BDGP Sequence Production Resources |
Search the DGRC for AT03386
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 33 |
Well: | 86 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG7841-RA |
Protein status: | AT03386.pep: gold |
Preliminary Size: | 599 |
Sequenced Size: | 1421 |
Gene | Date | Evidence |
---|---|---|
CG7841 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7841 | 2002-02-22 | Blastp of sequenced clone |
CG7841 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7841 | 2008-04-29 | Release 5.5 accounting |
CG7841 | 2008-08-15 | Release 5.9 accounting |
CG7841 | 2008-12-18 | 5.12 accounting |
1421 bp (1421 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084095
> AT03386.complete CCTCGTGCCGAACATACGGCTCTTTGCGGGTGTCTCTCTTAACATTTCGT TATGCGATTTGAATGGGGCAGTTGCATTGGAGCCTCGTCCGCCGAACACA GAACATTACAAACGCGTTTCCAGGAGTAATTGTCGGTGATTTTAATCGAA AACAATTGATACGAGCGCGGTGCGGCAGCCATCAAAATCAAAGAGTGCTA AATCGGAATCACTGCCCTAAGTGAAGTGTATTGTGTAACCTTTTGAGACG ATGACAATAGGCCAAAAGGAGGCGGCGTGGGGCAGGCTGGGCTGCCAATG ATCATATGATTGCCTAGAGCGGAAAAATACTCAAAATCATAGCAGTCCGC TAGGCATTTCGTTGCCAGAAACGAAAACAACAATACGTAAATCGAAAGGA CAAGGTATATTTTCAGCCGGTACTCCCCATCTCCCCACCACCATGTACAC AATCAACAAGGGACCTAGCAAAATTGTTGCTAAAACGCGTCGCGGCCTGG CACCAAATTTTGAAAAATTCGAAAGCATCAAGGAGAGCGGCCGCAAGAAC GCTAGTTTCGATCTGAACAGTCCCGAGGAGCACAAAAACATACCGCGTCC GGTGTTTCAACAGAGCTTCGCCACCAAGCGGATAACGCCAACCAAACTGA TCGAGGATGAGGTGATAACGCCGCAACATGAGGAAATAATACGTTACATA AATGACTCCTGGAACATGCTGGTGGCGCAGAATCCCTACGACTCGAGCTC ATCCGCCAAGCCTGTTGAGAAACCTGTAGCGGATGCCAACAACAACAGCG CCGCCAGTCCAGTGGAAAGCATAATGGCCAACAGCCCAGTGCCCGCTGCC TCAACAGCCACTGTCTGGGTGGAACCACCGAGTCCAGCGCTACAGGACTT CAAGCCCTTCGACCTGGAGTCGTGGTGGGGACGTCGCCTCTTCCAGAACA TAACCAAAAGCCTGTAGGACCGATCGCATGGGATCGAATGAGTGGCAGAG CCTGATCTTTGTCAATTCCTAGATAGTCAGTGCTTCCTTCTGTGCATGTA CGTTCGACTGGACATGGGCAAAATCACACTAGATGATAGTGGGCGAAACG AGACGTGACGAGAGACTTGCTTAGTTTTCGGCTAGCGACTAAGTAAATAT CACTTTGGATGTTAGTGGTTGGGAGGCCACCGTGGTGGCAAATCTTGGCA TAGGTTCATCTCGCATATAAGTGTGTATATGAAGTAAATTGAGAGTCGTC GCCGTTGGCCAATGTAAATAATACGATTTCTGATTTACAATTAAGAATGT GAAACGTGTCATCTGGATGGCTTGCCATTTTTTTTTTTAATGTCAACAAC ACTCATGTGAATTGTATAAAGTATAAGGTTCAAACTAACATCAATTTAAT TGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15495391..15496100 | 1403..708 | 3200 | 97.3 | Minus |
chr3L | 24539361 | chr3L | 15497750..15498234 | 495..11 | 2395 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 15496179..15496297 | 707..589 | 595 | 100 | Minus |
chr3L | 24539361 | chr3L | 15497425..15497519 | 588..494 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15505437..15506148 | 1405..708 | 3210 | 97.3 | Minus |
3L | 28110227 | 3L | 15507798..15508282 | 495..11 | 2410 | 99.8 | Minus |
3L | 28110227 | 3L | 15506227..15506345 | 707..589 | 595 | 100 | Minus |
3L | 28110227 | 3L | 15507473..15507567 | 588..494 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15498655..15499248 | 1301..708 | 2925 | 99.4 | Minus |
3L | 28103327 | 3L | 15500898..15501382 | 495..11 | 2410 | 99.7 | Minus |
3L | 28103327 | 3L | 15499327..15499445 | 707..589 | 595 | 100 | Minus |
3L | 28103327 | 3L | 15498537..15498640 | 1405..1301 | 485 | 99 | Minus |
3L | 28103327 | 3L | 15500573..15500667 | 588..494 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 6335..6393 | 783..842 | 117 | 68.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15497751..15498240 | 4..494 | 98 | Minus | |
chr3L | 15495391..15495491 | 1301..1403 | 98 | <- | Minus |
chr3L | 15495508..15496100 | 708..1300 | 99 | <- | Minus |
chr3L | 15496179..15496297 | 589..707 | 100 | <- | Minus |
chr3L | 15497425..15497518 | 495..588 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..525 | 443..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..525 | 443..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..525 | 443..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..525 | 443..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..525 | 443..967 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 2..1296 | 7..1300 | 99 | -> | Plus |
CG7841-RA | 1313..1413 | 1301..1403 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 2..1296 | 7..1300 | 99 | -> | Plus |
CG7841-RA | 1313..1413 | 1301..1403 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..1260 | 41..1300 | 99 | -> | Plus |
CG7841-RA | 1277..1377 | 1301..1403 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 2..1296 | 7..1300 | 99 | -> | Plus |
CG7841-RA | 1313..1413 | 1301..1403 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7841-RA | 1..1260 | 41..1300 | 99 | -> | Plus |
CG7841-RA | 1277..1377 | 1301..1403 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15505439..15505539 | 1301..1403 | 98 | <- | Minus |
3L | 15505556..15506148 | 708..1300 | 99 | <- | Minus |
3L | 15506227..15506345 | 589..707 | 100 | <- | Minus |
3L | 15507473..15507566 | 495..588 | 100 | <- | Minus |
3L | 15507799..15508288 | 4..494 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15505439..15505539 | 1301..1403 | 98 | <- | Minus |
3L | 15505556..15506148 | 708..1300 | 99 | <- | Minus |
3L | 15506227..15506345 | 589..707 | 100 | <- | Minus |
3L | 15507473..15507566 | 495..588 | 100 | <- | Minus |
3L | 15507799..15508288 | 4..494 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15505439..15505539 | 1301..1403 | 98 | <- | Minus |
3L | 15505556..15506148 | 708..1300 | 99 | <- | Minus |
3L | 15506227..15506345 | 589..707 | 100 | <- | Minus |
3L | 15507473..15507566 | 495..588 | 100 | <- | Minus |
3L | 15507799..15508288 | 4..494 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15498539..15498639 | 1301..1403 | 98 | <- | Minus |
arm_3L | 15498656..15499248 | 708..1300 | 99 | <- | Minus |
arm_3L | 15499327..15499445 | 589..707 | 100 | <- | Minus |
arm_3L | 15500573..15500666 | 495..588 | 100 | <- | Minus |
arm_3L | 15500899..15501388 | 4..494 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15498656..15499248 | 708..1300 | 99 | <- | Minus |
3L | 15499327..15499445 | 589..707 | 100 | <- | Minus |
3L | 15500573..15500666 | 495..588 | 100 | <- | Minus |
3L | 15500899..15501388 | 4..494 | 99 | Minus | |
3L | 15498539..15498639 | 1301..1403 | 98 | <- | Minus |
Translation from 442 to 966
> AT03386.pep MYTINKGPSKIVAKTRRGLAPNFEKFESIKESGRKNASFDLNSPEEHKNI PRPVFQQSFATKRITPTKLIEDEVITPQHEEIIRYINDSWNMLVAQNPYD SSSSAKPVEKPVADANNNSAASPVESIMANSPVPAASTATVWVEPPSPAL QDFKPFDLESWWGRRLFQNITKSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10731-PA | 175 | GF10731-PA | 1..175 | 1..174 | 834 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13548-PA | 174 | GG13548-PA | 1..174 | 1..174 | 884 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17022-PA | 181 | GH17022-PA | 1..181 | 1..174 | 696 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7841-PB | 174 | CG7841-PB | 1..174 | 1..174 | 908 | 100 | Plus |
CG7841-PA | 174 | CG7841-PA | 1..174 | 1..174 | 908 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12227-PA | 180 | GI12227-PA | 1..180 | 1..174 | 704 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25627-PA | 174 | GL25627-PA | 1..174 | 1..174 | 736 | 86.3 | Plus |
Dper\GL23217-PA | 161 | GL23217-PA | 1..161 | 1..174 | 490 | 55.2 | Plus |
Dper\GL20951-PA | 163 | GL20951-PA | 1..163 | 1..174 | 336 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20624-PA | 174 | GA20624-PA | 1..174 | 1..174 | 736 | 86.3 | Plus |
Dpse\GA27194-PA | 161 | GA27194-PA | 1..161 | 1..174 | 471 | 53.4 | Plus |
Dpse\GA28641-PA | 163 | GA28641-PA | 1..163 | 1..174 | 362 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24490-PA | 174 | GM24490-PA | 1..174 | 1..174 | 895 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12561-PA | 174 | GD12561-PA | 1..174 | 1..174 | 895 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11457-PA | 180 | GJ11457-PA | 1..180 | 1..174 | 690 | 79.2 | Plus |
Translation from 442 to 966
> AT03386.hyp MYTINKGPSKIVAKTRRGLAPNFEKFESIKESGRKNASFDLNSPEEHKNI PRPVFQQSFATKRITPTKLIEDEVITPQHEEIIRYINDSWNMLVAQNPYD SSSSAKPVEKPVADANNNSAASPVESIMANSPVPAASTATVWVEPPSPAL QDFKPFDLESWWGRRLFQNITKSL*