AT04449.complete Sequence
875 bp (875 high quality bases) assembled on 2002-01-16
GenBank Submission: AY084097
> AT04449.complete
TTTATATTAAGACATGCACACCGGAAAATGTCTGGTAGCATGGATAATTG
TATCTTTATGCTATATAGGACTAGGTGGCGCGTTGAAGGACCTAAAGGAG
GGAAAGATAGCAGAGCCTCTATGCTCAAACTGCAATAAAATTCAGCGCAA
ATGTACCGTCTCCCATTCTGGCCTATTTTGTAAAAATAAAACGGATAAAG
AGAAGATATTGTTTTCACACAGCTTAGCGGAAAAATTGTACAATTTGGAT
GAGTGTGTTCCACACAAGTACAACGTTACGGGTCCGATTTTGGACTGGTG
CTGTCTGTGGTCACCAAAATTGGGCTGCCAGCAATTGGCCGGAATCTACT
ACCAAAACCAATCGCGCTGGAGGGACACCTGCGAAATTTGTCTGCACTCC
TGCATCTGCGATGAGGATACAAACGGGGTGGTCAAGTGCTCTCCCACGGC
TGGCTGCCTGGCTGCCCTGGGCATTCTGGGCATCCTGCTGTCGAGGTCTT
ATCTATGGTCTTGAGATGCGCTGCTTTGCATATCACTGGAAATTCAATAA
GGTTGCCTGCATGGGGGAATTCCGAGTGGCCGGGCACATACCGAAAAACA
AAGTGGCCATTGCACTTAGCCAAGTCGAATACAAATCAAGGCAACAATGG
GTCTGCCACTGTCCCCCAGCGACACGGGGCACATGACTCTGGCCAAAAGG
GGAGCCGTGGCATATCATATTGTTTCTGTTGATTTTATTCGGAATATGCG
ATAGTGGGGAGAGATATTCATAAGTCGAAAACCAATAGTGGCTTTTCAAA
AAAAAAACATTGTTAATTAAAAGCAGACCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
AT04449.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:29:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31128-RA | 981 | CG31128-RA | 66..900 | 1..835 | 4175 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:24:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 20293028..20293576 | 281..829 | 2745 | 100 | Plus |
chr3R | 27901430 | chr3R | 20292694..20292976 | 1..283 | 1415 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:39:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24469762..24470316 | 281..835 | 2775 | 100 | Plus |
3R | 32079331 | 3R | 24469428..24469710 | 1..283 | 1415 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:58:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 24210593..24211147 | 281..835 | 2775 | 100 | Plus |
3R | 31820162 | 3R | 24210259..24210541 | 1..283 | 1415 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 23:24:55 has no hits.
AT04449.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:26:05 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 20292694..20292974 | 1..281 | 100 | -> | Plus |
chr3R | 20293029..20293576 | 282..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:51:53 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 1..501 | 14..514 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:48:11 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 1..501 | 14..514 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:41:00 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 1..501 | 14..514 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:15:43 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 1..501 | 14..514 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:33:19 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 1..501 | 14..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:12:13 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 32..860 | 1..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:48:11 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 32..860 | 1..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:41:00 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 32..860 | 1..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:15:43 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 32..860 | 1..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:33:19 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31128-RA | 32..860 | 1..829 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:26:05 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24469428..24469708 | 1..281 | 100 | -> | Plus |
3R | 24469763..24470310 | 282..829 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:26:05 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24469428..24469708 | 1..281 | 100 | -> | Plus |
3R | 24469763..24470310 | 282..829 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:26:05 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24469428..24469708 | 1..281 | 100 | -> | Plus |
3R | 24469763..24470310 | 282..829 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:41:00 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20295150..20295430 | 1..281 | 100 | -> | Plus |
arm_3R | 20295485..20296032 | 282..829 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:49:34 Download gff for
AT04449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24210259..24210539 | 1..281 | 100 | -> | Plus |
3R | 24210594..24211141 | 282..829 | 100 | | Plus |
AT04449.pep Sequence
Translation from 13 to 513
> AT04449.pep
MHTGKCLVAWIIVSLCYIGLGGALKDLKEGKIAEPLCSNCNKIQRKCTVS
HSGLFCKNKTDKEKILFSHSLAEKLYNLDECVPHKYNVTGPILDWCCLWS
PKLGCQQLAGIYYQNQSRWRDTCEICLHSCICDEDTNGVVKCSPTAGCLA
ALGILGILLSRSYLWS*
AT04449.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:34:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19746-PA | 154 | GF19746-PA | 5..129 | 12..135 | 284 | 43.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:34:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11294-PA | 165 | GG11294-PA | 1..165 | 1..166 | 607 | 72.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31128-PA | 166 | CG31128-PA | 1..166 | 1..166 | 928 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:34:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16030-PB | 168 | GA16030-PB | 26..138 | 24..137 | 277 | 46.1 | Plus |
Dpse\GA30026-PA | 167 | GA30026-PA | 25..161 | 24..159 | 221 | 36.2 | Plus |
Dpse\GA30027-PA | 158 | GA30027-PA | 22..133 | 27..132 | 199 | 36.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:35:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26600-PA | 166 | GM26600-PA | 1..166 | 1..166 | 779 | 89.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:35:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21102-PA | 166 | GD21102-PA | 1..166 | 1..166 | 788 | 91 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:35:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23488-PA | 167 | GE23488-PA | 1..164 | 1..163 | 596 | 72.1 | Plus |
AT04449.hyp Sequence
Translation from 13 to 513
> AT04449.hyp
MHTGKCLVAWIIVSLCYIGLGGALKDLKEGKIAEPLCSNCNKIQRKCTVS
HSGLFCKNKTDKEKILFSHSLAEKLYNLDECVPHKYNVTGPILDWCCLWS
PKLGCQQLAGIYYQNQSRWRDTCEICLHSCICDEDTNGVVKCSPTAGCLA
ALGILGILLSRSYLWS*
AT04449.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31128-PA | 166 | CG31128-PA | 1..166 | 1..166 | 928 | 100 | Plus |