BDGP Sequence Production Resources |
Search the DGRC for AT04454
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 44 |
Well: | 54 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG11710-RA |
Protein status: | AT04454.pep: gold |
Preliminary Size: | 1542 |
Sequenced Size: | 1724 |
Gene | Date | Evidence |
---|---|---|
CG11710 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11710 | 2002-01-09 | Blastp of sequenced clone |
CG11710 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11710 | 2008-04-29 | Release 5.5 accounting |
CG11710 | 2008-08-15 | Release 5.9 accounting |
CG11710 | 2008-12-18 | 5.12 accounting |
1724 bp (1724 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075162
> AT04454.complete AAGCAGTTGGCAAACTTTGGGACTGCGAAATGGAGAATTTCCTGCGGGGC ACGTTGTCCAAATGTCTGGACTGTGTAATCACGGATCAGATGTTGGCGGC CATACTGAACATCAAAGACGACTATGAATTCGACAACTACTTTGGCAATT TACTGAGCGAGGACAACGAGGAGCACCGCATGTTTCTTGTAAACTGTCGC CGGATGCTACTGAGTGGCAAACAGCCGCGGAACAATGGAAAATATCTCTC GCCCCCTCTGGCACCCACATCACCCAATTGTCCCAAGCAAAATATCAGCA AGGGTGCCAAGGGCAAGTCAGGGAAACACGTGAATCTGTACGCCAGCGAT GGTCGCGTCCAGGGCGACACCATAATTCTTAAGGGTCGGCGGCATTGCGA TTGCCAGGCGGGCCAGCACAAGTTGATCAACAATTGCCTGGGCTGCGGCC GGATCGTGTGCGAGCAGGAGGGAAGCGGCCCTTGCTTGAGCTGCGGCGAT CCCGTGCGCACGCCCGAGGAGGAGCAGCAGCTGGCCAAGGCGGCCAGGGA GAAGGGCGGCACGAAGAGCGCCGCCAAGCAGGGCAAAAAATCCACCAAGG AACTGTCCACGCAGGCGCTGGACAAGGCCTTGGCCCAAAGGGATCGTCTG CTGGAGTACGACAAGAACAGCGAGAAGAGGACCACAGTTATCGACGATGA GCTGGACTACTTTCAGGAGAACTCCGTGTGGCTGAGCGACGCTGAGCGCG AAAAGTTTGAGAAACTGCACCGAGAAATGGAGGAGGTAAAGCACGGCAGT CGCATGAAGCGGAAGATCCGGGTGGACTTCGCTGGCCGAGAGTTGCCGGA GGAACCGACCATCTCCAAAGAGTACGAGCAGCAGGTGATCAGCGAACTAG CAGCCGTTTCTAAAGCCTCGGGTGTTGGATCCAACTGGAGTGCATCCTCG GTCACCGGCCACTCCGCCTTGACACTGGCACCACATTTGAACATGACCAA GCCGCCGGTCTACAAGCCCAGTAAGGAATCCAAGAGTTGGCCAGCTCCTG CAGCAGGCAGCGATTGGCTGGAGAGGACCTACAATCGGGTGCAGGACAAG GAGCTGCTGGAAATGCAGGACATGCGCCAGTGTCTGTCGATGCATCAGCC CTGGGCTTCGCTTCTAGTGGCGGGCATTAAGAAACACGAGGGTCGAGTGT GGTACAGCGAGCACCGTGGTAGACTGTGGATCGCCTCCACTTCCAAGGAG CCGCACGCCGAAGACATTGCGCAAATGGAGGGCTTTTACAAGATCCCGAC ATTAAGTTTCCAAGTCATTATCCCACAAGCAGTCTGCTAGGCTGCGTCCA CGTGGACAGTTGTCTGCCGCAAGAGGAGTACCGAGAGCTATATCCCAACG GAGAATCGGAGAGTCCTTATGTCTTTGTCTGCACCAAGCCGGAGCAGCTG AATATTCTACTGCCCGTCCACGGCGATCACAAGATATACGAGCTGCCACT GAAAACTCACACGGCCGCCTGCAAAACGCTTCTAAGGGCTCGGGCCAACA AGGGTTAAGGTTGGGATTCAGTTTCAAAACACATTCTTATTAGTTTAATG CCTGTATGAAAACAGCCCTATTTTGATGATTTGCTAATTTACATTTGAAG CTCCTAGAGTTTCTGAGAAATTAAAGTGGATTGGAATATTTTAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11710-RA | 1931 | CG11710-RA | 116..1810 | 1..1695 | 8475 | 100 | Plus |
CG11710-RB | 1907 | CG11710-RB | 79..1370 | 1..1292 | 6460 | 100 | Plus |
CG11710-RB | 1907 | CG11710-RB | 1383..1786 | 1292..1695 | 2020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20294328..20294947 | 717..98 | 3100 | 100 | Minus |
chrX | 22417052 | chrX | 20293743..20294215 | 1183..711 | 2350 | 99.8 | Minus |
chrX | 22417052 | chrX | 20293045..20293249 | 1692..1488 | 1025 | 100 | Minus |
chrX | 22417052 | chrX | 20293310..20293506 | 1487..1291 | 985 | 100 | Minus |
chrX | 22417052 | chrX | 20293574..20293682 | 1292..1184 | 545 | 100 | Minus |
chrX | 22417052 | chrX | 20295012..20295109 | 98..1 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20428818..20429437 | 717..98 | 3100 | 100 | Minus |
X | 23542271 | X | 20428233..20428705 | 1183..711 | 2350 | 99.8 | Minus |
X | 23542271 | X | 20427532..20427739 | 1695..1488 | 1040 | 100 | Minus |
X | 23542271 | X | 20427800..20427996 | 1487..1291 | 985 | 100 | Minus |
X | 23542271 | X | 20428064..20428172 | 1292..1184 | 545 | 100 | Minus |
X | 23542271 | X | 20429502..20429599 | 98..1 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20413910..20414529 | 717..98 | 3100 | 100 | Minus |
X | 23527363 | X | 20413325..20413797 | 1183..711 | 2350 | 99.7 | Minus |
X | 23527363 | X | 20412624..20412831 | 1695..1488 | 1040 | 100 | Minus |
X | 23527363 | X | 20412892..20413088 | 1487..1291 | 985 | 100 | Minus |
X | 23527363 | X | 20413156..20413264 | 1292..1184 | 545 | 100 | Minus |
X | 23527363 | X | 20414594..20414691 | 98..1 | 490 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20293045..20293249 | 1488..1692 | 100 | <- | Minus |
chrX | 20293310..20293504 | 1293..1487 | 100 | <- | Minus |
chrX | 20293574..20293682 | 1184..1292 | 100 | <- | Minus |
chrX | 20293743..20294209 | 717..1183 | 100 | <- | Minus |
chrX | 20294329..20294947 | 98..716 | 100 | <- | Minus |
chrX | 20295013..20295109 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1311 | 30..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1311 | 30..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RB | 1..1542 | 30..1558 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1311 | 30..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RB | 1..1542 | 30..1558 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1692 | 1..1692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1692 | 1..1692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 75..1766 | 1..1692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 1..1692 | 1..1692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11710-RA | 75..1766 | 1..1692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20427535..20427739 | 1488..1692 | 100 | <- | Minus |
X | 20427800..20427994 | 1293..1487 | 100 | <- | Minus |
X | 20428064..20428172 | 1184..1292 | 100 | <- | Minus |
X | 20428233..20428699 | 717..1183 | 100 | <- | Minus |
X | 20428819..20429437 | 98..716 | 100 | <- | Minus |
X | 20429503..20429599 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20427535..20427739 | 1488..1692 | 100 | <- | Minus |
X | 20427800..20427994 | 1293..1487 | 100 | <- | Minus |
X | 20428064..20428172 | 1184..1292 | 100 | <- | Minus |
X | 20428233..20428699 | 717..1183 | 100 | <- | Minus |
X | 20428819..20429437 | 98..716 | 100 | <- | Minus |
X | 20429503..20429599 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20427535..20427739 | 1488..1692 | 100 | <- | Minus |
X | 20427800..20427994 | 1293..1487 | 100 | <- | Minus |
X | 20428064..20428172 | 1184..1292 | 100 | <- | Minus |
X | 20428233..20428699 | 717..1183 | 100 | <- | Minus |
X | 20428819..20429437 | 98..716 | 100 | <- | Minus |
X | 20429503..20429599 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20298827..20299021 | 1293..1487 | 100 | <- | Minus |
arm_X | 20299091..20299199 | 1184..1292 | 100 | <- | Minus |
arm_X | 20298562..20298766 | 1488..1692 | 100 | <- | Minus |
arm_X | 20299260..20299726 | 717..1183 | 100 | <- | Minus |
arm_X | 20299846..20300464 | 98..716 | 100 | <- | Minus |
arm_X | 20300530..20300626 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20413325..20413791 | 717..1183 | 100 | <- | Minus |
X | 20413911..20414529 | 98..716 | 100 | <- | Minus |
X | 20414595..20414691 | 1..97 | 100 | Minus | |
X | 20412627..20412831 | 1488..1692 | 100 | <- | Minus |
X | 20412892..20413086 | 1293..1487 | 100 | <- | Minus |
X | 20413156..20413264 | 1184..1292 | 100 | <- | Minus |
Translation from 2 to 1339
> AT04454.hyp AVGKLWDCEMENFLRGTLSKCLDCVITDQMLAAILNIKDDYEFDNYFGNL LSEDNEEHRMFLVNCRRMLLSGKQPRNNGKYLSPPLAPTSPNCPKQNISK GAKGKSGKHVNLYASDGRVQGDTIILKGRRHCDCQAGQHKLINNCLGCGR IVCEQEGSGPCLSCGDPVRTPEEEQQLAKAAREKGGTKSAAKQGKKSTKE LSTQALDKALAQRDRLLEYDKNSEKRTTVIDDELDYFQENSVWLSDAERE KFEKLHREMEEVKHGSRMKRKIRVDFAGRELPEEPTISKEYEQQVISELA AVSKASGVGSNWSASSVTGHSALTLAPHLNMTKPPVYKPSKESKSWPAPA AGSDWLERTYNRVQDKELLEMQDMRQCLSMHQPWASLLVAGIKKHEGRVW YSEHRGRLWIASTSKEPHAEDIAQMEGFYKIPTLSFQVIIPQAVC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11710-PA | 436 | CG11710-PA | 1..436 | 10..445 | 2308 | 100 | Plus |
CG11710-PC | 513 | CG11710-PC | 1..422 | 10..431 | 2235 | 99.8 | Plus |
CG11710-PB | 513 | CG11710-PB | 1..422 | 10..431 | 2235 | 99.8 | Plus |
Translation from 29 to 1339
> AT04454.pep MENFLRGTLSKCLDCVITDQMLAAILNIKDDYEFDNYFGNLLSEDNEEHR MFLVNCRRMLLSGKQPRNNGKYLSPPLAPTSPNCPKQNISKGAKGKSGKH VNLYASDGRVQGDTIILKGRRHCDCQAGQHKLINNCLGCGRIVCEQEGSG PCLSCGDPVRTPEEEQQLAKAAREKGGTKSAAKQGKKSTKELSTQALDKA LAQRDRLLEYDKNSEKRTTVIDDELDYFQENSVWLSDAEREKFEKLHREM EEVKHGSRMKRKIRVDFAGRELPEEPTISKEYEQQVISELAAVSKASGVG SNWSASSVTGHSALTLAPHLNMTKPPVYKPSKESKSWPAPAAGSDWLERT YNRVQDKELLEMQDMRQCLSMHQPWASLLVAGIKKHEGRVWYSEHRGRLW IASTSKEPHAEDIAQMEGFYKIPTLSFQVIIPQAVC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22312-PA | 514 | GF22312-PA | 1..439 | 1..434 | 1836 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17582-PA | 520 | GG17582-PA | 1..445 | 1..434 | 2016 | 85.8 | Plus |
Dere\GG17583-PA | 967 | GG17583-PA | 1..129 | 1..126 | 523 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17728-PA | 510 | GH17728-PA | 1..418 | 1..421 | 1407 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11710-PA | 436 | CG11710-PA | 1..436 | 1..436 | 2308 | 100 | Plus |
CG11710-PC | 513 | CG11710-PC | 1..422 | 1..422 | 2235 | 99.8 | Plus |
CG11710-PB | 513 | CG11710-PB | 1..422 | 1..422 | 2235 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15476-PA | 514 | GI15476-PA | 1..422 | 1..421 | 1519 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15791-PA | 430 | GL15791-PA | 112..348 | 193..427 | 896 | 73.3 | Plus |
Dper\GL15791-PA | 430 | GL15791-PA | 1..75 | 1..75 | 318 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11154-PA | 532 | GA11154-PA | 1..450 | 1..427 | 1499 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22668-PA | 513 | GM22668-PA | 1..438 | 1..434 | 2157 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24442-PA | 508 | GD24442-PA | 1..424 | 1..424 | 2156 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19188-PA | 513 | GJ19188-PA | 1..422 | 1..422 | 1573 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25493-PA | 488 | GK25493-PA | 1..409 | 1..434 | 1265 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15346-PA | 520 | GE15346-PA | 1..445 | 1..434 | 2025 | 86.7 | Plus |