BDGP Sequence Production Resources |
Search the DGRC for AT04280
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 42 |
Well: | 80 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG31550-RC |
Protein status: | AT04280.pep: gold |
Preliminary Size: | 1279 |
Sequenced Size: | 2613 |
Gene | Date | Evidence |
---|---|---|
CG12167 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31550 | 2002-02-22 | Blastp of sequenced clone |
CG31550 | 2008-04-29 | Release 5.5 accounting |
CG31550 | 2008-08-15 | Release 5.9 accounting |
CG31550 | 2008-12-18 | 5.12 accounting |
2613 bp (2613 high quality bases) assembled on 2002-02-22
GenBank Submission: AY095508
> AT04280.complete CCTCGTGCCGGTGATGCGAAGACTTGGTATAATTCCAAGTATGTGAGTTG GTTACACTGTTGCTTTGCTGGAAAAGAAAATTGTGGAATAAAACGGAGTC TGCGGCATTGGGAATTATGTCACAGCGAAATCACAGAGTGGACCGCTTCG CCCAGATGACAAAGCAGGAGGAGATCATAGCCAAGAAACGGCAAGAGATC CTCGAGAAGCAGAAGACGGCACAGCTGGCGAAGGCGGTGGCCGCGGCGCA GAACTTGGCAGCGCAGCTGAAAACCGAGACGACTGTGGGAAAACCCATTG GCAACGAGGTGGAGTATGAGGAGGATGCCCGATACCTGGACACCGCCGTC CAGGACACCTCTCTAGCGGCCGGCGAGGATGGCCTGGAGGCTGTTCACAT TGAGGCCACGGCCAGCAAGGGAAAGACGGAGGACGCGGTGGCCCCCAAGA CGCTGAATAGCTTCACTGGCAAAACGGGCAAGATCACATTTGGCATGAAG CGTCAGCAGCTGCCTCAGCCCAGTGTTGAGCAGCCACCACCGAAGGTTAA AAACACTTTCTGCAACGATGGTTCCTTTTTAGAGAACTTCAAGAAAATAC TCGAAAAGCACGAAAAGCCTCCGCAGCCCTTGATTGTTCCGCCGGTTCCA GTGCCCAGCGCCGAGGAGAACAAAGCCGTGGACACGGAAACAGCAGAGCA GAACAACAGTCCCCAGCTAGAGGCGGCCATCGCCATAAGCTCGGCAGCAG CCATGGCTACCTCCATTACGGTGACCAGCTCGGCGCCAACTCATTTGGCT TTTGGACTACCCGTGCAAGCAGTGCAGCCACCACCGCCGCCTCCATTTGC ATTCAATCCTACGCTTTTGCAACAGGGACCACCGCAGATGCAGCTGCCAG CTGCATTCTTTCACGGCCATTTGCCTCTGCACTTGCATCCGGCGGCAGTT GCTCCTCCGCCACCTCCACCGCCTCCACAGCTGCCCATCGCTCTGACCAA CATGGGACAGATTTACATGCAGCTTGGTCCGTCTCCAGTGGAGGCTATGC AGCTGAATGCCATACCGGCGCCCAAAGAGTTTGACTTAAATGCCATACCT AAGCCACAAATAAATCTGGAGGCTATCCAGATGCCCAGCATCGGTGGTCA TTCGACGGAGCAGCTTGGCCTCCTGCCGGACCGCATGTCCATGCCAGTGA ATCCACACCCACCGCCTCCGCCGCCACCTGTAGTGGAGGAAATGGAGCAA CAGCGCCAGCAGGTGGCACCTCCACATCCACCTCAGCCCACAGCTGCGCC GCCACAAGGTTTCTTTATGATAAGAGCTGCGAGCAGTATCGAAGCTATAG CGACCAACTCCTCGACTACAAACAGCAGCGGGCTGAGCGACAACGGGAGC GGGAGCATCAGAAGCTAAGCCGGGACCATCAGCCGCAGGCGACGGAGCAG ACGGACGCACAGCAACACCGCGAGGAGCAGCACAGCAACTCGGCGGCTGA CAAGTACGACCCAGAGTCGGCCATCAGCGCGGACTTCGACTCGGATGACG AGTACATGCGGGGCATGATGGATCGCAACCGGGACAACATCAAGCGCCGC ATTGAGTGTCGCAACGAGCTGAGCGACGAGGAGAGGCGCGAACGGGAGGA GGCTGCATCCGGAGAACCGCCGGATGGCGATGACCAGGACGACCAAGACG ACAAGGAGTCGCAGAGGCAGCGTAGGAAGCGCGAGCGCAAGAGCCGATGG GGCGAGAAAGAGCAACAGTTGCCATCCTCAAGCACTTCGGGAAACTTTGG TAACCAAAATAAACCCATACTAAGTGGCATCACGCGAACAGATCCCGCGT TGTTGCAGTATGCTCGGCTCAACTATGGATCGACTCAGCTGAGCGAGGAG CAGTGGAAGCAGTGCGAGGAGCACTACAAAGTAAACCTGCTGTATCAGGA CATGATGCGCAAGCGTCAGGAAATCGATCGACTGGCCCGTGGCGGTAAAT TCAAGTACGAATACGACTCGGACGAGGACATTGAGGGCGGGACGTGGGAG CACAAGTTGCGAACAGCCGAAATGGAGGCCACATCCCTATGGGCAAACGC CCTGACCAAGCAAAGCGAAGGCAAGCATCACATCGGCGACTTTCTGCCCC CCGAGGAGCTCAAGAAGTTCATGGAGCAGTACGAGGCGAAGAAGAACAAC AGGCAGCCGGATCTAAGCGACTACAAGGAGTACAAACTAAAGGAGGACAA CATTGGCTTCCAAATGCTGCAAAAACTCGGCTGGAAAGAGGGGCAGGGCT TAGGACAGGACGGAGCTGGAATTGTGGACCCCGTTAACAAGGCACCGCAA CGCGATGGAAACCAAGGACTTGGTGTCAGCAGCGCTGCCCAGCCAGAGGA CTGCGACAATGAATATGACGCCTACAGGAAGCGAATGATGTTGGCCTATC GTTTTCGTCCAAATCCTTTGAACAATCCACGTCGCGCCTACTACTAGCAC TACCTAAAATGACCCCTACCCACATAACTACCAATATCCTAGGTCCACTT ATTCAACTGCAACTTTGCTGAATAAAATGTCCTCGTTTAAATTAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31550-RC | 2696 | CG31550-RC | 70..2656 | 10..2596 | 12920 | 99.9 | Plus |
CG31550.a | 2823 | CG31550.a | 70..1372 | 10..1312 | 6485 | 99.8 | Plus |
CG31550-RB | 2753 | CG31550-RB | 52..1350 | 10..1308 | 6480 | 99.9 | Plus |
CG31550.a | 2823 | CG31550.a | 1495..2783 | 1308..2596 | 6445 | 100 | Plus |
CG31550-RB | 2753 | CG31550-RB | 1468..2753 | 1308..2593 | 6430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1311892..1312545 | 657..1310 | 3255 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 1311191..1311839 | 10..658 | 3245 | 100 | Plus |
chr3R | 27901430 | chr3R | 1314191..1314750 | 1782..2341 | 2800 | 100 | Plus |
chr3R | 27901430 | chr3R | 1313492..1313967 | 1307..1782 | 2380 | 100 | Plus |
chr3R | 27901430 | chr3R | 1314798..1314932 | 2336..2470 | 660 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 1315025..1315148 | 2470..2593 | 620 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5486233..5486886 | 657..1310 | 3255 | 99.8 | Plus |
3R | 32079331 | 3R | 5485532..5486180 | 10..658 | 3245 | 100 | Plus |
3R | 32079331 | 3R | 5488532..5489091 | 1782..2341 | 2800 | 100 | Plus |
3R | 32079331 | 3R | 5487833..5488308 | 1307..1782 | 2380 | 100 | Plus |
3R | 32079331 | 3R | 5489139..5489273 | 2336..2470 | 660 | 99.3 | Plus |
3R | 32079331 | 3R | 5489366..5489492 | 2470..2596 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5227064..5227717 | 657..1310 | 3255 | 99.8 | Plus |
3R | 31820162 | 3R | 5226363..5227011 | 10..658 | 3245 | 100 | Plus |
3R | 31820162 | 3R | 5229363..5229922 | 1782..2341 | 2800 | 100 | Plus |
3R | 31820162 | 3R | 5228664..5229139 | 1307..1782 | 2380 | 100 | Plus |
3R | 31820162 | 3R | 5229970..5230104 | 2336..2470 | 660 | 99.2 | Plus |
3R | 31820162 | 3R | 5230197..5230323 | 2470..2596 | 635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1315026..1315148 | 2471..2593 | 100 | Plus | |
chr3R | 1311191..1311839 | 10..658 | 100 | -> | Plus |
chr3R | 1311894..1312543 | 659..1308 | 99 | -> | Plus |
chr3R | 1313494..1313966 | 1309..1781 | 100 | -> | Plus |
chr3R | 1314191..1314749 | 1782..2340 | 100 | -> | Plus |
chr3R | 1314803..1314932 | 2341..2470 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..1302 | 117..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..1302 | 117..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..1302 | 117..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..1302 | 117..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..1302 | 117..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..2584 | 10..2593 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..2584 | 10..2593 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..2573 | 21..2593 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..2584 | 10..2593 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31550-RC | 1..2573 | 21..2593 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5489367..5489489 | 2471..2593 | 100 | Plus | |
3R | 5485532..5486180 | 10..658 | 100 | -> | Plus |
3R | 5486235..5486884 | 659..1308 | 99 | -> | Plus |
3R | 5487835..5488307 | 1309..1781 | 100 | -> | Plus |
3R | 5488532..5489090 | 1782..2340 | 100 | -> | Plus |
3R | 5489144..5489273 | 2341..2470 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5489367..5489489 | 2471..2593 | 100 | Plus | |
3R | 5485532..5486180 | 10..658 | 100 | -> | Plus |
3R | 5486235..5486884 | 659..1308 | 99 | -> | Plus |
3R | 5487835..5488307 | 1309..1781 | 100 | -> | Plus |
3R | 5488532..5489090 | 1782..2340 | 100 | -> | Plus |
3R | 5489144..5489273 | 2341..2470 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5489367..5489489 | 2471..2593 | 100 | Plus | |
3R | 5485532..5486180 | 10..658 | 100 | -> | Plus |
3R | 5486235..5486884 | 659..1308 | 99 | -> | Plus |
3R | 5487835..5488307 | 1309..1781 | 100 | -> | Plus |
3R | 5488532..5489090 | 1782..2340 | 100 | -> | Plus |
3R | 5489144..5489273 | 2341..2470 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1315089..1315211 | 2471..2593 | 100 | Plus | |
arm_3R | 1311254..1311902 | 10..658 | 100 | -> | Plus |
arm_3R | 1311957..1312606 | 659..1308 | 99 | -> | Plus |
arm_3R | 1313557..1314029 | 1309..1781 | 100 | -> | Plus |
arm_3R | 1314254..1314812 | 1782..2340 | 100 | -> | Plus |
arm_3R | 1314866..1314995 | 2341..2470 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5226363..5227011 | 10..658 | 100 | -> | Plus |
3R | 5227066..5227715 | 659..1308 | 99 | -> | Plus |
3R | 5228666..5229138 | 1309..1781 | 100 | -> | Plus |
3R | 5229363..5229921 | 1782..2340 | 100 | -> | Plus |
3R | 5229975..5230104 | 2341..2470 | 100 | -> | Plus |
3R | 5230198..5230320 | 2471..2593 | 100 | Plus |
Translation from 116 to 1417
> AT04280.hyp MSQRNHRVDRFAQMTKQEEIIAKKRQEILEKQKTAQLAKAVAAAQNLAAQ LKTETTVGKPIGNEVEYEEDARYLDTAVQDTSLAAGEDGLEAVHIEATAS KGKTEDAVAPKTLNSFTGKTGKITFGMKRQQLPQPSVEQPPPKVKNTFCN DGSFLENFKKILEKHEKPPQPLIVPPVPVPSAEENKAVDTETAEQNNSPQ LEAAIAISSAAAMATSITVTSSAPTHLAFGLPVQAVQPPPPPPFAFNPTL LQQGPPQMQLPAAFFHGHLPLHLHPAAVAPPPPPPPPQLPIALTNMGQIY MQLGPSPVEAMQLNAIPAPKEFDLNAIPKPQINLEAIQMPSIGGHSTEQL GLLPDRMSMPVNPHPPPPPPPVVEEMEQQRQQVAPPHPPQPTAAPPQGFF MIRAASSIEAIATNSSTTNSSGLSDNGSGSIRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31550-PC | 433 | CG31550-PC | 1..433 | 1..433 | 2244 | 100 | Plus |
CG31550-PD | 835 | CG31550-PD | 1..399 | 1..399 | 2076 | 99.7 | Plus |
CG31550-PB | 832 | CG31550-PB | 1..397 | 1..397 | 2073 | 100 | Plus |
dalao-PA | 749 | CG7055-PA | 317..679 | 19..396 | 166 | 25.7 | Plus |
Translation from 116 to 1417
> AT04280.pep MSQRNHRVDRFAQMTKQEEIIAKKRQEILEKQKTAQLAKAVAAAQNLAAQ LKTETTVGKPIGNEVEYEEDARYLDTAVQDTSLAAGEDGLEAVHIEATAS KGKTEDAVAPKTLNSFTGKTGKITFGMKRQQLPQPSVEQPPPKVKNTFCN DGSFLENFKKILEKHEKPPQPLIVPPVPVPSAEENKAVDTETAEQNNSPQ LEAAIAISSAAAMATSITVTSSAPTHLAFGLPVQAVQPPPPPPFAFNPTL LQQGPPQMQLPAAFFHGHLPLHLHPAAVAPPPPPPPPQLPIALTNMGQIY MQLGPSPVEAMQLNAIPAPKEFDLNAIPKPQINLEAIQMPSIGGHSTEQL GLLPDRMSMPVNPHPPPPPPPVVEEMEQQRQQVAPPHPPQPTAAPPQGFF MIRAASSIEAIATNSSTTNSSGLSDNGSGSIRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17256-PA | 839 | GF17256-PA | 1..360 | 1..364 | 1018 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12860-PA | 831 | GG12860-PA | 1..398 | 1..397 | 1436 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18599-PA | 912 | GH18599-PA | 119..403 | 97..359 | 672 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31550-PC | 433 | CG31550-PC | 1..433 | 1..433 | 2244 | 100 | Plus |
CG31550-PD | 835 | CG31550-PD | 1..399 | 1..399 | 2076 | 99.7 | Plus |
CG31550-PE | 440 | CG31550-PE | 1..399 | 1..399 | 2076 | 99.7 | Plus |
CG31550-PB | 832 | CG31550-PB | 1..397 | 1..397 | 2073 | 100 | Plus |
Bap111-PA | 749 | CG7055-PA | 317..679 | 19..396 | 166 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23081-PA | 806 | GI23081-PA | 1..378 | 1..358 | 822 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21667-PA | 871 | GL21667-PA | 1..373 | 1..364 | 958 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30091-PB | 465 | GA30091-PB | 1..450 | 1..423 | 1027 | 62.5 | Plus |
Dpse\GA30091-PA | 869 | GA30091-PA | 1..373 | 1..364 | 983 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10812-PA | 834 | GM10812-PA | 1..386 | 1..384 | 1398 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19790-PA | 834 | GD19790-PA | 1..386 | 1..384 | 1439 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22701-PA | 870 | GJ22701-PA | 1..386 | 1..359 | 826 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13253-PA | 854 | GK13253-PA | 1..414 | 1..393 | 750 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25473-PA | 825 | GE25473-PA | 1..397 | 1..397 | 1391 | 86.5 | Plus |