Clone AT03632 Report

Search the DGRC for AT03632

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:36
Well:32
Vector:pOTB7
Associated Gene/TranscriptCG6310-RA
Protein status:AT03632.pep: gold
Preliminary Size:582
Sequenced Size:2480

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6310 2002-01-01 Sim4 clustering to Release 2
CG6310 2003-01-01 Sim4 clustering to Release 3
CG14933 2003-01-01 Sim4 clustering to Release 3
CG6310 2008-04-29 Release 5.5 accounting
CG6310 2008-08-15 Release 5.9 accounting
CG32388 2008-08-15 Release 5.9 accounting
rab3-GAP 2008-08-15 Release 5.9 accounting
CG6310 2008-12-18 5.12 accounting
CG32388 2008-12-18 5.12 accounting
rab3-GAP 2008-12-18 5.12 accounting

Clone Sequence Records

AT03632.complete Sequence

2480 bp (2480 high quality bases) assembled on 2002-02-27

GenBank Submission: AY089250

> AT03632.complete
CGGTTATCCATGATGCACACACCCCGCCTGTCGAATATTAAGCGGGCATC
GGTGCTCCTCGTCACCGCCCTGCTCCTCTATGTCTTCGTTTTCTCCAGTG
GCTATCAGAAGTACCAGATCGAGGGCATTATCAAGCAGAGTCAACCGGAA
AAGGTCTGGGAGTATGTGGCGGATTTTAATAAGATGCGTCTGCTCAATCC
CACCATTTTAAACTTCAAGATCCTAGCTGATCATGGCCACGCCCACGACT
GGCGTTACACGGTGCAATACACAGAGAGATTATCCCATTGGCCATACTGG
CTGAATACGGCCACGGCCAAGTACGTGGTCACCAAGTCATTGCCCGGAGT
ATCGCCCGTGGCCTATGCCATTAAGTCCACGCATCAGACTTGCTTCTTTG
CCGGATTCTATTGCCTACAATCACTGAGTGAATTCACGTTCAGAAACTCC
AATGGTGATACCTTTGCCCAGGAGAACATCCAGTATCAGTGTCCACCACT
CTTGGGCGGCATGTGTAGGCGGGAACTGGAGTTCCAGCGCCAGGCGGTGA
TGCACAACTTAACGATAATATTCGGAAAACAGAGAGGATAGCATACCAGG
ATCTAGTTCAAATTTAAATCATATGTGCAAACAACTAATTGACTTACCTA
CCAATAATCTTAATTCCTAATAAAAAAAAAACACACACAAAAAAAAAAAA
AAAAAACTCGAGTTTTTTTTTTTTTTTTTTTAAATTTTTTTTTTTATTTT
ATTAAATATACATCCTTATATAATCCTTGTAGGCATAAGCTTCACATCAA
ATTCGTGTTGAATACATCCTCCTATCGGTGCAGATCTTAGTATCCTTTTT
CTTGAAAGTAATTAATATGATGCTTTTCGTAGGTTGTTTAAATCGCTACT
AGGTTGATAAGTATAAGACAATTAATGGGACCGCATGTGGTGCTTTAACA
ATCAATATTGGGTTCATTCTTGAATCCATAAAAATCATGAGAGAAATGTA
AAATAACCAAGTGTTTATGTGTCATCCTCACTCCTAATTCTGCAGGATAC
GCACGGCGTTGTACATCTGGCCAATGATGGGCAGCTGCTTGGACTCGCGC
CGGCAAAGGTATTTGTAGACATGCGACAACAGCCTGTCCAGGGCAGCCAC
ATCGATCTCGTCGGGCTTGGTGGCCGCGATCTGAATGTTGTTCTCCGTCA
TCGGTTCCTTCAGGTTGTCTAGGTAGGCCAGCAACTGGTGGCCAACAGAG
GCAATCTTCAGGAACGTGGACTGCGAGCTCTGTGCGTAAAGATTAAGTCT
ACGGCCAGCGATCTCCAGCAGCAGTCGGCCCAGCTCCTCGTCATCGCTGA
TGTCCTGGAGCAACACTTGAGCCTCCGCATCATACCCAAAGGCGTACAGT
TCCACCACCTGGAGGAGGGAAAAATATTTGGAATATATTTTCTATTCCAT
TGTGTTTCCTCTGTTGTGCTCTCTACGGCAAAATTTCTGTTACAGTTATT
TGATAAAAAATTATACAGTTAAATCATGTTCAAAGTGCGCAGCTTAGCGC
TCATGAAATTGTGTGAAGGCGTTTTCGGCGCACGACTAATGGGCAAATCG
CCGAAGGATTCGGGCAAGGATTCTTGCAAGGGTGCCGATTCCAAAAAGAA
GAAAGACAAAAAGAAGAAGGATATGTGTGGCAGAACTGTTGTTCCCACTT
CACCACGTTGCAAAAACAAACCCGGCGGCTCAGACAAATCCAAAGATGAA
TGCAAGAAAAAGTAGCAGAGTTCGAATAAATCATTTCAGCCCCTTAAACA
AAATCACAGCAGGCCTTTAAACAAACTTCAAGCTGCTTTGGCCTAAGTCA
AAATTAAAGTTACAAAAGAAAAAAAAACCATGTCCCGACTTTTGCTGCAG
TGCCGCAGAACTTTGCTGATCCTTCGCCATCAAACGGCGGTGGAAAATGA
GAAAGGACTCTTTGGCAAACTGCTGGGAAAGTGCCAGTCCTTTGGCAAGG
ATGAAAAGGATCTTGGCCAGCAGGAGGAGGAGGAATCAAAGAGATCTTAG
TTAGGAAATTCAAATGTCTGCAACAGAAGCTACCCCGTTCCCATTGAAGA
TCATATAATAGGCAGCAAATTACCATATTGTTGCCGGAGATCCCAGATGA
ATCGGGTCCATTTTACGGGCAGCTCATAAAACGGATCGTGCACAGACATT
ATAAAGCCATAAAGCATCAACTAAAATCGGTCAAAAATAGCTTTGGAGGA
GCACAGGCGATGGCCAGACTTAGACAAGTGATACAACATCCATTTCCCTG
GTCGGTTTACGATGTCTGAAAATGCCAGGCATCGAAATTCGACGGCGAAG
GGCAGAATGACCAGCAGCGAGATGTATCTAAATTTGAAGCGAACCAAATT
GTTAGATAAAAGCAATCGTTTCTCACTGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT03632.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG32388-RA 1064 CG32388-RA 99..1053 1479..2430 4525 98.4 Plus
CG6310-RA 989 CG6310-RA 297..986 1..690 3375 99.2 Plus
rab3-GAP-RA 4440 rab3-GAP-RA 3760..4437 1411..732 3270 98.9 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:44:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12056967..12057444 732..1211 2290 99 Plus
chr3L 24539361 chr3L 6976160..6976540 2066..1686 1860 99.2 Minus
chr3L 24539361 chr3L 6975734..6976087 2428..2075 1770 100 Minus
chr2L 23010047 chr2L 12057507..12057774 1211..1478 1325 99.6 Plus
chr3L 24539361 chr3L 11059929..11060200 687..416 1315 98.9 Minus
chr3L 24539361 chr3L 6976605..6976811 1685..1479 1020 99.5 Minus
chr3L 24539361 chr3L 11060542..11060747 206..1 1015 99.5 Minus
chr3L 24539361 chr3L 11060262..11060470 415..207 940 96.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:39:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12058290..12058767 732..1211 2275 98.8 Plus
3L 28110227 3L 6983899..6984279 2066..1686 1890 99.7 Minus
3L 28110227 3L 6983471..6983826 2430..2075 1735 99.2 Minus
3L 28110227 3L 11069032..11069306 690..416 1375 100 Minus
2L 23513712 2L 12058830..12059097 1211..1478 1325 99.6 Plus
3L 28110227 3L 11069648..11069853 206..1 1030 100 Minus
3L 28110227 3L 11069368..11069576 415..207 970 97.6 Minus
3L 28110227 3L 6984343..6984549 1685..1479 930 96.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12058290..12058767 732..1211 2285 98.7 Plus
3L 28103327 3L 6976999..6977379 2066..1686 1890 99.7 Minus
3L 28103327 3L 6976571..6976926 2430..2075 1735 99.1 Minus
3L 28103327 3L 11062132..11062406 690..416 1375 100 Minus
2L 23513712 2L 12058830..12059097 1211..1478 1325 99.6 Plus
3L 28103327 3L 11062748..11062953 206..1 1030 100 Minus
3L 28103327 3L 11062468..11062676 415..207 970 97.6 Minus
3L 28103327 3L 6977443..6977649 1685..1479 930 96.6 Minus
Blast to na_te.dros performed 2019-03-16 22:44:00
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 477..581 814..713 139 61.9 Minus

AT03632.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:45:01 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12056996..12057443 761..1210 99 <- Plus
chr2L 12057507..12057774 1211..1478 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:53:36 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG6310-RA 1..582 10..591 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:33:42 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG6310-RA 1..582 10..591 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:12:32 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG6310-RA 1..582 10..591 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:06:05 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG6310-RA 1..582 10..591 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:41:51 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG6310-RA 1..582 10..591 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:36 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 21..976 1474..2428 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:33:42 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 21..976 1474..2428 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:32 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 35..990 1474..2428 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:06:05 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 21..976 1474..2428 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:41:51 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
CG32388-RA 35..990 1474..2428 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:45:01 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12058287..12058766 729..1210 98 <- Plus
2L 12058830..12059097 1211..1478 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:45:01 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12058287..12058766 729..1210 98 <- Plus
2L 12058830..12059097 1211..1478 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:45:01 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12058287..12058766 729..1210 98 <- Plus
2L 12058830..12059097 1211..1478 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:32 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12058287..12058766 729..1210 98 <- Plus
arm_2L 12058830..12059097 1211..1478 99 == Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:39:56 Download gff for AT03632.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12058287..12058766 729..1210 98 <- Plus
2L 12058830..12059097 1211..1478 99 == Plus

AT03632.pep Sequence

Translation from 9 to 590

> AT03632.pep
MMHTPRLSNIKRASVLLVTALLLYVFVFSSGYQKYQIEGIIKQSQPEKVW
EYVADFNKMRLLNPTILNFKILADHGHAHDWRYTVQYTERLSHWPYWLNT
ATAKYVVTKSLPGVSPVAYAIKSTHQTCFFAGFYCLQSLSEFTFRNSNGD
TFAQENIQYQCPPLLGGMCRRELEFQRQAVMHNLTIIFGKQRG*

AT03632.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23806-PA 192 GF23806-PA 1..190 2..191 869 81.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13946-PA 193 GG13946-PA 1..193 1..193 994 93.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16571-PA 187 GH16571-PA 2..186 6..190 749 71.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6310-PA 193 CG6310-PA 1..193 1..193 1034 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13862-PA 190 GI13862-PA 1..189 2..190 701 69.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22663-PA 193 GL22663-PA 1..192 2..192 778 78.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:57:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23374-PA 192 GA23374-PA 1..191 2..192 820 80.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:57:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24781-PA 193 GM24781-PA 1..193 1..193 1032 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12832-PA 83 GD12832-PA 1..83 111..193 448 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11723-PA 190 GJ11723-PA 1..189 2..190 790 74.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11439-PA 192 GK11439-PA 1..190 2..191 751 70 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:57:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20244-PA 192 GE20244-PA 1..191 2..192 956 95.8 Plus

AT03632.hyp Sequence

Translation from 678 to 813

> AT03632.hyp
KHTQKKKKIKIFFFILLNIHVHNPCRHKLHIKFVLNTSSYRCRS*
Sequence AT03632.hyp has no blast hits.