![]() | BDGP Sequence Production Resources |
Search the DGRC for AT04270
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 42 |
Well: | 70 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG7794-RA |
Protein status: | AT04270.pep: gold |
Preliminary Size: | 1403 |
Sequenced Size: | 1569 |
Gene | Date | Evidence |
---|---|---|
CG7794 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7794 | 2002-02-22 | Blastp of sequenced clone |
CG7794 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7794 | 2008-04-29 | Release 5.5 accounting |
CG7794 | 2008-08-15 | Release 5.9 accounting |
CG7794 | 2008-12-18 | 5.12 accounting |
1569 bp (1569 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089253
> AT04270.complete GTTTTCCTTGTTTAGATTGTCAATTCGATTTGATTTTAGAACATTTTGGA AAACTACATTCCCAGAGAAAGGAAATTAATGGTTAAAATTAAGATATGAC ACATGTCCGGAAAGGGGGAGATCATCCAGATCCACATTGGCCAGGCCGGT GTGCAGATAGCCAACGCCTGTTGGGAGCTCTTCTGTCTGGAGCACGGCAT TTTGGCCAATGGAAGACTAACCCAGTCGCCCATGGACGACTCGTTCCTCA CGTTCTTTGAGTTCACCAGCCATCAGCCGTGTGTGCAACCTCGACTCGTC ATGATCGACACGGAGCCCACAGTGATAGATGAAATCCGTACCGGCTCCTA CCGCAACCTCTTTCATCCGGATACTTTGATTACGGGCAAGGATGACAGTG GCAGTAACTTCGCCAGGGGCTATAATCTGATGGCCAGCGAGCTGTTGGAT CGCTCCATGAACGCCATTCGTCGCGTGGCGGATCGTTGCAGAAATCTCAG GGGTTTCCTGGTCTTTCGAGCAATCGGCGGAGGTTCTGGTTCCGGGCTAG GGACTCGCATCATGGAGAGACTGGTCGAAGACTTTGGCAAGAAGATGACT GTTGTGGAGTTCCTCGTTTATCCTTCGCCTTCAATCTCTCCGGTTATTGT GGAACCCTACAACGCACTGCTGGCTGCCCATTTCTCCATGGACTGCGCCG ATGTATCGTTTATTGTGGACAATGAAGCTCTATACGACATATGTGCTAAT ACACTCAATGTCCCTGCTCCCACATATACGAATCTCAATAGGATCATCGC ACAAGTGGTTTCCAGCTTTACGGCCTCACAGCGTTTTGGTGGCGGATCGA CCGTGAGTTTTCAGGAGCTGCAGACGAACCTGGTGCCATATCCCCGAATC CACTATCCGCTGATCAACTACGCACCACTGGTACCCATTTCGCACTCGCA GTTCGTCAATATGTCGACGGCCCAGCTAACGGGTCAGTGTTTCCAGATGA GCAACCAAATGGTCAGATGCAATCCCTCGCATGGCAAGTACATGGCCAGT GTGCTGCTCTACCGCGGTGATATCGCACCCAATGAGATCAATACGGCGCT GGAGAACATCAAGCGGAACAGGTCTTTCCGTTTTGTCGACTGGTCGCCCA CGGGCTTTAAGATCGGCGTTAGCCCCATGCCGCCGTACTATGTTCCTGGC GGCGATCTGGCGCCCACCAATCGCGCCTGCGTGGCCATCTCGAACAACAC GAACATCCGGATCGCCTGGTGCCGCCTGGTCAACAAGTTCGACAAGCTCT ATCAGCGGCGAGCCTTCGTCTATCACTATGTGGGCGAAGGACTCGAGGAG GGCAACTTCAACGAGGCCTCCGAGAACATTTGCCAGCTGGTGCACGACTA TCTGGAGGTGGATGCATCGGCTCCCACCTCGCGACGCGATTCCGATCCGG AGGAGGACTCTCTCAACTAAAGTGTGCTCTGTATGTGCCCCTTTTGTCTG CATTTTTGAATCAACGAAATTTTAATAAATTTAACGTATTGAATATTTTA AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7794-RA | 1575 | CG7794-RA | 5..1554 | 1..1550 | 7645 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13848868..13849784 | 633..1549 | 4540 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 13848113..13848440 | 1..328 | 1640 | 100 | Plus |
chr3R | 27901430 | chr3R | 13848497..13848802 | 327..632 | 1530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18024462..18025379 | 633..1550 | 4515 | 99.5 | Plus |
3R | 32079331 | 3R | 18023707..18024034 | 1..328 | 1640 | 100 | Plus |
3R | 32079331 | 3R | 18024091..18024396 | 327..632 | 1500 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17765293..17766210 | 633..1550 | 4515 | 99.4 | Plus |
3R | 31820162 | 3R | 17764538..17764865 | 1..328 | 1640 | 100 | Plus |
3R | 31820162 | 3R | 17764922..17765227 | 327..632 | 1500 | 99.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13848113..13848440 | 1..328 | 100 | -> | Plus |
chr3R | 13848499..13848802 | 329..632 | 100 | -> | Plus |
chr3R | 13848868..13849784 | 633..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1368 | 103..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1368 | 103..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1368 | 103..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1368 | 103..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1368 | 103..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1549 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1549 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1549 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1549 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7794-RA | 1..1549 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18023707..18024034 | 1..328 | 100 | -> | Plus |
3R | 18024093..18024396 | 329..632 | 99 | -> | Plus |
3R | 18024462..18025378 | 633..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18023707..18024034 | 1..328 | 100 | -> | Plus |
3R | 18024093..18024396 | 329..632 | 99 | -> | Plus |
3R | 18024462..18025378 | 633..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18023707..18024034 | 1..328 | 100 | -> | Plus |
3R | 18024093..18024396 | 329..632 | 99 | -> | Plus |
3R | 18024462..18025378 | 633..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13849815..13850118 | 329..632 | 99 | -> | Plus |
arm_3R | 13849429..13849756 | 1..328 | 100 | -> | Plus |
arm_3R | 13850184..13851100 | 633..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17764538..17764865 | 1..328 | 100 | -> | Plus |
3R | 17764924..17765227 | 329..632 | 99 | -> | Plus |
3R | 17765293..17766209 | 633..1549 | 99 | Plus |
Translation from 102 to 1469
> AT04270.hyp MSGKGEIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT FFEFTSHQPCVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSG SNFARGYNLMASELLDRSMNAIRRVADRCRNLRGFLVFRAIGGGSGSGLG TRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFSMDCAD VSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGST VSFQELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMS NQMVRCNPSHGKYMASVLLYRGDIAPNEINTALENIKRNRSFRFVDWSPT GFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCRLVNKFDKLY QRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPE EDSLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7794-PA | 455 | CG7794-PA | 1..455 | 1..455 | 2397 | 100 | Plus |
alphaTub84B-PA | 450 | CG1913-PA | 3..435 | 6..436 | 1279 | 53.6 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 3..435 | 6..436 | 1270 | 53.6 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 3..441 | 6..442 | 1264 | 52.8 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 3..461 | 6..451 | 1158 | 48.8 | Plus |
Translation from 102 to 1469
> AT04270.pep MSGKGEIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMDDSFLT FFEFTSHQPCVQPRLVMIDTEPTVIDEIRTGSYRNLFHPDTLITGKDDSG SNFARGYNLMASELLDRSMNAIRRVADRCRNLRGFLVFRAIGGGSGSGLG TRIMERLVEDFGKKMTVVEFLVYPSPSISPVIVEPYNALLAAHFSMDCAD VSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGST VSFQELQTNLVPYPRIHYPLINYAPLVPISHSQFVNMSTAQLTGQCFQMS NQMVRCNPSHGKYMASVLLYRGDIAPNEINTALENIKRNRSFRFVDWSPT GFKIGVSPMPPYYVPGGDLAPTNRACVAISNNTNIRIAWCRLVNKFDKLY QRRAFVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPE EDSLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16752-PA | 452 | GF16752-PA | 1..452 | 1..452 | 2197 | 91.4 | Plus |
Dana\GF17649-PA | 450 | GF17649-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dana\GF11529-PA | 449 | GF11529-PA | 3..442 | 6..443 | 1250 | 52.7 | Plus |
Dana\GF25153-PA | 462 | GF25153-PA | 3..446 | 6..436 | 1131 | 48.7 | Plus |
Dana\GF12605-PA | 447 | GF12605-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22615-PA | 455 | GG22615-PA | 1..455 | 1..455 | 2427 | 98.9 | Plus |
Dere\GG13808-PA | 450 | GG13808-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dere\GG14119-PA | 450 | GG14119-PA | 3..435 | 6..436 | 1257 | 53.6 | Plus |
Dere\GG17337-PA | 449 | GG17337-PA | 3..442 | 6..443 | 1252 | 52.7 | Plus |
Dere\GG15399-PA | 462 | GG15399-PA | 3..461 | 6..451 | 1154 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15056-PA | 449 | GH15056-PA | 1..449 | 1..451 | 2010 | 86.5 | Plus |
Dgri\GH22334-PA | 455 | GH22334-PA | 7..454 | 4..447 | 1266 | 52.9 | Plus |
Dgri\GH19001-PA | 450 | GH19001-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dgri\GH16316-PA | 460 | GH16316-PA | 3..446 | 6..436 | 1137 | 49.8 | Plus |
Dgri\GH20203-PA | 447 | GH20203-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7794-PA | 455 | CG7794-PA | 1..455 | 1..455 | 2397 | 100 | Plus |
alphaTub84B-PA | 450 | CG1913-PA | 3..435 | 6..436 | 1279 | 53.6 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 3..435 | 6..436 | 1270 | 53.6 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 3..441 | 6..442 | 1264 | 52.8 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 3..461 | 6..451 | 1158 | 48.8 | Plus |
betaTub97EF-PB | 457 | CG4869-PB | 3..440 | 6..451 | 757 | 33.1 | Plus |
betaTub97EF-PC | 457 | CG4869-PC | 3..440 | 6..451 | 753 | 33.1 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 3..439 | 6..452 | 742 | 33 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 3..441 | 6..452 | 734 | 32.1 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 3..442 | 6..450 | 718 | 32.7 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 3..443 | 6..450 | 718 | 32.7 | Plus |
betaTub56D-PA | 456 | CG9277-PA | 25..448 | 20..452 | 710 | 32.6 | Plus |
CG32396-PA | 462 | CG32396-PA | 3..421 | 6..433 | 635 | 31.2 | Plus |
gammaTub23C-PA | 475 | CG3157-PA | 4..429 | 6..425 | 520 | 30 | Plus |
gammaTub37C-PB | 457 | CG17566-PB | 4..436 | 6..433 | 496 | 28.3 | Plus |
gammaTub37C-PA | 457 | CG17566-PA | 4..436 | 6..433 | 496 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23711-PA | 452 | GI23711-PA | 1..447 | 1..448 | 2119 | 88.8 | Plus |
Dmoj\GI23057-PA | 450 | GI23057-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dmoj\GI23620-PA | 414 | GI23620-PA | 11..412 | 45..448 | 1137 | 52.2 | Plus |
Dmoj\GI13261-PA | 461 | GI13261-PA | 3..446 | 6..436 | 1119 | 48.9 | Plus |
Dmoj\GI20729-PA | 447 | GI20729-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12586-PA | 458 | GL12586-PA | 1..451 | 1..451 | 2174 | 90.5 | Plus |
Dper\GL12416-PA | 1216 | GL12416-PA | 769..1201 | 6..436 | 1274 | 53.6 | Plus |
Dper\GL12714-PA | 464 | GL12714-PA | 3..446 | 6..436 | 1133 | 48.9 | Plus |
Dper\GL16725-PA | 447 | GL16725-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Dper\GL23875-PA | 511 | GL23875-PA | 3..495 | 6..452 | 649 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20592-PA | 458 | GA20592-PA | 1..451 | 1..451 | 2174 | 90.5 | Plus |
Dpse\GA15128-PA | 450 | GA15128-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dpse\GA20973-PA | 464 | GA20973-PA | 3..446 | 6..436 | 1133 | 48.9 | Plus |
Dpse\GA27086-PB | 455 | GA27086-PB | 3..439 | 6..452 | 713 | 34.6 | Plus |
Dpse\GA27686-PA | 447 | GA27686-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15273-PA | 455 | GM15273-PA | 1..455 | 1..455 | 2421 | 98.7 | Plus |
Dsec\GM10931-PA | 450 | GM10931-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dsec\GM10965-PA | 450 | GM10965-PA | 3..435 | 6..436 | 1256 | 53.3 | Plus |
Dsec\GM26223-PA | 449 | GM26223-PA | 3..442 | 6..443 | 1252 | 52.7 | Plus |
Dsec\GM25175-PA | 462 | GM25175-PA | 3..461 | 6..451 | 1147 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19196-PA | 455 | GD19196-PA | 1..455 | 1..455 | 2421 | 98.7 | Plus |
Dsim\GD19909-PA | 450 | GD19909-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dsim\GD19940-PA | 450 | GD19940-PA | 3..435 | 6..436 | 1256 | 53.3 | Plus |
Dsim\GD20767-PA | 449 | GD20767-PA | 3..442 | 6..443 | 1252 | 52.7 | Plus |
Dsim\GD14204-PA | 462 | GD14204-PA | 3..461 | 6..451 | 1147 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23270-PA | 450 | GJ23270-PA | 1..450 | 1..451 | 2173 | 90.5 | Plus |
Dvir\GJ24568-PA | 450 | GJ24568-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dvir\GJ11156-PA | 414 | GJ11156-PA | 11..412 | 45..448 | 1138 | 52.2 | Plus |
Dvir\GJ12031-PA | 460 | GJ12031-PA | 3..446 | 6..436 | 1119 | 48.7 | Plus |
Dvir\GJ20466-PA | 447 | GJ20466-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11238-PA | 456 | GK11238-PA | 1..448 | 1..448 | 2194 | 91.7 | Plus |
Dwil\GK14362-PA | 449 | GK14362-PA | 3..447 | 6..448 | 1265 | 52.8 | Plus |
Dwil\GK12743-PA | 450 | GK12743-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dwil\GK16627-PA | 462 | GK16627-PA | 3..446 | 6..436 | 1136 | 48.9 | Plus |
Dwil\GK15706-PA | 447 | GK15706-PA | 3..422 | 6..433 | 691 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25507-PA | 455 | GE25507-PA | 1..455 | 1..455 | 2406 | 97.8 | Plus |
Dyak\alphaTub84B-PA | 450 | GE24900-PA | 3..435 | 6..436 | 1265 | 53.6 | Plus |
Dyak\GE24934-PA | 450 | GE24934-PA | 3..435 | 6..436 | 1257 | 53.6 | Plus |
Dyak\GE24741-PA | 449 | GE24741-PA | 3..442 | 6..443 | 1252 | 52.7 | Plus |
Dyak\GE20865-PA | 462 | GE20865-PA | 3..461 | 6..451 | 1148 | 48.6 | Plus |