BDGP Sequence Production Resources |
Search the DGRC for AT03272
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 32 |
Well: | 72 |
Vector: | pOTB7 |
Associated Gene/Transcript | Nmnat-RA |
Protein status: | AT03272.pep: gold |
Sequenced Size: | 1304 |
Gene | Date | Evidence |
---|---|---|
Nmnat | 2008-04-29 | Release 5.5 accounting |
Nmnat | 2008-04-29 | Picked prior to 5.5 |
Nmnat | 2008-08-15 | Release 5.9 accounting |
Nmnat | 2008-12-18 | 5.12 accounting |
1304 bp assembled on 2007-09-24
GenBank Submission: BT030750
> AT03272.complete AATAACAACAAGCCGAACAGATGATTGTGAAAATCAGCTGGCCCAAGAAC AACATAACAAGCGAATGCTTCCGGCGGTTTGGATCTTTTAAAAGACGCTC AAAATCGAAGAAAATGTCAGCATTCATCGAGGAAACAAAAAGCCTGCTGC CGCGGATCGCCTTCATAGCCTGCGGATGCTTCAGTCCACCCACACCCATG CACCTTCGGATGTTCGAGATAGCCAAGGACCACTTCGAAATGCAGGGAAC CCACAGAGTGGTAGGTGGCATCATCTCGCCCACGCACGACTCATATGGCA AAAAGGGTCTGGCCTCCGCCTTGGACAGATGTGCCATGGTCAAGCTGGCC ACCCAGAGCTCCAATTGGATTCGGTTGTCCGATTGGGAGGTGCACCAGAA TCAGTGGATGCGCACGCAGGCGGTGCTCCAGCACCACCAGAACTATATCA ATAACCACATAAATTCCGGCGGGGGAGGCGGAGATGACGGGGAGAACACA CATCTACCCGGATGGCTGCCTCGTGGGTTGCACGACAGTCGGGATCCTGT ACATCTGAAGCTACTGTGCGGTGCCGATCTGCTGGAGTCCTTTGCTGTTC CAGGCCTATGGGCAGAGGCCGATATTGAGGACATTGTGGCTAACCATGGT TTGGTAGTTATCACCCGGGCCGGCTCAAACCCAGGAAAATTCATCTTTGA CTCCGACATATTGACCAAGTATCAGAGCAACATTACGCTAATCACCAACT GGGTGCCTAATGAGGTGAGCTCCACGTTGATTCGGCGGCTCTTAGGACGC GGCCAGTCGGTCAAGTACCTTCTAGACGATCTGGTGCTGGAGTACATCAA GCGCCAACGATTGTTTAACTTTAAATCTAAGTATATAACGGATGCGGTGC GTCCCAACCATTTGCTCTTTAACCACGCCTATACGGACAACAACAAGAAC GCGAACAGCTACTCTATAGGCGACCAGCTGGAGCAGGACATGGACGAGTC GGACACTCCAAGCCCGCAACTGCAGCATACGCCTACGTCGCGGGTTTTCT GCTGCGGGGAGGTGCCTTTACGTGGATCCAAGGTGCTGCGATCCGGTCCT GGACAAGCGGTGCAGGTCATCACCATGCAGGCAGATGAGAAAGAGGAGAG CCAAGCAAAGAAGCAGAAGATTTCCCAAGTGCAACTTTAGGAAACTGGAA GACGAATCTCACGCGGATTAAGACAGGGGCGCTGGAAGCTATTTGTTGAT ATTATATAAATATGCAAAATAAACACGTTCGTTACCAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nmnat.a | 1410 | Nmnat.a | 120..1407 | 1..1288 | 6440 | 100 | Plus |
Nmnat-RA | 1392 | Nmnat-RA | 102..1389 | 1..1288 | 6440 | 100 | Plus |
Nmnat.b | 947 | Nmnat.b | 2..878 | 1..877 | 4385 | 100 | Plus |
Nmnat.b | 947 | Nmnat.b | 879..947 | 948..1016 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20768711..20769118 | 216..623 | 2040 | 100 | Plus |
chr3R | 27901430 | chr3R | 20770070..20770340 | 878..1148 | 1355 | 100 | Plus |
chr3R | 27901430 | chr3R | 20768424..20768639 | 1..216 | 1080 | 100 | Plus |
chr3R | 27901430 | chr3R | 20769326..20769481 | 722..877 | 780 | 100 | Plus |
chr3R | 27901430 | chr3R | 20770447..20770586 | 1147..1286 | 700 | 100 | Plus |
chr3R | 27901430 | chr3R | 20769170..20769271 | 624..725 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24945525..24945932 | 216..623 | 2040 | 100 | Plus |
3R | 32079331 | 3R | 24946884..24947154 | 878..1148 | 1355 | 100 | Plus |
3R | 32079331 | 3R | 24945238..24945453 | 1..216 | 1080 | 100 | Plus |
3R | 32079331 | 3R | 24946140..24946295 | 722..877 | 780 | 100 | Plus |
3R | 32079331 | 3R | 24947261..24947402 | 1147..1288 | 710 | 100 | Plus |
3R | 32079331 | 3R | 24945984..24946085 | 624..725 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24686356..24686763 | 216..623 | 2040 | 100 | Plus |
3R | 31820162 | 3R | 24687715..24687985 | 878..1148 | 1355 | 100 | Plus |
3R | 31820162 | 3R | 24686069..24686284 | 1..216 | 1080 | 100 | Plus |
3R | 31820162 | 3R | 24686971..24687126 | 722..877 | 780 | 100 | Plus |
3R | 31820162 | 3R | 24688092..24688233 | 1147..1288 | 710 | 100 | Plus |
3R | 31820162 | 3R | 24686815..24686916 | 624..725 | 510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20769170..20769271 | 624..725 | 100 | -> | Plus |
chr3R | 20769330..20769481 | 726..877 | 100 | -> | Plus |
chr3R | 20770070..20770340 | 878..1148 | 100 | -> | Plus |
chr3R | 20770449..20770586 | 1149..1286 | 100 | Plus | |
chr3R | 20768424..20768639 | 1..216 | 100 | -> | Plus |
chr3R | 20768712..20769118 | 217..623 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 1..1170 | 21..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 1..1170 | 21..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 1..1170 | 21..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 1..1170 | 21..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 1..1170 | 21..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 2..1287 | 1..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 2..1287 | 1..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 2..1287 | 1..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 2..1287 | 1..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nmnat-RA | 2..1287 | 1..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24945238..24945453 | 1..216 | 100 | -> | Plus |
3R | 24945526..24945932 | 217..623 | 100 | -> | Plus |
3R | 24945984..24946085 | 624..725 | 100 | -> | Plus |
3R | 24946144..24946295 | 726..877 | 100 | -> | Plus |
3R | 24946884..24947154 | 878..1148 | 100 | -> | Plus |
3R | 24947263..24947400 | 1149..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24945238..24945453 | 1..216 | 100 | -> | Plus |
3R | 24945526..24945932 | 217..623 | 100 | -> | Plus |
3R | 24945984..24946085 | 624..725 | 100 | -> | Plus |
3R | 24946144..24946295 | 726..877 | 100 | -> | Plus |
3R | 24946884..24947154 | 878..1148 | 100 | -> | Plus |
3R | 24947263..24947400 | 1149..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24945238..24945453 | 1..216 | 100 | -> | Plus |
3R | 24945526..24945932 | 217..623 | 100 | -> | Plus |
3R | 24945984..24946085 | 624..725 | 100 | -> | Plus |
3R | 24946144..24946295 | 726..877 | 100 | -> | Plus |
3R | 24946884..24947154 | 878..1148 | 100 | -> | Plus |
3R | 24947263..24947400 | 1149..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20770960..20771175 | 1..216 | 100 | -> | Plus |
arm_3R | 20771248..20771654 | 217..623 | 100 | -> | Plus |
arm_3R | 20771706..20771807 | 624..725 | 100 | -> | Plus |
arm_3R | 20771866..20772017 | 726..877 | 100 | -> | Plus |
arm_3R | 20772606..20772876 | 878..1148 | 100 | -> | Plus |
arm_3R | 20772985..20773122 | 1149..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24686357..24686763 | 217..623 | 100 | -> | Plus |
3R | 24686815..24686916 | 624..725 | 100 | -> | Plus |
3R | 24686975..24687126 | 726..877 | 100 | -> | Plus |
3R | 24687715..24687985 | 878..1148 | 100 | -> | Plus |
3R | 24688094..24688231 | 1149..1286 | 100 | Plus | |
3R | 24686069..24686284 | 1..216 | 100 | -> | Plus |
Translation from 20 to 1189
> AT03272.hyp MIVKISWPKNNITSECFRRFGSFKRRSKSKKMSAFIEETKSLLPRIAFIA CGCFSPPTPMHLRMFEIAKDHFEMQGTHRVVGGIISPTHDSYGKKGLASA LDRCAMVKLATQSSNWIRLSDWEVHQNQWMRTQAVLQHHQNYINNHINSG GGGGDDGENTHLPGWLPRGLHDSRDPVHLKLLCGADLLESFAVPGLWAEA DIEDIVANHGLVVITRAGSNPGKFIFDSDILTKYQSNITLITNWVPNEVS STLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNFKSKYITDAVRPNHLLF NHAYTDNNKNANSYSIGDQLEQDMDESDTPSPQLQHTPTSRVFCCGEVPL RGSKVLRSGPGQAVQVITMQADEKEESQAKKQKISQVQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nmnat-PA | 389 | CG13645-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
Nmnat-PC | 358 | CG13645-PC | 1..358 | 32..389 | 1897 | 100 | Plus |
Nmnat-PB | 297 | CG13645-PB | 1..287 | 1..287 | 1526 | 99.7 | Plus |
Translation from 20 to 1189
> AT03272.pep MIVKISWPKNNITSECFRRFGSFKRRSKSKKMSAFIEETKSLLPRIAFIA CGCFSPPTPMHLRMFEIAKDHFEMQGTHRVVGGIISPTHDSYGKKGLASA LDRCAMVKLATQSSNWIRLSDWEVHQNQWMRTQAVLQHHQNYINNHINSG GGGGDDGENTHLPGWLPRGLHDSRDPVHLKLLCGADLLESFAVPGLWAEA DIEDIVANHGLVVITRAGSNPGKFIFDSDILTKYQSNITLITNWVPNEVS STLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNFKSKYITDAVRPNHLLF NHAYTDNNKNANSYSIGDQLEQDMDESDTPSPQLQHTPTSRVFCCGEVPL RGSKVLRSGPGQAVQVITMQADEKEESQAKKQKISQVQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16316-PA | 359 | GF16316-PA | 1..359 | 32..389 | 1664 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11340-PA | 297 | GG11340-PA | 1..287 | 1..287 | 1474 | 95.1 | Plus |
Dere\GG11341-PA | 99 | GG11341-PA | 3..99 | 293..389 | 502 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19439-PA | 346 | GH19439-PA | 1..344 | 42..388 | 1332 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nmnat-PA | 389 | CG13645-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
Nmnat-PC | 358 | CG13645-PC | 1..358 | 32..389 | 1897 | 100 | Plus |
Nmnat-PB | 297 | CG13645-PB | 1..287 | 1..287 | 1526 | 99.7 | Plus |
Nmnat-PD | 266 | CG13645-PD | 1..256 | 32..287 | 1362 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22219-PA | 358 | GI22219-PA | 1..356 | 32..388 | 1365 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24404-PA | 266 | GL24404-PA | 1..256 | 32..287 | 1179 | 84 | Plus |
Dper\GL20613-PA | 65 | GL20613-PA | 1..65 | 324..389 | 250 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30135-PA | 354 | GA30135-PA | 1..354 | 32..389 | 1586 | 82.1 | Plus |
Dpse\GA30135-PB | 266 | GA30135-PB | 1..256 | 32..287 | 1180 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26649-PA | 323 | GM26649-PA | 14..323 | 79..389 | 1528 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21151-PA | 297 | GD21151-PA | 1..287 | 1..287 | 1517 | 97.2 | Plus |
Dsim\GD21152-PA | 99 | GD21152-PA | 3..99 | 293..389 | 514 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24340-PA | 359 | GJ24340-PA | 1..357 | 32..388 | 1357 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12977-PA | 356 | GK12977-PA | 1..356 | 32..389 | 1417 | 74.7 | Plus |