BDGP Sequence Production Resources |
Search the DGRC for AT03366
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 33 |
Well: | 66 |
Vector: | pOTB7 |
Associated Gene/Transcript | ps-RJ |
Protein status: | AT03366.pep: gold |
Preliminary Size: | 290 |
Sequenced Size: | 1799 |
Gene | Date | Evidence |
---|---|---|
CG16776 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8144 | 2002-02-26 | Blastp of sequenced clone |
ps | 2008-04-29 | Release 5.5 accounting |
ps | 2008-08-15 | Release 5.9 accounting |
ps | 2008-12-18 | 5.12 accounting |
1799 bp (1799 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089247
> AT03366.complete CGTTCATCACAGCAGGCTCTCTCAAATACGTCAAGTGTTAAAATCCCAAA AAAAAAATATCTACAGAAAATAAAACAAAATTCCAGTGTTGTCTTAATGT TGCATCAAAAATTTTAAGTTTTATCTCGTGAATTGGAATGCGGAAGCTTT GTTCGAGTGAGTCAGTTTGTTCTGGAATTGAGGTTGAAATTGAAAATAAT AACAATAATCATATTCATCATGGCGAGACAACGTATCACATGAAAATACT GGTGCCCGCGGTGGCCTCCGGGGCCATCATTGGCAAAGGTGGCGAGACGA TCGCCTCCCTGCAGAAGGACACGGGTGCTAGGGTCAAGATGTCCAAGTCG CACGACTTCTACCCAGGCACCACCGAACGCGTGTGCCTGATCACCGGCTC CACGGAGGCTATCATGGTCGTGATGGAGTTCATCATGGACAAGATCCGCG AGAAGCCCGACCTGACCAACAAGATCGTCGATACCGACTCAAAACAGACA CAGGAGCGCGACAAGCAGGTCAAGATCCTGGTGCCCAACTCGACCGCCGG CATGATCATTGGCAAGGGCGGTGCCTTCATTAAACAGATCAAGGAGGAGA GCGGCTCCTATGTCCAGATCTCGCAGAAGCCCACGGATGTGTCGTTGCAG GAGCGCTGCATCACCATCATAGGCGACAAGGAGAACAATAAGAACGCCTG CAAGATGATCCTCTCGAAGATCGTCGAAGATCCCCAGTCGGGCACCTGCC TGAACGTATCCTACGCGGACGTCAGCGGCCCGGTGGCCAACTTTAATCCG ACCGGCTCCCCGTACGCCACCAATCAGAATGCCATCAACTCGAGCACCGC TTCGTTGAACTCCACGTTGGGCACCACGATCGGCGGTGCAAACTCGGCGG CCAGCCTGCTAGTCAACGGCACCGGCATCAATTTGTCCATCAATCTGGGC TCACCCAATCCGGCGCCCAATCTAGCGGTTGCCACACAGCTGCTCGAGCA TATTAAGGTTGCCATGCGCGGCTCTGGCTATTCGGAGACCGTAACGAACG AAGTTGTCGCCGCTCTGAGCGTGCTGGCCAAGTACGGCGTCCTTGGAATG GGCGTGGGTGTGTCGCACACCAACGGCGCCCACTCAACGCTGGGCAACTT CCTGGGCGTAACGACGCTGGACCAGCAGACAGCCGCTGCCGCATCTGCGG CCACCGCCAGCAATGTGTTCGGTGCCGTTGGCCAGGTAAATCTGGAGCAA TATGCCGCAGCGGTGGCCTCTGCAGCTGCCGCCAGCCGGCCGACGCAGTC GCAACTGGACGCTGCCGCAGTGCAATTCGATCCATTCCGCCATTTGGGCT CGGCAACGGCGCCGGCCGCCACGCCCGTCTCACTGAACAACAATAGCTTT GGATTGACGGCGACCACGGGAACGGCGACCACGGCGCAGCTGGGCGGTCT AAGCAAGAGTCCCACTCCCGGTGACCTTAGCTCCAAGGACTCGAAAAACG TCGAGGTGCCGGAAGTGATTATCGGCGCTATCCTAGGTCCGAGCGGTCGT AGTTTAGTTGAAATTCAACATGTTTCTGGCGCAAATGTGCAAATTTCCAA AAAGGGCATATTCGCACCTGGCACTAGAAATCGCATTGTAACCATAACTG GTCAGCCGAGTGCCATTGCCAAAGCGCAATATCTAATTGAACAGAAAATC AACGAGGAGGAGACAAAGAGGGCGCGACAAATTCCATTAACCACTGTTGT GAATTAAAATAAAAAAACAAAAAGTACCATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5271106..5271752 | 364..1010 | 3235 | 100 | Plus |
chr3R | 27901430 | chr3R | 5271821..5272353 | 1006..1538 | 2665 | 100 | Plus |
chr3R | 27901430 | chr3R | 5273481..5273727 | 1535..1780 | 1185 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 5260118..5260279 | 1..162 | 795 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 5270897..5271042 | 222..367 | 730 | 100 | Plus |
chr3R | 27901430 | chr3R | 5269865..5269931 | 157..223 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9445252..9445898 | 364..1010 | 3235 | 100 | Plus |
3R | 32079331 | 3R | 9445967..9446499 | 1006..1538 | 2665 | 100 | Plus |
3R | 32079331 | 3R | 9447627..9447875 | 1535..1782 | 1195 | 99.6 | Plus |
3R | 32079331 | 3R | 9434266..9434428 | 1..162 | 750 | 98.8 | Plus |
3R | 32079331 | 3R | 9445043..9445188 | 222..367 | 730 | 100 | Plus |
3R | 32079331 | 3R | 9444011..9444077 | 157..223 | 335 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9186083..9186729 | 364..1010 | 3235 | 100 | Plus |
3R | 31820162 | 3R | 9186798..9187330 | 1006..1538 | 2665 | 100 | Plus |
3R | 31820162 | 3R | 9188458..9188706 | 1535..1782 | 1205 | 99.5 | Plus |
3R | 31820162 | 3R | 9175097..9175259 | 1..162 | 760 | 98.7 | Plus |
3R | 31820162 | 3R | 9185874..9186019 | 222..367 | 730 | 100 | Plus |
3R | 31820162 | 3R | 9184842..9184908 | 157..223 | 335 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5273483..5273727 | 1537..1780 | 99 | Plus | |
chr3R | 5260118..5260273 | 1..156 | 100 | -> | Plus |
chr3R | 5269865..5269930 | 157..222 | 100 | -> | Plus |
chr3R | 5270898..5271041 | 223..366 | 100 | -> | Plus |
chr3R | 5271109..5271749 | 367..1007 | 100 | -> | Plus |
chr3R | 5271823..5272351 | 1008..1536 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1620 | 138..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1620 | 138..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1620 | 138..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1620 | 138..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1620 | 138..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1782 | 1..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1782 | 1..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1782 | 1..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1782 | 1..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ps-RJ | 1..1782 | 1..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9434266..9434422 | 1..156 | 99 | -> | Plus |
3R | 9444011..9444076 | 157..222 | 100 | -> | Plus |
3R | 9445044..9445187 | 223..366 | 100 | -> | Plus |
3R | 9445255..9445895 | 367..1007 | 100 | -> | Plus |
3R | 9445969..9446497 | 1008..1536 | 100 | -> | Plus |
3R | 9447629..9447873 | 1537..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9434266..9434422 | 1..156 | 99 | -> | Plus |
3R | 9444011..9444076 | 157..222 | 100 | -> | Plus |
3R | 9445044..9445187 | 223..366 | 100 | -> | Plus |
3R | 9445255..9445895 | 367..1007 | 100 | -> | Plus |
3R | 9445969..9446497 | 1008..1536 | 100 | -> | Plus |
3R | 9447629..9447873 | 1537..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9434266..9434422 | 1..156 | 99 | -> | Plus |
3R | 9444011..9444076 | 157..222 | 100 | -> | Plus |
3R | 9445044..9445187 | 223..366 | 100 | -> | Plus |
3R | 9445255..9445895 | 367..1007 | 100 | -> | Plus |
3R | 9445969..9446497 | 1008..1536 | 100 | -> | Plus |
3R | 9447629..9447873 | 1537..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5259988..5260144 | 1..156 | 99 | -> | Plus |
arm_3R | 5269733..5269798 | 157..222 | 100 | -> | Plus |
arm_3R | 5270766..5270909 | 223..366 | 100 | -> | Plus |
arm_3R | 5270977..5271617 | 367..1007 | 100 | -> | Plus |
arm_3R | 5271691..5272219 | 1008..1536 | 100 | -> | Plus |
arm_3R | 5273351..5273595 | 1537..1780 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9186086..9186726 | 367..1007 | 100 | -> | Plus |
3R | 9186800..9187328 | 1008..1536 | 100 | -> | Plus |
3R | 9188460..9188704 | 1537..1780 | 99 | Plus | |
3R | 9175097..9175253 | 1..156 | 99 | -> | Plus |
3R | 9184842..9184907 | 157..222 | 100 | -> | Plus |
3R | 9185875..9186018 | 223..366 | 100 | -> | Plus |
Translation from 137 to 1756
> AT03366.pep MRKLCSSESVCSGIEVEIENNNNNHIHHGETTYHMKILVPAVASGAIIGK GGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIM DKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQ IKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQ SGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG ANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSE TVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAA AASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPF RHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSK DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRI VTITGQPSAIAKAQYLIEQKINEEETKRARQIPLTTVVN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17214-PA | 532 | GF17214-PA | 37..510 | 4..474 | 2074 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16798-PA | 572 | GG16798-PA | 37..572 | 4..539 | 2736 | 97.4 | Plus |
Dere\GG16232-PA | 364 | GG16232-PA | 1..197 | 18..216 | 168 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18435-PA | 569 | GH18435-PA | 37..565 | 4..529 | 2237 | 87.1 | Plus |
Dgri\GH14429-PA | 362 | GH14429-PA | 23..197 | 32..216 | 168 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ps-PJ | 539 | CG16765-PJ | 1..539 | 1..539 | 2695 | 100 | Plus |
ps-PR | 780 | CG42670-PR | 246..780 | 5..539 | 2666 | 99.6 | Plus |
ps-PT | 616 | CG42670-PT | 82..616 | 5..539 | 2666 | 99.6 | Plus |
ps-PO | 572 | CG16765-PO | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PN | 572 | CG16765-PN | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PH | 572 | CG16765-PH | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PG | 572 | CG16765-PG | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PF | 572 | CG8144-PA | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PD | 583 | CG8144-PD | 52..583 | 8..539 | 2659 | 100 | Plus |
ps-PM | 550 | CG16765-PM | 28..550 | 17..539 | 2556 | 98.3 | Plus |
ps-PP | 550 | CG16765-PP | 28..550 | 17..539 | 2556 | 98.3 | Plus |
ps-PK | 550 | CG16765-PK | 28..550 | 17..539 | 2556 | 98.3 | Plus |
ps-PS | 594 | CG42670-PS | 60..594 | 6..539 | 2546 | 96.4 | Plus |
ps-PL | 758 | CG16765-PL | 224..758 | 6..539 | 2546 | 96.4 | Plus |
ps-PQ | 517 | CG42670-PQ | 1..517 | 1..539 | 2539 | 95.9 | Plus |
ps-PC | 561 | CG8144-PC | 52..561 | 30..539 | 2536 | 100 | Plus |
ps-PB | 475 | CG8144-PB | 1..467 | 1..467 | 2341 | 100 | Plus |
ps-PI | 519 | CG16765-PI | 52..511 | 8..467 | 2305 | 100 | Plus |
mub-PE | 557 | CG7437-PE | 1..431 | 18..444 | 224 | 24.8 | Plus |
mub-PF | 557 | CG7437-PF | 1..431 | 18..444 | 224 | 24.8 | Plus |
mub-PI | 539 | CG7437-PI | 1..413 | 18..444 | 217 | 24.5 | Plus |
mub-PD | 539 | CG7437-PD | 1..413 | 18..444 | 215 | 24.2 | Plus |
mub-PA | 386 | CG7437-PA | 1..304 | 18..310 | 203 | 26 | Plus |
mub-PL | 368 | CG7437-PL | 1..286 | 18..310 | 196 | 25.6 | Plus |
mub-PC | 364 | CG7437-PC | 1..282 | 18..310 | 192 | 25.4 | Plus |
mub-PG | 359 | CG7437-PG | 1..277 | 18..310 | 190 | 25.7 | Plus |
mub-PM | 359 | CG7437-PM | 1..277 | 18..310 | 190 | 25.7 | Plus |
mub-PK | 573 | CG7437-PK | 1..447 | 18..444 | 188 | 22.5 | Plus |
mub-PN | 415 | CG7437-PN | 1..197 | 18..216 | 178 | 25.5 | Plus |
mub-PH | 433 | CG7437-PH | 1..197 | 18..216 | 178 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24011-PA | 574 | GI24011-PA | 37..574 | 4..539 | 2323 | 87.6 | Plus |
Dmoj\GI13561-PA | 362 | GI13561-PA | 23..197 | 32..216 | 166 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13824-PA | 554 | GL13824-PA | 47..554 | 8..539 | 2302 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30025-PA | 570 | GA30025-PA | 37..570 | 4..539 | 2449 | 93.5 | Plus |
Dpse\GA30025-PE | 548 | GA30025-PE | 28..548 | 17..539 | 2441 | 92.2 | Plus |
Dpse\GA30025-PD | 576 | GA30025-PD | 47..576 | 8..539 | 2441 | 94 | Plus |
Dpse\GA30025-PC | 554 | GA30025-PC | 47..554 | 30..539 | 2420 | 93.7 | Plus |
Dpse\GA30025-PF | 800 | GA30025-PF | 235..800 | 4..539 | 2412 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23807-PA | 572 | GM23807-PA | 37..572 | 4..539 | 2722 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18616-PA | 330 | GD18616-PA | 56..257 | 8..209 | 1072 | 97.5 | Plus |
Dsim\GD18616-PA | 330 | GD18616-PA | 241..330 | 452..539 | 379 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23641-PA | 574 | GJ23641-PA | 37..574 | 4..539 | 2366 | 88.6 | Plus |
Dvir\GJ11921-PA | 589 | GJ11921-PA | 23..197 | 32..216 | 170 | 26.3 | Plus |
Translation from 137 to 1756
> AT03366.hyp MRKLCSSESVCSGIEVEIENNNNNHIHHGETTYHMKILVPAVASGAIIGK GGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIM DKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQ IKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQ SGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG ANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSE TVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAA AASAATASNVFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPF RHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDLSSK DSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRI VTITGQPSAIAKAQYLIEQKINEEETKRARQIPLTTVVN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ps-PJ | 539 | CG16765-PJ | 1..539 | 1..539 | 2695 | 100 | Plus |
ps-PR | 780 | CG42670-PR | 246..780 | 5..539 | 2666 | 99.6 | Plus |
ps-PT | 616 | CG42670-PT | 82..616 | 5..539 | 2666 | 99.6 | Plus |
ps-PO | 572 | CG16765-PO | 39..572 | 6..539 | 2663 | 99.8 | Plus |
ps-PN | 572 | CG16765-PN | 39..572 | 6..539 | 2663 | 99.8 | Plus |