BDGP Sequence Production Resources |
Search the DGRC for AT02512
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 25 |
Well: | 12 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG4406-RA |
Protein status: | AT02512.pep: gold |
Preliminary Size: | 981 |
Sequenced Size: | 1200 |
Gene | Date | Evidence |
---|---|---|
CG4406 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4406 | 2002-02-22 | Blastp of sequenced clone |
CG4406 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4406 | 2008-04-29 | Release 5.5 accounting |
CG4406 | 2008-08-15 | Release 5.9 accounting |
CG4406 | 2008-12-18 | 5.12 accounting |
1200 bp (1200 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089234
> AT02512.complete TCGATACTCGAGGCGTTGTTTATGTATCGGTCTATCGTCTTGTAGAAATG TTTAATATTATGCTTGTTAAATTTGTTGTCATCTTTGCCCTGATCCTCGC CAGCTGTCGGGTGGAGGCGGATAACACCTCGGTGTTGCCGGAGGGCTTTG TGGACGCCGCTCAGCGCTCTACACACACGAACAACTGGGCGGTGCTGGTG GACGCATCGAGATTCTGGTTCAACTACCGGCATGTGGCCAATGTGCTGTC TATCTACCGCTCGGTAAAGAGACTGGGCATTCCTGACTCCCAGATCATAC TGATGATCGCCGACGACATGGCCTGCAATGCTAGGAACCCACGGCCCGGC CAGGTGTACAATAACGCCAACCAGCACATCAATGTGTACGGAGACGATGT AGAGGTGGATTACCGCGGCTACGAGGTGACAGTTGAGAACTTTGTGCGTC TGCTAACTGGGCGCACCCAGAACGGCACGGCGCGCTCGAAGAAGCTGCTC TCGGACGCGGGCAGCAATGTGCTCATCTACCTAACCGGACACGGCGGCGA TGGATTCCTCAAGTTCCAGGACTCGGAGGAGATAACCAGCCAGGAGTTGG CCGACGGCATCCAACAGATGTGGGAGAAAAAGCGGTACAATGAGCTATTC TTCATGGTGGACACTTGCCAAGCAGCTTCGCTCTATGAGAAGTTCACCTC GCCGAATGTCCTGGCAGTGGCTAGCAGTCTTGTTGGCGAGGATTCCTTAT CGCACCATGTGGATCCATCGATTGGAGTCTACATGATAGACCGGTACACC TACTACGCCTTGGAGTTCCTGGAGAAGGTGCAGCCCTTTAGCAAACGGAC CATAGGCGAATTTCTGCAAGTGTGCCCCAAGAGAGTGTGCATTTCGACAG TGGGAGTGCGCAAGGATCTGTACCCCCGGGATCCGCACAAGGTGCCCATC ACAGACTTCTTTGGAGCCATACGTCCCACACGGGTATCCACCGATCGCAT CAATGTGACCTTGGCCAATGAGGATGATTTCATTTTCGACAAAGATAAGA TGGTGACCAAAAAGCCCTTCAAAATCGTGATGGAGTCACAGTTTCCTTCC GAGCTTTTTAAATAGTCTGGATAACTTAATATGATTCATGTGATAATATT AATTTTATTCGTAAATACATCATTTCATTATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4406-RA | 1310 | CG4406-RA | 56..1239 | 1..1184 | 5920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1902603..1903238 | 636..1 | 3180 | 100 | Minus |
chrX | 22417052 | chrX | 1902024..1902184 | 1024..864 | 805 | 100 | Minus |
chrX | 22417052 | chrX | 1901806..1901963 | 1182..1025 | 790 | 100 | Minus |
chrX | 22417052 | chrX | 1902409..1902527 | 752..634 | 595 | 100 | Minus |
chrX | 22417052 | chrX | 1902246..1902357 | 863..752 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2008708..2009343 | 636..1 | 3180 | 100 | Minus |
X | 23542271 | X | 2008129..2008289 | 1024..864 | 805 | 100 | Minus |
X | 23542271 | X | 2007909..2008068 | 1184..1025 | 800 | 100 | Minus |
X | 23542271 | X | 2008514..2008632 | 752..634 | 595 | 100 | Minus |
X | 23542271 | X | 2008351..2008462 | 863..752 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2016806..2017441 | 636..1 | 3180 | 100 | Minus |
X | 23527363 | X | 2016227..2016387 | 1024..864 | 805 | 100 | Minus |
X | 23527363 | X | 2016007..2016166 | 1184..1025 | 800 | 100 | Minus |
X | 23527363 | X | 2016612..2016730 | 752..634 | 595 | 100 | Minus |
X | 23527363 | X | 2016449..2016560 | 863..752 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 465..542 | 89..13 | 136 | 67.5 | Minus |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1688..1772 | 797..885 | 128 | 65.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1902409..1902526 | 635..752 | 100 | <- | Minus |
chrX | 1902024..1902184 | 864..1024 | 100 | <- | Minus |
chrX | 1902246..1902356 | 753..863 | 100 | <- | Minus |
chrX | 1901806..1901963 | 1025..1182 | 100 | <- | Minus |
chrX | 1902605..1903238 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1068 | 48..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1068 | 48..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1068 | 48..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1068 | 48..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1068 | 48..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 22..1203 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4406-RA | 22..1203 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2007911..2008068 | 1025..1182 | 100 | <- | Minus |
X | 2008129..2008289 | 864..1024 | 100 | <- | Minus |
X | 2008351..2008461 | 753..863 | 100 | <- | Minus |
X | 2008514..2008631 | 635..752 | 100 | <- | Minus |
X | 2008710..2009343 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2007911..2008068 | 1025..1182 | 100 | <- | Minus |
X | 2008129..2008289 | 864..1024 | 100 | <- | Minus |
X | 2008351..2008461 | 753..863 | 100 | <- | Minus |
X | 2008514..2008631 | 635..752 | 100 | <- | Minus |
X | 2008710..2009343 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2007911..2008068 | 1025..1182 | 100 | <- | Minus |
X | 2008129..2008289 | 864..1024 | 100 | <- | Minus |
X | 2008351..2008461 | 753..863 | 100 | <- | Minus |
X | 2008514..2008631 | 635..752 | 100 | <- | Minus |
X | 2008710..2009343 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1901944..1902101 | 1025..1182 | 100 | <- | Minus |
arm_X | 1902162..1902322 | 864..1024 | 100 | <- | Minus |
arm_X | 1902384..1902494 | 753..863 | 100 | <- | Minus |
arm_X | 1902547..1902664 | 635..752 | 100 | <- | Minus |
arm_X | 1902743..1903376 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2016808..2017441 | 1..634 | 100 | Minus | |
X | 2016009..2016166 | 1025..1182 | 100 | <- | Minus |
X | 2016227..2016387 | 864..1024 | 100 | <- | Minus |
X | 2016449..2016559 | 753..863 | 100 | <- | Minus |
X | 2016612..2016729 | 635..752 | 100 | <- | Minus |
Translation from 2 to 1114
> AT02512.hyp DTRGVVYVSVYRLVEMFNIMLVKFVVIFALILASCRVEADNTSVLPEGFV DAAQRSTHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIIL MIADDMACNARNPRPGQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRL LTGRTQNGTARSKKLLSDAGSNVLIYLTGHGGDGFLKFQDSEEITSQELA DGIQQMWEKKRYNELFFMVDTCQAASLYEKFTSPNVLAVASSLVGEDSLS HHVDPSIGVYMIDRYTYYALEFLEKVQPFSKRTIGEFLQVCPKRVCISTV GVRKDLYPRDPHKVPITDFFGAIRPTRVSTDRINVTLANEDDFIFDKDKM VTKKPFKIVMESQFPSELFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4406-PA | 355 | CG4406-PA | 1..355 | 16..370 | 1845 | 100 | Plus |
Translation from 47 to 1114
> AT02512.pep MFNIMLVKFVVIFALILASCRVEADNTSVLPEGFVDAAQRSTHTNNWAVL VDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRP GQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKKL LSDAGSNVLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNEL FFMVDTCQAASLYEKFTSPNVLAVASSLVGEDSLSHHVDPSIGVYMIDRY TYYALEFLEKVQPFSKRTIGEFLQVCPKRVCISTVGVRKDLYPRDPHKVP ITDFFGAIRPTRVSTDRINVTLANEDDFIFDKDKMVTKKPFKIVMESQFP SELFK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21988-PA | 354 | GF21988-PA | 4..354 | 5..355 | 1732 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12662-PA | 351 | GG12662-PA | 1..351 | 5..355 | 1847 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12598-PA | 349 | GH12598-PA | 1..349 | 5..355 | 1662 | 88.6 | Plus |
Dgri\GH24411-PA | 270 | GH24411-PA | 1..269 | 86..354 | 1328 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-K-PA | 355 | CG4406-PA | 1..355 | 1..355 | 1845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15431-PA | 334 | GI15431-PA | 5..334 | 26..355 | 1645 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15131-PA | 355 | GL15131-PA | 2..355 | 3..355 | 1722 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18163-PA | 355 | GA18163-PA | 2..355 | 3..355 | 1722 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18930-PA | 355 | GM18930-PA | 1..355 | 1..355 | 1894 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16397-PA | 331 | GD16397-PA | 1..331 | 1..355 | 1721 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14719-PA | 350 | GJ14719-PA | 1..350 | 5..355 | 1668 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25748-PA | 356 | GK25748-PA | 1..349 | 5..355 | 1658 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16991-PA | 351 | GE16991-PA | 1..351 | 5..355 | 1858 | 98 | Plus |