BDGP Sequence Production Resources |
Search the DGRC for AT03047
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 30 |
Well: | 47 |
Vector: | pOTB7 |
Associated Gene/Transcript | Decay-RA |
Protein status: | AT03047.pep: gold |
Preliminary Size: | 927 |
Sequenced Size: | 1472 |
Gene | Date | Evidence |
---|---|---|
CG14902 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14902 | 2002-02-22 | Blastp of sequenced clone |
CG14902 | 2003-01-01 | Sim4 clustering to Release 3 |
decay | 2008-04-29 | Release 5.5 accounting |
decay | 2008-08-15 | Release 5.9 accounting |
decay | 2008-12-18 | 5.12 accounting |
1472 bp (1472 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089242
> AT03047.complete AGCGACACTTTCGCCGGAAGTTGCCAATTTCCCTGACGAGCGCCCACTTT TGTGGGCGTGAACCCGTCGGGGAAATCAAATTGTCTGGTGCAATGGCAAA GGGAATTGTATTTTGCTACCAATAAACGTAACTTCCCCTCGAGCAGGCTA ATCAACGTTGGGCAAGAGCCCGAAAAATACCGCGGCGAGCGAGAGAAGAA TCCACCCCAGCAAGCTCAAGGTGATAAGACGGCTGCATTGATTAGATAAG ATGTTAGGCGAACGGGAGCGAGAGCTTTTTTTTGTCGTTTGATAGGTGAA AACTTCCAATCGCGCTTAGTCACAGGTTGCTGCCAAAGCGCGCGGACGGT CAGAAATGGACGACACCGACTTCTCGCTCTTCGGGCAGAAGAACAAGCAC AAGAAGGACAAGGCGGATGCCACCAAGATCGCCCATACGCCCACATCGGA GCTGGACCTCAAAAGGATCATAATCTCGCGCCCCACCAACGAGGACACAT ACGAGAATTGCGCGCGAGCGGGCATTGCGCTAATCCTGAACCACAAGGAT GTCAAGGGACAGAAGCAGCGCGTGGGCACCGAACGGGATCGCGATGACAT GGAGGCGACGCTGCAGGGATTCGGATTCGATGTACGCACCTTCGACGATC TGACCTTCTCCGAGATCAACGACACGCTCAAAGAGGTTGCTCGCGAGGAT CACAGTCAAAACGACTGCTTTGTGTTGGCGGTGATGTCACACGGCACCGA AGGCAAGGTCTACGCTAAGGACATGTCATATCCTGTGGAGCGCCTTTGGA ATCCCTTCCTCGGCGACAACTGCAAGACGCTCAAGAACAAACCCAAACTC TTCTTCATCCAGGCCTGTCGCGGAGCCAACCTGGAAAAGGCAGTCGAGTT CTCCAGCTTCGCTGTGATGACCAGGGAACTGGTCCCGGAGCCCGCTGCCG CCGTTCAGCCCATCACCTATGCCATTCCCAGCACGGCGGACATCCTCGTC TTCTACTCCACATTCGACAAATTCTTCTCATTCCGTAACGTTGACGATGG CTCCTGGTTCATCCAGAGCTTGTGCCGCGTCCTCGACCAGGCCGCCGCCA ACGAAGCTGCCACGCCGGAGGGCGTCGAGCTACTCCGCCTGCTGACCGCA GTGAATCGGAAGGTGGCCTACGAGTACCAGTCGAATACGAAGAACGAGGC CCTCAACCAGATGAAGGAAATGCCCAACTTTATGTCGACACTGACCAAAA CATTCCAGCTGCGTGTTAAGCCCAAGACCTGAGCTCCGGTCACGAAATCA GCGACAATCCAATCGGGACTGTGAGTCAGTCCGCGGGTCAAGAACGAGGG ACGCCACAACTCTTTCATTTAATCGTAATGTTTGCAATTTGTTAATAGAA ATACATATCGATGGCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
decay-RA | 1775 | decay-RA | 315..1734 | 1..1420 | 7070 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12325341..12326026 | 686..1 | 3415 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 12323729..12324128 | 1419..1020 | 1985 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 12324434..12324767 | 1019..686 | 1670 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16500673..16501358 | 686..1 | 3430 | 100 | Minus |
3R | 32079331 | 3R | 16499057..16499457 | 1420..1020 | 1990 | 99.8 | Minus |
3R | 32079331 | 3R | 16499763..16500096 | 1019..686 | 1655 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16241504..16242189 | 686..1 | 3430 | 100 | Minus |
3R | 31820162 | 3R | 16239888..16240288 | 1420..1020 | 1990 | 99.7 | Minus |
3R | 31820162 | 3R | 16240594..16240927 | 1019..686 | 1655 | 99.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12323729..12324128 | 1020..1419 | 99 | <- | Minus |
chr3R | 12324434..12324766 | 687..1019 | 100 | <- | Minus |
chr3R | 12325341..12326026 | 1..686 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 1..927 | 356..1282 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 1..927 | 356..1282 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 1..927 | 356..1282 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 1..927 | 356..1282 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Decay-RA | 1..927 | 356..1282 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 315..1733 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 315..1733 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 1..1111 | 309..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
decay-RA | 315..1733 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Decay-RA | 1..1111 | 309..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16499058..16499457 | 1020..1419 | 99 | <- | Minus |
3R | 16499763..16500095 | 687..1019 | 99 | <- | Minus |
3R | 16500673..16501358 | 1..686 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16499058..16499457 | 1020..1419 | 99 | <- | Minus |
3R | 16499763..16500095 | 687..1019 | 99 | <- | Minus |
3R | 16500673..16501358 | 1..686 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16499058..16499457 | 1020..1419 | 99 | <- | Minus |
3R | 16499763..16500095 | 687..1019 | 99 | <- | Minus |
3R | 16500673..16501358 | 1..686 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12324780..12325179 | 1020..1419 | 99 | <- | Minus |
arm_3R | 12325485..12325817 | 687..1019 | 99 | <- | Minus |
arm_3R | 12326395..12327080 | 1..686 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16240594..16240926 | 687..1019 | 99 | <- | Minus |
3R | 16239889..16240288 | 1020..1419 | 99 | <- | Minus |
3R | 16241504..16242189 | 1..686 | 100 | Minus |
Translation from 355 to 1281
> AT03047.pep MDDTDFSLFGQKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYE NCARAGIALILNHKDVKGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLT FSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVYAKDMSYPVERLWNP FLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRELVPEPAAAV QPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANE AATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTF QLRVKPKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17937-PA | 309 | GF17937-PA | 1..309 | 1..308 | 1423 | 89.3 | Plus |
Dana\GF13064-PA | 326 | GF13064-PA | 82..320 | 56..306 | 444 | 36.2 | Plus |
Dana\GF18666-PA | 338 | GF18666-PA | 93..327 | 56..302 | 435 | 36.8 | Plus |
Dana\GF13826-PA | 525 | GF13826-PA | 328..519 | 72..300 | 178 | 27.3 | Plus |
Dana\GF10584-PA | 450 | GF10584-PA | 195..402 | 56..249 | 168 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16826-PA | 308 | GG16826-PA | 1..308 | 1..308 | 1602 | 96.4 | Plus |
Dere\GG22866-PA | 323 | GG22866-PA | 45..317 | 20..306 | 439 | 33.4 | Plus |
Dere\GG10839-PA | 531 | GG10839-PA | 315..525 | 54..300 | 214 | 28 | Plus |
Dere\GG15422-PA | 451 | GG15422-PA | 187..402 | 48..247 | 182 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17516-PA | 309 | GH17516-PA | 1..309 | 1..308 | 1305 | 80.9 | Plus |
Dgri\GH20516-PA | 309 | GH20516-PA | 1..309 | 1..308 | 1302 | 80.6 | Plus |
Dgri\GH19956-PA | 351 | GH19956-PA | 105..344 | 56..307 | 441 | 37.6 | Plus |
Dgri\GH19945-PA | 294 | GH19945-PA | 48..288 | 56..308 | 438 | 37.5 | Plus |
Dgri\GH21208-PA | 318 | GH21208-PA | 50..316 | 33..308 | 397 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Decay-PA | 308 | CG14902-PA | 1..308 | 1..308 | 1599 | 100 | Plus |
Dcp-1-PA | 323 | CG5370-PA | 47..317 | 22..306 | 410 | 34 | Plus |
Drice-PA | 339 | CG7788-PA | 94..331 | 56..305 | 405 | 35.6 | Plus |
Dronc-PA | 450 | CG8091-PA | 196..397 | 56..243 | 186 | 27.3 | Plus |
Strica-PB | 527 | CG7863-PB | 317..484 | 60..246 | 185 | 31.1 | Plus |
Strica-PA | 527 | CG7863-PA | 317..484 | 60..246 | 185 | 31.1 | Plus |
Dredd-PD | 488 | CG7486-PD | 258..477 | 55..295 | 179 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10391-PA | 539 | GI10391-PA | 1..268 | 1..267 | 1115 | 77.6 | Plus |
Dmoj\GI20496-PA | 318 | GI20496-PA | 70..312 | 51..306 | 456 | 37.8 | Plus |
Dmoj\GI22043-PA | 345 | GI22043-PA | 100..340 | 56..308 | 456 | 37.9 | Plus |
Dmoj\GI22869-PA | 295 | GI22869-PA | 67..295 | 56..302 | 376 | 35.7 | Plus |
Dmoj\GI21266-PA | 556 | GI21266-PA | 359..511 | 72..243 | 187 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27295-PA | 308 | GL27295-PA | 1..308 | 1..308 | 1502 | 90.3 | Plus |
Dper\GL16870-PA | 323 | GL16870-PA | 79..317 | 56..306 | 423 | 35 | Plus |
Dper\GL23515-PA | 344 | GL23515-PA | 99..333 | 56..302 | 419 | 36 | Plus |
Dper\GL11317-PA | 257 | GL11317-PA | 19..253 | 56..306 | 376 | 32.4 | Plus |
Dper\GL12563-PA | 457 | GL12563-PA | 202..410 | 56..249 | 207 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13340-PA | 308 | GA13340-PA | 1..308 | 1..308 | 1502 | 90.3 | Plus |
Dpse\GA18828-PA | 323 | GA18828-PA | 79..317 | 56..306 | 423 | 35 | Plus |
Dpse\GA20588-PA | 344 | GA20588-PA | 99..333 | 56..302 | 420 | 36 | Plus |
Dpse\GA24681-PA | 261 | GA24681-PA | 19..257 | 56..306 | 403 | 34.6 | Plus |
Dpse\GA20817-PA | 457 | GA20817-PA | 202..410 | 56..249 | 202 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15423-PA | 308 | GM15423-PA | 1..308 | 1..308 | 1641 | 98.4 | Plus |
Dsec\GM16025-PA | 323 | GM16025-PA | 59..317 | 35..306 | 426 | 33.8 | Plus |
Dsec\GM12823-PA | 343 | GM12823-PA | 98..332 | 56..302 | 417 | 35.6 | Plus |
Dsec\GM16490-PA | 526 | GM16490-PA | 316..520 | 60..300 | 213 | 29.9 | Plus |
Dsec\GM25197-PA | 449 | GM25197-PA | 188..400 | 48..247 | 175 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20281-PA | 302 | GD20281-PA | 1..302 | 1..308 | 1476 | 88.6 | Plus |
Dsim\GD11774-PA | 323 | GD11774-PA | 59..317 | 35..306 | 426 | 33.8 | Plus |
Dsim\GD21467-PA | 343 | GD21467-PA | 98..335 | 56..305 | 415 | 35.6 | Plus |
Dsim\GD14228-PA | 449 | GD14228-PA | 188..400 | 48..247 | 184 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22849-PA | 310 | GJ22849-PA | 1..309 | 1..307 | 1429 | 85.1 | Plus |
Dvir\GJ24096-PA | 345 | GJ24096-PA | 100..339 | 56..307 | 445 | 37.3 | Plus |
Dvir\GJ22346-PA | 314 | GJ22346-PA | 35..310 | 20..308 | 417 | 32.5 | Plus |
Dvir\GJ19552-PA | 271 | GJ19552-PA | 27..265 | 56..305 | 383 | 36.1 | Plus |
Dvir\GJ23418-PA | 300 | GJ23418-PA | 40..292 | 36..302 | 334 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11868-PA | 311 | GK11868-PA | 1..311 | 1..308 | 1366 | 83.9 | Plus |
Dwil\GK11928-PA | 346 | GK11928-PA | 100..338 | 56..305 | 436 | 37.5 | Plus |
Dwil\GK23280-PA | 330 | GK23280-PA | 85..324 | 56..306 | 424 | 35.4 | Plus |
Dwil\GK11926-PA | 256 | GK11926-PA | 18..253 | 56..302 | 420 | 36 | Plus |
Dwil\GK11927-PA | 255 | GK11927-PA | 18..252 | 56..302 | 406 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26146-PA | 308 | GE26146-PA | 1..308 | 1..308 | 1630 | 98.1 | Plus |
Dyak\GE14302-PA | 325 | GE14302-PA | 81..319 | 56..306 | 430 | 35 | Plus |
Dyak\GE23886-PA | 339 | GE23886-PA | 94..332 | 56..306 | 427 | 35.8 | Plus |
Dyak\GE19433-PA | 526 | GE19433-PA | 316..520 | 60..300 | 211 | 29.5 | Plus |
Dyak\GE21731-PA | 451 | GE21731-PA | 197..402 | 56..247 | 204 | 29.1 | Plus |
Translation from 355 to 1281
> AT03047.hyp MDDTDFSLFGQKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYE NCARAGIALILNHKDVKGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLT FSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVYAKDMSYPVERLWNP FLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRELVPEPAAAV QPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANE AATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTF QLRVKPKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Decay-PA | 308 | CG14902-PA | 1..308 | 1..308 | 1599 | 100 | Plus |
Dcp-1-PA | 323 | CG5370-PA | 47..317 | 22..306 | 410 | 34 | Plus |
Drice-PA | 339 | CG7788-PA | 94..331 | 56..305 | 405 | 35.6 | Plus |
Dronc-PA | 450 | CG8091-PA | 196..397 | 56..243 | 186 | 27.3 | Plus |
Strica-PB | 527 | CG7863-PB | 317..484 | 60..246 | 185 | 31.1 | Plus |