Clone AT03545 Report

Search the DGRC for AT03545

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:35
Well:45
Vector:pOTB7
Associated Gene/TranscriptCG17083-RA
Protein status:AT03545.pep: gold
Preliminary Size:1770
Sequenced Size:1977

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17083 2002-01-01 Sim4 clustering to Release 2
CG17083 2003-01-01 Sim4 clustering to Release 3
CG17083 2003-07-26 Blastp of sequenced clone
CG17083 2008-04-29 Release 5.5 accounting
CG17083 2008-08-15 Release 5.9 accounting
CG17083 2008-12-18 5.12 accounting

Clone Sequence Records

AT03545.complete Sequence

1977 bp (1977 high quality bases) assembled on 2003-07-26

GenBank Submission: BT010127

> AT03545.complete
GTTTAGAGTTTAGTGATTAGACAAACATATTGCAACTTTTTAAACACTAC
GAAAGCAAGCATACAAACACGAATATTCTGCTTGATTTTCGTTACTAAAG
TCTCCACTTTTATAAGGTGGAACTCCGTTTTGGGTTAGCTACTGAAGAAA
GCATTCACCATGGAGGAAATCAAGAAGTTTGACAAGCTTGCCTTCCTGGA
AAGCTACCTGCTGAAGCACAAGGAATTGGGCAAGCGACAGCGCGAGTACA
AGAAGATCCTGTCCAGCAAACTCAAGACCCGCAAGGAGACCATCATCGAG
GCCAGCTTTGAGACGGCCATCGATCAGCTGGAGGAGGAGAAAAACGATCT
GCGTGCCCAGATCTGGGTGGCCAGTGGTACGACCCACAAAAAACAGAACA
ATCGCTGGCTGGAGCTGATTCGCTGCCATGTCGAGTGCCAGGAGAATCTG
TCGCAGGACATTAACTCTCTGAAGACATCGATTTCCAACATGGAGAAGGA
GATAAGTCGCATGTCCAAGCAAATATACAACCTGAATCGTTTAACCATTC
CGGATCAGCAACATCAGGCCTATGTAATGCGAGCACGGAAAAGGATGACC
ATTTTGGAGAATTCCCTGGAGGTGGGAGTGCGTCAGGAGTGCGGTTTTAC
GGCAGCCAATGCGGATCTGCGAGAGCAGCTTATCCGCATCCTGAATCATC
GCACCTTCTTCAATGATTCATACACCAAAATGGTGCAGAAGCTGAACAGC
GAGAAAAAGTATCTCATAGATCTGATCGAATACGCTCTGAATACCTTCGA
TGGCTGCATTGAGGTGTACGAGAAAATTGATTTGTTGGCCAAAAGGGAGG
CCAAGGAGCGCGATATGAGACGTGTGGAGATGCAGGGTATTATGCGAAAG
GTGGCAGCCGATGGTGATAACACCGCCTTCCTGAATTGCAAGTCTAAGCC
TCGAGAGCTGGCCGATTTGCAGCCCAAGGAGTACAAGCGAAGGGATGAAT
TCCGACGGGTGCACAACAAAAAGATCAATCTCTACAACTCGGTGCTGCAG
AAGATTCTCCAGTATACGGAATCTAGCAATATGGACGAGGTGATCGATAA
GTTTCAGCAGCAGGAGAGTCTCTATTACTCGTTCTTCAACTATGCCAACG
AAATGAGCTACCACATAACTATGCTGAATAATTCGGTGAATCGCCTGTTT
GAGGATATAGTTAACCTGAAAAAGGATAACTCCAACACGCTGCAGGACCA
ACTGGATCAGATTTCCAGTCTGGAGAACAAGGTGCGTAACAAACAGGAAT
CCAACATGGAACTGCACAAGGCGCGGGAAAACAACGATGCACGTTTGGAG
AATCTTCTACAGGGCGTGGAGACGGTCTGCGAGATGTGTTCCATAGATGC
CAGTCCGCTGACCAAACTCCTTGGTGACCACACCCACGTCAATCTGGTTA
ATGTCAATCGATTCTTGAAGCTGCTCGAGACAAGGGTCCAGGAGCTGACG
GCTAGTGTTTATGTGATGGAGCGCCAAGAGGAGGGCCGCTTCGACTATGT
GGTCAAGCAGATCGAGAAGATCTGCGAGCTGCCCACCGATCTCAATGACA
TTGTGCTCACCCAGCAGTGTCCCGAGTGCGCCGAGGGTGAAGCCTTCAAC
ATGGATGAGGGCGGCGATGGTGTCCTTGTCCACACGGTCGCCGAGGCCAA
GAAGAAGCTGTACGAGAAGGTTACGCAGCCGGAGATGCAGTACCGCCTGC
ACAGCATCAGCCAGTGTCGTCTGCCGCGATCCCGTCTCCTGGCCGCCAAG
CGCAACATGTAGTTCTGGAATATATGATGCAAATCACATTCCCATTAGTT
TCGGTTTCAAATATGCATATGTGCAACATTTTCCGGTTAGATATCTAGGA
CTAGAATCGTCTGATTCTCATGTTTCGGTTGCAATTATAATAAATTCCCA
AGTTAACCTAAAAAAAAAAAAAAAAAA

AT03545.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:39:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-RA 1959 CG17083-RA 1..1959 1..1959 9795 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19109505..19111463 1959..1 9795 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:39:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23286092..23288051 1960..1 9800 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23026923..23028882 1960..1 9800 100 Minus
Blast to na_te.dros performed on 2019-03-16 22:43:40 has no hits.

AT03545.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:44:53 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19109505..19111463 1..1959 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:51:08 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1653 160..1812 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:30:58 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1653 160..1812 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:12:21 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1653 160..1812 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:04:31 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1653 160..1812 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:41:38 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1653 160..1812 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:32:01 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1959 1..1959 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:30:58 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1959 1..1959 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:21 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1959 1..1959 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:04:31 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1959 1..1959 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:41:38 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
CG17083-RA 1..1959 1..1959 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:44:53 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23286093..23288051 1..1959 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:44:53 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23286093..23288051 1..1959 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:44:53 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23286093..23288051 1..1959 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:21 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19111815..19113773 1..1959 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:42:39 Download gff for AT03545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23026924..23028882 1..1959 100   Minus

AT03545.pep Sequence

Translation from 159 to 1811

> AT03545.pep
MEEIKKFDKLAFLESYLLKHKELGKRQREYKKILSSKLKTRKETIIEASF
ETAIDQLEEEKNDLRAQIWVASGTTHKKQNNRWLELIRCHVECQENLSQD
INSLKTSISNMEKEISRMSKQIYNLNRLTIPDQQHQAYVMRARKRMTILE
NSLEVGVRQECGFTAANADLREQLIRILNHRTFFNDSYTKMVQKLNSEKK
YLIDLIEYALNTFDGCIEVYEKIDLLAKREAKERDMRRVEMQGIMRKVAA
DGDNTAFLNCKSKPRELADLQPKEYKRRDEFRRVHNKKINLYNSVLQKIL
QYTESSNMDEVIDKFQQQESLYYSFFNYANEMSYHITMLNNSVNRLFEDI
VNLKKDNSNTLQDQLDQISSLENKVRNKQESNMELHKARENNDARLENLL
QGVETVCEMCSIDASPLTKLLGDHTHVNLVNVNRFLKLLETRVQELTASV
YVMERQEEGRFDYVVKQIEKICELPTDLNDIVLTQQCPECAEGEAFNMDE
GGDGVLVHTVAEAKKKLYEKVTQPEMQYRLHSISQCRLPRSRLLAAKRNM
*

AT03545.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18018-PA 550 GF18018-PA 1..550 1..550 2583 86.5 Plus
Dana\GF18017-PA 550 GF18017-PA 1..550 1..550 1939 64.5 Plus
Dana\GF18016-PA 553 GF18016-PA 3..553 2..550 1901 64.4 Plus
Dana\GF18015-PA 552 GF18015-PA 3..551 2..549 1787 60.8 Plus
Dana\GF17068-PA 473 GF17068-PA 47..446 54..452 346 24.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12445-PA 550 GG12445-PA 1..550 1..550 2885 98.2 Plus
Dere\GG16817-PA 473 GG16817-PA 47..446 54..452 354 24.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:03:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19070-PA 549 GH19070-PA 6..549 7..550 2393 80.1 Plus
Dgri\GH14685-PA 471 GH14685-PA 49..444 56..452 350 24.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-PA 550 CG17083-PA 1..550 1..550 2814 100 Plus
CG14905-PA 473 CG14905-PA 1..452 1..458 441 24 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23214-PA 551 GI23214-PA 8..551 7..550 2414 80 Plus
Dmoj\GI13096-PA 471 GI13096-PA 45..444 54..452 354 24.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23034-PA 440 GL23034-PA 1..440 111..550 2118 88.2 Plus
Dper\GL24529-PA 473 GL24529-PA 47..446 54..452 350 24.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14316-PA 550 GA14316-PA 1..550 1..550 2590 86 Plus
Dpse\GA13343-PA 473 GA13343-PA 47..446 54..452 350 24.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23577-PA 550 GM23577-PA 1..550 1..550 2924 99.5 Plus
Dsec\GM15416-PA 473 GM15416-PA 1..446 1..452 354 24.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18392-PA 550 GD18392-PA 1..550 1..550 2926 99.6 Plus
Dsim\GD20274-PA 473 GD20274-PA 1..446 1..452 358 24.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22873-PA 549 GJ22873-PA 6..549 7..550 2356 80 Plus
Dvir\GJ13844-PA 471 GJ13844-PA 45..444 54..452 343 23.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15266-PA 549 GK15266-PA 5..549 6..550 2537 85.1 Plus
Dwil\GK13857-PA 473 GK13857-PA 47..446 54..452 362 25.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23968-PA 550 GE23968-PA 1..550 1..550 2890 98.2 Plus
Dyak\GE26136-PA 473 GE26136-PA 47..446 54..452 358 25.1 Plus

AT03545.hyp Sequence

Translation from 159 to 1811

> AT03545.hyp
MEEIKKFDKLAFLESYLLKHKELGKRQREYKKILSSKLKTRKETIIEASF
ETAIDQLEEEKNDLRAQIWVASGTTHKKQNNRWLELIRCHVECQENLSQD
INSLKTSISNMEKEISRMSKQIYNLNRLTIPDQQHQAYVMRARKRMTILE
NSLEVGVRQECGFTAANADLREQLIRILNHRTFFNDSYTKMVQKLNSEKK
YLIDLIEYALNTFDGCIEVYEKIDLLAKREAKERDMRRVEMQGIMRKVAA
DGDNTAFLNCKSKPRELADLQPKEYKRRDEFRRVHNKKINLYNSVLQKIL
QYTESSNMDEVIDKFQQQESLYYSFFNYANEMSYHITMLNNSVNRLFEDI
VNLKKDNSNTLQDQLDQISSLENKVRNKQESNMELHKARENNDARLENLL
QGVETVCEMCSIDASPLTKLLGDHTHVNLVNVNRFLKLLETRVQELTASV
YVMERQEEGRFDYVVKQIEKICELPTDLNDIVLTQQCPECAEGEAFNMDE
GGDGVLVHTVAEAKKKLYEKVTQPEMQYRLHSISQCRLPRSRLLAAKRNM
*

AT03545.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG17083-PA 550 CG17083-PA 1..550 1..550 2814 100 Plus
CG14905-PA 473 CG14905-PA 1..452 1..458 441 24 Plus