | 306..439 | 100 | -> | Plus |
3L | 16584779..16585082 | 440..743 | 100 | -> | Plus |
3L | 16585185..16586111 | 744..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16577240..16577544 | 1..305 | 100 | -> | Plus |
arm_3L | 16577689..16577822 | 306..439 | 100 | -> | Plus |
arm_3L | 16577879..16578182 | 440..743 | 100 | -> | Plus |
arm_3L | 16578285..16579211 | 744..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16577240..16577544 | 1..305 | 100 | -> | Plus |
3L | 16577689..16577822 | 306..439 | 100 | -> | Plus |
3L | 16577879..16578182 | 440..743 | 100 | -> | Plus |
3L | 16578285..16579211 | 744..1670 | 100 | Plus |
Translation from 260 to 1582
> AT02348.hyp MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATL PVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQV GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQPAFKPWELVDNAKT VVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYV AQTFAAGRAAVVGVGIDNNTLAGFAQTLQFPSGGSKAASANWYGGDARKD TSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGE AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSA SVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLG AIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4169-PB | 440 | CG4169-PB | 1..440 | 1..440 | 2172 | 100 | Plus |
CG4169-PA | 440 | CG4169-PA | 1..440 | 1..440 | 2172 | 100 | Plus |
CG3731-PB | 470 | CG3731-PB | 29..456 | 20..434 | 208 | 21.6 | Plus |
CG3731-PA | 470 | CG3731-PA | 29..456 | 20..434 | 208 | 21.6 | Plus |
Translation from 260 to 1582
> AT02348.pep MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATL PVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQV GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQPAFKPWELVDNAKT VVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYV AQTFAAGRAAVVGVGIDNNTLAGFAQTLQFPSGGSKAASANWYGGDARKD TSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGE AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSA SVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLG AIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23920-PA | 439 | GF23920-PA | 1..439 | 1..440 | 1994 | 85.9 | Plus |
Dana\GF16898-PA | 470 | GF16898-PA | 37..456 | 28..434 | 197 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13564-PA | 440 | GG13564-PA | 1..440 | 1..440 | 2200 | 96.6 | Plus |
Dere\GG16882-PA | 470 | GG16882-PA | 29..456 | 20..434 | 206 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15899-PA | 443 | GH15899-PA | 1..443 | 1..440 | 1793 | 79 | Plus |
Dgri\GH18338-PA | 470 | GH18338-PA | 30..456 | 21..434 | 209 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
UQCR-C2-PB | 440 | CG4169-PB | 1..440 | 1..440 | 2172 | 100 | Plus |
UQCR-C2-PA | 440 | CG4169-PA | 1..440 | 1..440 | 2172 | 100 | Plus |
UQCR-C1-PB | 470 | CG3731-PB | 29..456 | 20..434 | 208 | 21.6 | Plus |
UQCR-C1-PA | 470 | CG3731-PA | 29..456 | 20..434 | 208 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16551-PA | 441 | GI16551-PA | 1..441 | 1..440 | 1666 | 76 | Plus |
Dmoj\GI23318-PA | 470 | GI23318-PA | 30..456 | 21..434 | 199 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17869-PA | 441 | GL17869-PA | 1..441 | 1..440 | 1904 | 83 | Plus |
Dper\GL23351-PA | 441 | GL23351-PA | 1..441 | 1..440 | 1797 | 78.9 | Plus |
Dper\GL23853-PA | 470 | GL23853-PA | 29..456 | 20..434 | 200 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18004-PA | 441 | GA18004-PA | 1..441 | 1..440 | 1911 | 83.2 | Plus |
Dpse\GA27229-PA | 441 | GA27229-PA | 1..440 | 1..439 | 1821 | 79.5 | Plus |
Dpse\GA17647-PA | 470 | GA17647-PA | 29..456 | 20..434 | 202 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25644-PA | 436 | GM25644-PA | 1..436 | 1..440 | 2199 | 97.3 | Plus |
Dsec\GM24191-PA | 470 | GM24191-PA | 29..456 | 20..434 | 202 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14647-PA | 407 | GD14647-PA | 1..407 | 1..440 | 1969 | 91.6 | Plus |
Dsim\GD18983-PA | 470 | GD18983-PA | 29..456 | 20..434 | 202 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12803-PA | 441 | GJ12803-PA | 1..441 | 1..440 | 1860 | 81.9 | Plus |
Dvir\GJ10322-PA | 470 | GJ10322-PA | 30..456 | 21..434 | 203 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20075-PA | 441 | GK20075-PA | 1..441 | 1..440 | 1825 | 81.4 | Plus |
Dwil\GK21348-PA | 559 | GK21348-PA | 74..539 | 9..439 | 237 | 22.4 | Plus |
Dwil\GK13463-PA | 470 | GK13463-PA | 29..456 | 20..434 | 209 | 22.3 | Plus |