![]() | BDGP Sequence Production Resources |
Search the DGRC for AT04275
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 42 |
Well: | 75 |
Vector: | pOTB7 |
Associated Gene/Transcript | Menl-2-RD |
Protein status: | AT04275.pep: gold |
Preliminary Size: | 2015 |
Sequenced Size: | 2145 |
Gene | Date | Evidence |
---|---|---|
CG7969 | 2002-01-01 | Sim4 clustering to Release 2 |
CG30097 | 2002-02-22 | Blastp of sequenced clone |
Menl-2 | 2008-04-29 | Release 5.5 accounting |
Menl-2 | 2008-08-15 | Release 5.9 accounting |
Menl-1 | 2008-08-15 | Release 5.9 accounting |
Menl-1 | 2008-12-18 | 5.12 accounting |
Menl-2 | 2008-12-18 | 5.12 accounting |
2145 bp (2145 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089254
> AT04275.complete CCCAAATGAAAAGGTACCCATAAAAATTCGGACTTGCAAAAAAAATTTTA AACCATGGAATTTCGCCGGCTGCATCCATTGCTGCGCCTTGCATCCCGTC CTCTTCTGAGTTCCAGCAGGCGGTTCAGCGTTTATGATGACGAAATGGAA CAAATAACAAGACCTGACTGGCATGTTGTTATGAATGGAAAGTACAATAA GGTGGGGCCTTGCGTTCACCATTAAGGAACGGCAACGTTTGGGCATCATG GGATTGATGCCCTGCTCCGTGCGCTCCATGGATGACCAGATGAATGCGGC CCTGGCGAATTTTGAGGCGAGACCCACAGATATCGCCCGCTTTACATACT TGAGTGCTGTCCACCATCGACACCGGCGACTGTACTACCGGTTCATCAAG GAGAACATCGAGAAATCGCTACCCATTGTTTATACACCAACGGTGGGCGA TGTGGTGGCCACCTATGGACTGAACTTCCAGCAGGCCATCAGCCTGTTCA TCAGCATTCACGACAAGGGCCACATCCGGGATCTTATGCACAACTGGGTG GACGAGGGCGTTAAGGCCATCTGTGTGACGGATGGCGGAAGGGTACTGGG TCTCGGGGACATGGGTGCCAATGCGATGGGCATTAGTTTGGGCAAAATGA TCCTATATACGGCTTTGGGTAGCATTCCGCCGAGCACACTAATGCCCGTT TGCCTCGACGTGGGTACCGATAATCAGGCCCTGCTGCAGGATCCCCTTTA TGTTGGGGCACGAATACCGCGGGTCAAGGGACCGGAATACGATGAACTGG TGGATGAATTTATGGAGTCGGCGGTTAAATGCTTCGGAAACAACACCTTC ATCCACTTCGAGGACTTTGCCACTCCAAATGCCTTGAAGTTCTTGGAAAA ATACCAGTACAAGTACTGTTGCTTCAACGATGATATTCAGGGAACGGGAG CCACTGGCCTGGCCGCGTTCATCAATGTGGAACGCATCACTGGCCGTAAA TTGGAGGACACCGTATTTCTCTTCGTAGGAGCTGGGAGTGCGGCATTGGG TATCGCCAATATGCTGGCCATGGAACTGGAGGTACGCGGCATTCCTGCCG AGGAGGCAACTAAAAATATCTACTTGATGGATGTCAATGGTATTTTGACA CCGGAGTCACCTAATCCACCGGAGATGGGTAAAATATTTATAAAGTCCAT GGAGCCCATGAAGGATATGATGGCCGTGCTGAAGAAGCTTAAGCCATCCG TACTTGTTGGAGCAACTGGTGTGGGTGGAATTTTCAATGAAGAAGTACTG AAAACCATGGCGAAAAATCACGAACGTCCTGCAGTTTTTCCCCTCTCGAA TCCAACTGCCAACTCGGAATGCACCGCCGAGCAGGCTTTTACACACACTG AGGGTCGCGTGCTCTTCGGATCCGGATCGCCCTTTCCACCAGTGGTCATC AATGGCAAAAGATATCGCCCCGCTCAGGCCAACAACTGTCTGACTTTTCC GGGCATCGCATTGGCCGCCATTACGGCCAAGGCCCGGTATCTGCCAAACG AAGTATTTTCCGTTGTGTCGCACGAGCTGGCCAGGAATACACCGCAGGAA CTACTTGACGAAGGCACTCTGTTTCCGCCCATCAAGGATGCACATAATGT GGCCTTCAATGTGGGCGTTGCCATGACTCAGTATCTAATTGATAATGATC TTTCAAATGTTTACCCAAAGCCCGATGATATCTGTGAGTTTGTCAAGAGA AGTCTGTATAAGTTCGATTACAGAAATTCCCTGCCAACTACGTGGGACTA TCCCGTGGAACCGCCAACACCGAAACCCAAAACCAAACCCAAAACGAAGC CGAAGGAATAAAGCACGAAGTAAACTTGGCCGGGATACCTTTATATCGAA CACTTTTGACCTAAGAAAGAAAGCCTTGTGTGTAATTAGTTGCAGATGCA AGTGTACAAAGACCTACATACACAAAGACATATACAAGCTGGCACGATAA ATGCCCGACATTTTAACGTTATTATTGTCCTGTCAACGGGAAGCCAGTTG ACATGCTCGTGCGCCTGTGTGTGTGTTTGTGTATCCAGCTGATTTGCATA TAAAATAGGACGAAATGTCTGCTCACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12302987..12304185 | 1403..205 | 5980 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 12302113..12302543 | 2127..1697 | 2140 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 12302626..12302922 | 1697..1401 | 1470 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 12304245..12304450 | 206..1 | 1030 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16415689..16416887 | 1403..205 | 5995 | 100 | Minus |
2R | 25286936 | 2R | 16414810..16415245 | 2132..1697 | 2180 | 100 | Minus |
2R | 25286936 | 2R | 16415328..16415624 | 1697..1401 | 1485 | 100 | Minus |
2R | 25286936 | 2R | 16416945..16417150 | 206..1 | 1030 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16416888..16418086 | 1403..205 | 5995 | 100 | Minus |
2R | 25260384 | 2R | 16416009..16416444 | 2132..1697 | 2180 | 100 | Minus |
2R | 25260384 | 2R | 16416527..16416823 | 1697..1401 | 1485 | 100 | Minus |
2R | 25260384 | 2R | 16418144..16418349 | 206..1 | 1030 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12302113..12302542 | 1698..2127 | 99 | <- | Minus |
chr2R | 12302626..12302920 | 1403..1697 | 99 | <- | Minus |
chr2R | 12302988..12304184 | 206..1402 | 99 | <- | Minus |
chr2R | 12304246..12304450 | 1..205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..1803 | 55..1861 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RE | 1..1803 | 55..1861 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..1803 | 55..1861 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..1803 | 55..1861 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..1803 | 55..1861 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..2115 | 9..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RD | 1..2127 | 1..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RD | 1..2127 | 1..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RA | 1..2115 | 9..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Menl-2-RD | 1..2127 | 1..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16416946..16417150 | 1..205 | 100 | Minus | |
2R | 16414815..16415244 | 1698..2127 | 100 | <- | Minus |
2R | 16415328..16415622 | 1403..1697 | 100 | <- | Minus |
2R | 16415690..16416886 | 206..1402 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16416946..16417150 | 1..205 | 100 | Minus | |
2R | 16414815..16415244 | 1698..2127 | 100 | <- | Minus |
2R | 16415328..16415622 | 1403..1697 | 100 | <- | Minus |
2R | 16415690..16416886 | 206..1402 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16416946..16417150 | 1..205 | 100 | Minus | |
2R | 16414815..16415244 | 1698..2127 | 100 | <- | Minus |
2R | 16415328..16415622 | 1403..1697 | 100 | <- | Minus |
2R | 16415690..16416886 | 206..1402 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12302320..12302749 | 1698..2127 | 100 | <- | Minus |
arm_2R | 12302833..12303127 | 1403..1697 | 100 | <- | Minus |
arm_2R | 12303195..12304391 | 206..1402 | 100 | <- | Minus |
arm_2R | 12304451..12304655 | 1..205 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16416527..16416821 | 1403..1697 | 100 | <- | Minus |
2R | 16416014..16416443 | 1698..2127 | 100 | <- | Minus |
2R | 16416889..16418085 | 206..1402 | 100 | <- | Minus |
2R | 16418145..16418349 | 1..205 | 100 | Minus |
Translation from 184 to 1860
> AT04275.pep MESTIRWGLAFTIKERQRLGIMGLMPCSVRSMDDQMNAALANFEARPTDI ARFTYLSAVHHRHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQ AISLFISIHDKGHIRDLMHNWVDEGVKAICVTDGGRVLGLGDMGANAMGI SLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARIPRVKGP EYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDD IQGTGATGLAAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEV RGIPAEEATKNIYLMDVNGILTPESPNPPEMGKIFIKSMEPMKDMMAVLK KLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFPLSNPTANSECTAEQ AFTHTEGRVLFGSGSPFPPVVINGKRYRPAQANNCLTFPGIALAAITAKA RYLPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQY LIDNDLSNVYPKPDDICEFVKRSLYKFDYRNSLPTTWDYPVEPPTPKPKT KPKTKPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11265-PA | 615 | GF11265-PA | 43..578 | 2..537 | 1870 | 62.7 | Plus |
Dana\GF11264-PA | 603 | GF11264-PA | 54..603 | 9..557 | 1503 | 49.6 | Plus |
Dana\GF23280-PA | 622 | GF23280-PA | 70..607 | 8..543 | 1357 | 45.7 | Plus |
Dana\GF18099-PA | 814 | GF18099-PA | 281..812 | 8..537 | 1261 | 43.6 | Plus |
Dana\GF11263-PA | 619 | GF11263-PA | 69..599 | 8..537 | 742 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22268-PA | 602 | GG22268-PA | 43..602 | 1..558 | 2648 | 88.6 | Plus |
Dere\GG22267-PA | 610 | GG22267-PA | 58..597 | 8..546 | 1510 | 49.6 | Plus |
Dere\GG11530-PA | 617 | GG11530-PA | 65..602 | 8..543 | 1356 | 46.1 | Plus |
Dere\GG17100-PA | 769 | GG17100-PA | 236..767 | 8..537 | 1249 | 43.6 | Plus |
Dere\GG22266-PA | 634 | GG22266-PA | 85..607 | 8..530 | 840 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20647-PA | 608 | GH20647-PA | 58..604 | 8..553 | 1532 | 51.6 | Plus |
Dgri\GH17523-PA | 629 | GH17523-PA | 77..614 | 8..543 | 1356 | 45 | Plus |
Dgri\GH20613-PA | 869 | GH20613-PA | 305..842 | 8..543 | 1356 | 45 | Plus |
Dgri\GH19210-PA | 815 | GH19210-PA | 282..813 | 8..537 | 1220 | 42.9 | Plus |
Dgri\GH20645-PA | 615 | GH20645-PA | 65..587 | 10..529 | 783 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Menl-2-PD | 558 | CG7969-PD | 1..558 | 1..558 | 2931 | 100 | Plus |
Menl-2-PE | 600 | CG7969-PE | 50..600 | 8..558 | 2892 | 100 | Plus |
Menl-2-PA | 600 | CG7969-PA | 50..600 | 8..558 | 2892 | 100 | Plus |
Menl-1-PD | 610 | CG7964-PD | 59..597 | 9..546 | 1451 | 49 | Plus |
Men-b-PA | 617 | CG5889-PA | 65..602 | 8..543 | 1336 | 45.8 | Plus |
Men-b-PB | 621 | CG5889-PB | 65..602 | 8..543 | 1336 | 45.8 | Plus |
Men-b-PC | 624 | CG5889-PC | 65..602 | 8..543 | 1336 | 45.8 | Plus |
Men-PC | 578 | CG10120-PC | 45..576 | 8..537 | 1206 | 43.6 | Plus |
Men-PA | 759 | CG10120-PA | 226..757 | 8..537 | 1206 | 43.6 | Plus |
Men-PB | 763 | CG10120-PB | 230..761 | 8..537 | 1206 | 43.6 | Plus |
CG7848-PA | 633 | CG7848-PA | 78..609 | 2..533 | 775 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19012-PA | 609 | GI19012-PA | 58..599 | 8..548 | 1491 | 51.4 | Plus |
Dmoj\GI23201-PA | 622 | GI23201-PA | 70..607 | 8..543 | 1356 | 44.8 | Plus |
Dmoj\GI24244-PA | 818 | GI24244-PA | 285..816 | 8..537 | 1255 | 43 | Plus |
Dmoj\GI19011-PA | 610 | GI19011-PA | 52..587 | 5..534 | 754 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11345-PA | 597 | GL11345-PA | 45..594 | 6..553 | 1863 | 60 | Plus |
Dper\GL11344-PA | 602 | GL11344-PA | 48..586 | 8..546 | 1564 | 50.3 | Plus |
Dper\GL23904-PA | 625 | GL23904-PA | 73..610 | 8..543 | 1348 | 45 | Plus |
Dper\GL23167-PA | 438 | GL23167-PA | 1..436 | 104..537 | 1051 | 43.3 | Plus |
Dper\GL11343-PA | 617 | GL11343-PA | 63..590 | 5..530 | 816 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15647-PA | 597 | GA15647-PA | 45..594 | 6..553 | 1859 | 59.8 | Plus |
Dpse\GA24692-PA | 602 | GA24692-PA | 48..586 | 8..546 | 1564 | 50.3 | Plus |
Dpse\GA19206-PB | 632 | GA19206-PB | 73..610 | 8..543 | 1346 | 45 | Plus |
Dpse\GA19206-PC | 629 | GA19206-PC | 73..610 | 8..543 | 1344 | 45 | Plus |
Dpse\GA19206-PA | 625 | GA19206-PA | 73..610 | 8..543 | 1343 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20057-PA | 598 | GM20057-PA | 43..598 | 1..558 | 2862 | 95.9 | Plus |
Dsec\GM20056-PA | 610 | GM20056-PA | 58..597 | 8..546 | 1496 | 49.1 | Plus |
Dsec\GM10372-PA | 617 | GM10372-PA | 65..602 | 8..543 | 1361 | 45.6 | Plus |
Dsec\GM25984-PA | 759 | GM25984-PA | 226..757 | 8..537 | 1242 | 43.6 | Plus |
Dsec\GM20055-PA | 633 | GM20055-PA | 78..606 | 2..530 | 803 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25538-PA | 600 | GD25538-PA | 43..600 | 1..558 | 2861 | 95.3 | Plus |
Dsim\GD25537-PA | 610 | GD25537-PA | 58..597 | 8..546 | 1505 | 49.4 | Plus |
Dsim\Men-PA | 759 | GD20544-PA | 226..757 | 8..537 | 1245 | 43.6 | Plus |
Dsim\GD25536-PA | 627 | GD25536-PA | 72..600 | 2..530 | 806 | 31.7 | Plus |
Dsim\GD21330-PA | 244 | GD21330-PA | 65..233 | 8..177 | 420 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22862-PA | 623 | GJ22862-PA | 71..608 | 8..543 | 1356 | 44.8 | Plus |
Dvir\GJ19975-PA | 456 | GJ19975-PA | 1..452 | 102..551 | 1235 | 53 | Plus |
Dvir\GJ10817-PA | 816 | GJ10817-PA | 283..814 | 8..537 | 1224 | 43.4 | Plus |
Dvir\GJ19974-PA | 610 | GJ19974-PA | 53..582 | 3..529 | 697 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21603-PA | 801 | GK21603-PA | 261..796 | 8..543 | 1722 | 57.5 | Plus |
Dwil\GK11883-PA | 622 | GK11883-PA | 70..607 | 8..543 | 1355 | 45 | Plus |
Dwil\GK10867-PA | 842 | GK10867-PA | 309..840 | 8..537 | 1256 | 43.2 | Plus |
Dwil\GK21699-PA | 616 | GK21699-PA | 58..596 | 2..537 | 854 | 32.4 | Plus |
Dwil\GK21603-PA | 801 | GK21603-PA | 1..261 | 148..407 | 732 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14061-PA | 602 | GE14061-PA | 43..584 | 1..542 | 2659 | 90 | Plus |
Dyak\GE14060-PA | 609 | GE14060-PA | 59..609 | 9..558 | 1507 | 48.6 | Plus |
Dyak\GE23720-PA | 617 | GE23720-PA | 65..602 | 8..543 | 1360 | 45.6 | Plus |
Dyak\GE24490-PA | 768 | GE24490-PA | 235..766 | 8..537 | 1247 | 43.8 | Plus |
Dyak\GE14059-PA | 638 | GE14059-PA | 83..611 | 2..530 | 820 | 31.6 | Plus |
Translation from 184 to 1860
> AT04275.hyp MESTIRWGLAFTIKERQRLGIMGLMPCSVRSMDDQMNAALANFEARPTDI ARFTYLSAVHHRHRRLYYRFIKENIEKSLPIVYTPTVGDVVATYGLNFQQ AISLFISIHDKGHIRDLMHNWVDEGVKAICVTDGGRVLGLGDMGANAMGI SLGKMILYTALGSIPPSTLMPVCLDVGTDNQALLQDPLYVGARIPRVKGP EYDELVDEFMESAVKCFGNNTFIHFEDFATPNALKFLEKYQYKYCCFNDD IQGTGATGLAAFINVERITGRKLEDTVFLFVGAGSAALGIANMLAMELEV RGIPAEEATKNIYLMDVNGILTPESPNPPEMGKIFIKSMEPMKDMMAVLK KLKPSVLVGATGVGGIFNEEVLKTMAKNHERPAVFPLSNPTANSECTAEQ AFTHTEGRVLFGSGSPFPPVVINGKRYRPAQANNCLTFPGIALAAITAKA RYLPNEVFSVVSHELARNTPQELLDEGTLFPPIKDAHNVAFNVGVAMTQY LIDNDLSNVYPKPDDICEFVKRSLYKFDYRNSLPTTWDYPVEPPTPKPKT KPKTKPKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Menl-2-PD | 558 | CG7969-PD | 1..558 | 1..558 | 2931 | 100 | Plus |
Menl-2-PE | 600 | CG7969-PE | 50..600 | 8..558 | 2892 | 100 | Plus |
Menl-2-PA | 600 | CG7969-PA | 50..600 | 8..558 | 2892 | 100 | Plus |
Menl-1-PD | 610 | CG7964-PD | 59..597 | 9..546 | 1451 | 49 | Plus |
Men-b-PA | 617 | CG5889-PA | 65..602 | 8..543 | 1336 | 45.8 | Plus |