BDGP Sequence Production Resources |
Search the DGRC for AT03311
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 33 |
Well: | 11 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG18223-RC |
Protein status: | AT03311.pep: gold |
Preliminary Size: | 528 |
Sequenced Size: | 1016 |
Gene | Date | Evidence |
---|---|---|
CG18223 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18223 | 2002-02-27 | Blastp of sequenced clone |
CG18223 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18223 | 2008-04-29 | Release 5.5 accounting |
CG18223 | 2008-08-15 | Release 5.9 accounting |
CG18223 | 2008-12-18 | 5.12 accounting |
1016 bp (1016 high quality bases) assembled on 2002-02-27
GenBank Submission: AY084093
> AT03311.complete CAATGTTGCTACTGAAATATGGAGTATCTAGGAAAATCTTCAGTTTCCTA CTGTTCCTCTTGTTGCTTCTGCCGATCCTTGACGCCGGTGATCCGATTGG CAGCCACTTCGTCCGCCGGCGGGCTAAACGCCTTTCCAGTCCCTATTTCG ACAAGGAAAAAACGTTGGTTCTGGCCAAATATGTAGTCTCGATTCGATCC CGAAGACCCCACAAGTTATTTGGCGACAATCACTTCTGCGGTGGCGTGAT CATATCGAGAACCTACATCCTCACCTCCGCCCACTGCGCCATGGAGTAGT AAGCGCAAGATCGTACATCGCAGTCGGGTGTTGGTGGTTGTGGCTGGAAC CACAAATCGTCTGAAATCCCGCAAAGGACTCTCTTTAAACATGGAGGTGA AGAAGATCTTTGTCCCAGACAAGTTCACAGTATTCAATACGAACAACATT GCGCTGATGATGCTGGCCAAAAAACTACCCTTGGACAATCCGCTTGTGGG TGTGATCAATCTGCCTACGGCTGACCCAGAACCGGGTTTGAACTACACGG TGCTGGGCTGGGGAAGGATCTTCAAGGTAAGTTGTGGTAGTTACGAACTA TAAGTAGGTTTATTATTAACTATAGGGCGGTCCCCTGGCCTCGGACATCC TGCACATTGACGTGGAGCTATTGCCCCGGGATATCTGTGAGAAGAAAGTC CACATCTTCAAGGAGGAGATGATGTGCGCCGGAAATCTGAACAACACCAT GGACGAGAATCCCTGTGCCGGTGACACCGGAAGCCCACTGATTTTCAACG AAACAGTCTTTGGTGTGGTTAGCTACCGAGTAGGCTGTGGATCTAAAACT TTGCCCTCCATTTATACCAACGTCTACATGCATATGGACTGGATTAATGG CATTATGAACAATAATGAAGCGAACCGATTGTGTTACTCTCCCAACTATC TATTCACCACCATTGGTATAATCATTGGAAATAAAATTCTGAAAAGTTAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nc_13403.a | 998 | nc_13403.a | 1..998 | 1..998 | 4990 | 100 | Plus |
CG18223-RB | 1011 | CG18223-RB | 18..1011 | 1..998 | 4905 | 99.5 | Plus |
CG18223-RA | 1014 | CG18223-RA | 44..616 | 1..577 | 2800 | 99.3 | Plus |
CG18223-RA | 1014 | CG18223-RA | 614..988 | 624..998 | 1875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 2102..2171 | 109..44 | 124 | 68.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18908878..18909576 | 300..998 | 99 | <- | Minus |
chr3L | 18909632..18909930 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..597 | 3..603 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..597 | 3..603 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RA | 577..943 | 632..998 | 100 | Plus | |
CG18223-RA | 1..576 | 3..582 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..597 | 3..603 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RA | 577..943 | 632..998 | 100 | Plus | |
CG18223-RA | 1..576 | 3..582 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..994 | 1..998 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..994 | 1..998 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RC | 18..599 | 1..582 | 99 | == | Plus |
CG18223-RC | 600..966 | 632..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RB | 1..994 | 1..998 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18223-RC | 18..599 | 1..582 | 99 | == | Plus |
CG18223-RC | 600..966 | 632..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18919250..18919948 | 300..998 | 100 | <- | Minus |
3L | 18920004..18920302 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18919250..18919948 | 300..998 | 100 | <- | Minus |
3L | 18920004..18920302 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18919250..18919948 | 300..998 | 100 | <- | Minus |
3L | 18920004..18920302 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18912350..18913048 | 300..998 | 100 | <- | Minus |
arm_3L | 18913104..18913402 | 1..299 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18912350..18913048 | 300..998 | 100 | <- | Minus |
3L | 18913104..18913402 | 1..299 | 100 | Minus |
Translation from 2 to 298
> AT03311.pep MLLLKYGVSRKIFSFLLFLLLLLPILDAGDPIGSHFVRRRAKRLSSPYFD KEKTLVLAKYVVSIRSRRPHKLFGDNHFCGGVIISRTYILTSAHCAME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10797-PA | 335 | GF10797-PA | 25..92 | 31..98 | 234 | 60.3 | Plus |
Dana\GF10796-PA | 312 | GF10796-PA | 9..93 | 15..97 | 172 | 47.7 | Plus |
Dana\GF24742-PA | 310 | GF24742-PA | 63..104 | 57..98 | 137 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13441-PA | 322 | GG13441-PA | 1..98 | 1..98 | 426 | 91.8 | Plus |
Dere\GG22790-PA | 270 | GG22790-PA | 1..49 | 49..97 | 178 | 63.3 | Plus |
Dere\GG14382-PA | 304 | GG14382-PA | 35..89 | 40..95 | 162 | 55.4 | Plus |
Dere\GG12685-PA | 308 | GG12685-PA | 52..90 | 57..95 | 145 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16532-PA | 301 | GH16532-PA | 28..87 | 39..98 | 198 | 60 | Plus |
Dgri\GH19781-PA | 275 | GH19781-PA | 11..66 | 42..98 | 180 | 61.4 | Plus |
Dgri\GH24443-PA | 308 | GH24443-PA | 60..98 | 57..95 | 151 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18223-PC | 98 | CG18223-PC | 1..98 | 1..98 | 501 | 100 | Plus |
CG18223-PA | 322 | CG18223-PA | 1..98 | 1..98 | 498 | 99 | Plus |
CG13527-PA | 290 | CG13527-PA | 7..80 | 15..97 | 205 | 50.6 | Plus |
CG13527-PB | 292 | CG13527-PB | 7..80 | 15..97 | 205 | 50.6 | Plus |
CG4477-PB | 315 | CG4477-PB | 7..88 | 15..95 | 169 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20322-PA | 292 | GI20322-PA | 25..85 | 38..98 | 204 | 55.7 | Plus |
Dmoj\GI12048-PA | 308 | GI12048-PA | 3..96 | 4..97 | 187 | 44.7 | Plus |
Dmoj\GI20323-PA | 308 | GI20323-PA | 32..91 | 37..97 | 176 | 55.7 | Plus |
Dmoj\GI16031-PA | 363 | GI16031-PA | 113..153 | 57..97 | 161 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22039-PA | 295 | GL22039-PA | 3..85 | 9..98 | 210 | 48.9 | Plus |
Dper\GL11375-PA | 277 | GL11375-PA | 12..71 | 38..98 | 200 | 60.7 | Plus |
Dper\GL14363-PA | 313 | GL14363-PA | 60..98 | 57..95 | 148 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14844-PA | 295 | GA14844-PA | 3..85 | 9..98 | 209 | 48.9 | Plus |
Dpse\GA24700-PA | 277 | GA24700-PA | 11..71 | 37..98 | 201 | 59.7 | Plus |
Dpse\GA22993-PA | 313 | GA22993-PA | 60..98 | 57..95 | 148 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14910-PA | 322 | GM14910-PA | 1..98 | 1..98 | 411 | 95.9 | Plus |
Dsec\GM15948-PA | 281 | GM15948-PA | 9..66 | 40..97 | 211 | 63.8 | Plus |
Dsec\GM25124-PA | 315 | GM25124-PA | 1..91 | 8..98 | 170 | 42.4 | Plus |
Dsec\GM18957-PA | 239 | GM18957-PA | 51..95 | 51..95 | 135 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12317-PA | 244 | GD12317-PA | 1..98 | 1..98 | 493 | 96.9 | Plus |
Dsim\GD11702-PA | 281 | GD11702-PA | 9..66 | 40..97 | 210 | 63.8 | Plus |
Dsim\GD14161-PA | 316 | GD14161-PA | 9..92 | 16..98 | 169 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22047-PA | 292 | GJ22047-PA | 27..86 | 39..98 | 211 | 63.3 | Plus |
Dvir\GJ13318-PA | 307 | GJ13318-PA | 21..88 | 33..98 | 195 | 57.4 | Plus |
Dvir\GJ22048-PA | 299 | GJ22048-PA | 31..87 | 40..97 | 170 | 53.4 | Plus |
Dvir\GJ15542-PA | 304 | GJ15542-PA | 54..92 | 57..95 | 141 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10389-PA | 307 | GK10389-PA | 6..93 | 13..98 | 249 | 57.3 | Plus |
Dwil\GK21453-PA | 299 | GK21453-PA | 30..90 | 38..98 | 231 | 65.6 | Plus |
Dwil\GK25304-PA | 337 | GK25304-PA | 35..118 | 31..98 | 150 | 40.5 | Plus |
Dwil\GK11985-PA | 283 | GK11985-PA | 6..72 | 38..95 | 137 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22539-PA | 322 | GE22539-PA | 1..98 | 1..98 | 421 | 91.8 | Plus |
Dyak\GE14020-PA | 285 | GE14020-PA | 9..66 | 40..97 | 201 | 62.1 | Plus |
Dyak\GE20812-PA | 318 | GE20812-PA | 34..89 | 39..95 | 165 | 54.4 | Plus |
Translation from 2 to 298
> AT03311.hyp MLLLKYGVSRKIFSFLLFLLLLLPILDAGDPIGSHFVRRRAKRLSSPYFD KEKTLVLAKYVVSIRSRRPHKLFGDNHFCGGVIISRTYILTSAHCAME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18223-PC | 98 | CG18223-PC | 1..98 | 1..98 | 501 | 100 | Plus |
CG18223-PA | 322 | CG18223-PA | 1..98 | 1..98 | 498 | 99 | Plus |
CG13527-PA | 290 | CG13527-PA | 7..80 | 15..97 | 205 | 50.6 | Plus |
CG13527-PB | 292 | CG13527-PB | 7..80 | 15..97 | 205 | 50.6 | Plus |
CG4477-PB | 315 | CG4477-PB | 7..88 | 15..95 | 169 | 44.6 | Plus |