Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT02704.complete Sequence
1346 bp (1346 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089237
> AT02704.complete
AAAACAATGAACTTCATCTCGTTCAGCGTAATTAGCCGCTTTGACTTTTT
TTGGTTGGACGTGCTTAAGCAATTGGATCTGAAGTCTCGCATTAGCTTTG
CAGCCAGTTGCGATATGTTTGAGAACATCTATGTTAGGAGTTCTCCTCTA
CGCCTGAGCCGCGTAGTTAATTTGGAGGAAATGATTGAGTTCTCATTGCT
TGAAACCAAACTATTTGTGGAACTTTCGGGTTCTGACATTGAGATTATAC
GCGGAGGTCCACATACCCCAATGTTTTCACATTTCGAGGATTTCATACGC
CTGATGTCGATCCGGCTAACGAAGGTGAATGAGATTGCTCTCGAGGGATT
CCAACTCACGCAATACAAGTGGTTCAACGCTCCCGAAACCAGCTTCAGCA
ACTTGACCTATGTTAGCTTGCGTCGTTGTCAGCTCAATGATGAGAACCTT
GTGGGCTGGGAGTTCTTGACTCATCTGGAGACATTGGATCTGAGATACAA
CGATCGATTGACTGGGAGCTGTTTGATGAGTCTTCCAACTTCGTTGTTGT
CCCTTTATATAACCGGCTGCCGGAATTTGTGCCCGAATCAACTAATATTC
CTGAACCGTATACCACGACTACGCGAGCTGCGTGCCTCGGACCTGATGCC
CGGCGGGCACTGGCATATCTATCGTGACCTGGTGCTGGCTTGTCCCTTGC
TGGTGATGGTCGAGATATCAATTTGCTCCCTAAACCGGGATGAGTATAGG
CTGGGTGAGCTGCGCTATCTGCAGTCGTTGGTCATTAAAGCTCACTCCAC
AGACACAATTCGCTGTAAGGTCAGCGACTGGATGCTGATTTCCCTATTGG
ATGTGCCCTTTCTGCGAAACCTGATGTTTTCAGATGCACCGAGTGGCTTT
GTTAGCGCAAATGCCCTGTCGATTATATCGAGATTTCGGCAGCTGCGTGT
TCTGAAAATGCCGAATCAGCCATACCGGCCCAATGACCTCTTAAGATTGA
GGAATCTAACTTTTCTTGAGACGCTGGACCTCAGCAATTCACCCTATATC
ACTAATGAGGTTGTCATCGAACTGGTCATAGGAATTCCCAACCTTAGTGT
GTTAATAGTCCAAGGATGTCCTCTGCTCACAAATCGTGTATACCTTGATG
CAGAATTGGCCAGTAAGAAAAGGAGCAATGGGAACATGGTCAAGGTGCAG
CTATAGACTGACTCGAAAGAACGTCCAAATGCGTAATTCAGCAACAACAT
AACAAAATCGGCATCCATATTAAAACAAATTGTACTTATCATTGTAATAA
TAAATGACTTATCATAATAATAAATGAAAAAAAAAAAAAAAAAAAA
AT02704.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15056-RA | 1452 | CG15056-RA | 106..1432 | 1..1327 | 6635 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:23:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 18304800..18306103 | 23..1326 | 6490 | 99.8 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:38:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18415608..18416912 | 23..1327 | 6525 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 18423706..18425010 | 23..1327 | 6525 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 07:23:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 6216..6346 | 1190..1323 | 121 | 58.5 | Plus |
AT02704.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:23:57 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 18304705..18304730 | 1..26 | 100 | -> | Plus |
chrX | 18304804..18306103 | 27..1326 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:49:51 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1200 | 7..1206 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:34:44 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1200 | 7..1206 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:40:11 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1200 | 7..1206 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:06:45 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1200 | 7..1206 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:31:53 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1200 | 7..1206 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:00:26 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1326 | 1..1326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:34:44 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1326 | 1..1326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:40:11 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1326 | 1..1326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:06:45 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 1..1326 | 1..1326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:31:53 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15056-RA | 99..1424 | 1..1326 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:57 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18415513..18415538 | 1..26 | 100 | -> | Plus |
X | 18415612..18416911 | 27..1326 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:57 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18415513..18415538 | 1..26 | 100 | -> | Plus |
X | 18415612..18416911 | 27..1326 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:23:57 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18415513..18415538 | 1..26 | 100 | -> | Plus |
X | 18415612..18416911 | 27..1326 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:40:11 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18309546..18309571 | 1..26 | 100 | -> | Plus |
arm_X | 18309645..18310944 | 27..1326 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:40:35 Download gff for
AT02704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18423710..18425009 | 27..1326 | 100 | | Plus |
X | 18423611..18423636 | 1..26 | 100 | -> | Plus |
AT02704.hyp Sequence
Translation from 1 to 1205
> AT02704.hyp
KTMNFISFSVISRFDFFWLDVLKQLDLKSRISFAASCDMFENIYVRSSPL
RLSRVVNLEEMIEFSLLETKLFVELSGSDIEIIRGGPHTPMFSHFEDFIR
LMSIRLTKVNEIALEGFQLTQYKWFNAPETSFSNLTYVSLRRCQLNDENL
VGWEFLTHLETLDLRYNDRLTGSCLMSLPTSLLSLYITGCRNLCPNQLIF
LNRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYR
LGELRYLQSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGF
VSANALSIISRFRQLRVLKMPNQPYRPNDLLRLRNLTFLETLDLSNSPYI
TNEVVIELVIGIPNLSVLIVQGCPLLTNRVYLDAELASKKRSNGNMVKVQ
L*
AT02704.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:45:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15056-PA | 399 | CG15056-PA | 1..399 | 3..401 | 2045 | 100 | Plus |
CG14891-PA | 495 | CG14891-PA | 118..481 | 15..380 | 435 | 33.2 | Plus |
AT02704.pep Sequence
Translation from 6 to 1205
> AT02704.pep
MNFISFSVISRFDFFWLDVLKQLDLKSRISFAASCDMFENIYVRSSPLRL
SRVVNLEEMIEFSLLETKLFVELSGSDIEIIRGGPHTPMFSHFEDFIRLM
SIRLTKVNEIALEGFQLTQYKWFNAPETSFSNLTYVSLRRCQLNDENLVG
WEFLTHLETLDLRYNDRLTGSCLMSLPTSLLSLYITGCRNLCPNQLIFLN
RIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYRLG
ELRYLQSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGFVS
ANALSIISRFRQLRVLKMPNQPYRPNDLLRLRNLTFLETLDLSNSPYITN
EVVIELVIGIPNLSVLIVQGCPLLTNRVYLDAELASKKRSNGNMVKVQL*
AT02704.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:14:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22436-PA | 552 | GF22436-PA | 120..517 | 13..393 | 422 | 33 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:14:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19164-PA | 430 | GG19164-PA | 39..429 | 7..398 | 1042 | 53.9 | Plus |
Dere\GG21665-PA | 502 | GG21665-PA | 120..488 | 13..378 | 487 | 34.3 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:14:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH22715-PA | 647 | GH22715-PA | 149..510 | 19..381 | 248 | 26.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15056-PA | 399 | CG15056-PA | 1..399 | 1..399 | 2045 | 100 | Plus |
CG14891-PA | 495 | CG14891-PA | 118..481 | 13..378 | 435 | 33.2 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:14:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI15616-PA | 669 | GI15616-PA | 155..509 | 19..381 | 204 | 26.1 | Plus |
Dmoj\GI18500-PA | 458 | GI18500-PA | 126..445 | 7..328 | 184 | 24 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:14:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17393-PA | 675 | GD17393-PA | 292..675 | 15..399 | 1367 | 69.3 | Plus |
Dsim\GD19110-PA | 492 | GD19110-PA | 109..478 | 4..378 | 387 | 31.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:14:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ21363-PA | 656 | GJ21363-PA | 159..518 | 19..381 | 277 | 27.3 | Plus |
Dvir\GJ17296-PA | 673 | GJ17296-PA | 165..519 | 19..381 | 204 | 25.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:14:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK15085-PA | 529 | GK15085-PA | 132..484 | 19..378 | 153 | 26 | Plus |