BDGP Sequence Production Resources |
Search the DGRC for AT04468
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 44 |
Well: | 68 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5250-RA |
Protein status: | AT04468.pep: gold |
Preliminary Size: | 936 |
Sequenced Size: | 1078 |
Gene | Date | Evidence |
---|---|---|
CG5250 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5250 | 2002-02-26 | Blastp of sequenced clone |
CG5250 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5250 | 2008-04-29 | Release 5.5 accounting |
CG5250 | 2008-08-15 | Release 5.9 accounting |
CG5250 | 2008-12-18 | 5.12 accounting |
1078 bp (1078 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089258
> AT04468.complete CTCATATATTTCCATAAGATATAATTAAGGACCCATATATTATTATTCCA TGCCTAACGACGCGATAATCTATTCTGGTCCCTACGAATTGGGACGCCTT CGCCGGCGTCGTGATATGCGGGTGGCGGAGTACCTCTACAGGCGTTCCAT TCGCACACGCAATGCGGATCCCGAGATGACCGTGTGCCGTTTTATCAAAC TGCTGCTCTACTTCATCGGATTCTTTTTCGTTCTAGGCGTATTCACAACC GGATTGGCCCTCGTGATGATTGCGAATCATATATATCCGGATAGGCCGGG ATGCAAAAAGTTCCCCGGACTAGCAACCGCGCCCGGACACCATGTCGGCG ATCAGAAGCAAATTATGTGGAGCCCTAATAACATTAAGGATGTGGCTAAC ATACAACGCGCGATAATGCGAACGGTGAAACGATACGGTCTCGAAGGCCC GAAGCGCCTGATGGGCTGTAACATAGACGACAGTTGGGGCTATATGTCCG GCACGCCGTGCATTCTAATAAAGATCACCCAGGCATTGGGCTTCCAGGCG GTAACCTACGATGACGCCCTAACGCTGCCCGAGTACGCTCCGGATGAGCT ATTCGACTATGTGGTGGGCCTGGGCTCGGAGGAGCGCTTCAACCGCATCT GGGTGTCCTGCCAGGTTATTGAGCCAAGAGTGGACATTCAGTTCGACTAC CATCCGGTTCGCTTCTTCGATGCCGAAGAGCTCTTCACCTCCGGCAATGT CTTTCTCAACGAGTCTTCGGACGACGACGGACCTACTTACAAGGAGGATC CCCGCCTCAGGCGCATCATCAGTGTTCGGTTGAGCAACATTCCGATCAAC GAGGACATCCAAATCCACTGCAAGGCGTGGGCTAAGAACATACCGCTCCA TATGGTAACGGTCAAGATGCTGGTGCGTCTGACGGCACCAGTTCATCCAA CCACTCCATTGGTGCTGGACGAGTGGTACGAGTGAGATCAGCTAACTCAG CTGGATTTATTAATGTATTAATAAATACTTAACAAAATAATAAAACTATT TGAGAATTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5250-RA | 1060 | CG5250-RA | 1..1060 | 1..1060 | 5210 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15052155..15053214 | 1060..1 | 5210 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19228216..19229276 | 1061..1 | 5215 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18969047..18970107 | 1061..1 | 5215 | 99.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15052155..15053214 | 1..1060 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..936 | 50..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..936 | 50..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..936 | 50..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..936 | 50..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..936 | 50..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..1014 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..1060 | 1..1060 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..1060 | 1..1060 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..1014 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5250-RA | 1..1060 | 1..1060 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19228217..19229276 | 1..1060 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19228217..19229276 | 1..1060 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19228217..19229276 | 1..1060 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15053939..15054998 | 1..1060 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18969048..18970107 | 1..1060 | 99 | Minus |
Translation from 49 to 984
> AT04468.pep MPNDAIIYSGPYELGRLRRRRDMRVAEYLYRRSIRTRNADPEMTVCRFIK LLLYFIGFFFVLGVFTTGLALVMIANHIYPDRPGCKKFPGLATAPGHHVG DQKQIMWSPNNIKDVANIQRAIMRTVKRYGLEGPKRLMGCNIDDSWGYMS GTPCILIKITQALGFQAVTYDDALTLPEYAPDELFDYVVGLGSEERFNRI WVSCQVIEPRVDIQFDYHPVRFFDAEELFTSGNVFLNESSDDDGPTYKED PRLRRIISVRLSNIPINEDIQIHCKAWAKNIPLHMVTVKMLVRLTAPVHP TTPLVLDEWYE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18470-PA | 313 | GF18470-PA | 1..303 | 1..302 | 855 | 54.5 | Plus |
Dana\GF18471-PA | 386 | GF18471-PA | 1..261 | 1..285 | 232 | 24.5 | Plus |
Dana\GF18472-PA | 378 | GF18472-PA | 1..262 | 1..283 | 221 | 26.8 | Plus |
Dana\GF14480-PA | 309 | GF14480-PA | 164..289 | 139..281 | 147 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16097-PA | 311 | GG16097-PA | 1..311 | 1..311 | 1217 | 74.9 | Plus |
Dere\GG16108-PA | 345 | GG16108-PA | 1..260 | 1..283 | 236 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22396-PA | 310 | GH22396-PA | 1..297 | 1..296 | 495 | 30.6 | Plus |
Dgri\GH22397-PA | 277 | GH22397-PA | 1..260 | 1..283 | 225 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5250-PA | 311 | CG5250-PA | 1..311 | 1..311 | 1665 | 100 | Plus |
CG11703-PA | 353 | CG11703-PA | 1..260 | 1..283 | 191 | 23.4 | Plus |
CG33310-PB | 876 | CG33310-PB | 659..841 | 103..281 | 187 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24482-PA | 315 | GI24482-PA | 1..295 | 1..294 | 483 | 32.9 | Plus |
Dmoj\GI16930-PA | 276 | GI16930-PA | 95..255 | 83..281 | 254 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11975-PA | 275 | GL11975-PA | 1..256 | 45..297 | 482 | 36.3 | Plus |
Dper\GL11976-PA | 625 | GL11976-PA | 90..260 | 85..283 | 210 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18763-PA | 275 | GA18763-PA | 1..256 | 45..297 | 480 | 36.3 | Plus |
Dpse\GA11151-PA | 623 | GA11151-PA | 91..260 | 86..283 | 212 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26919-PA | 311 | GM26919-PA | 1..311 | 1..311 | 1553 | 95.5 | Plus |
Dsec\GM26920-PA | 347 | GM26920-PA | 1..260 | 1..283 | 211 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20124-PA | 311 | GD20124-PA | 1..311 | 1..311 | 1546 | 94.9 | Plus |
Dsim\GD20125-PA | 347 | GD20125-PA | 1..260 | 1..283 | 210 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24547-PA | 317 | GJ24547-PA | 1..295 | 1..294 | 518 | 33.9 | Plus |
Dvir\GJ17105-PA | 274 | GJ17105-PA | 91..257 | 86..285 | 200 | 28 | Plus |
Translation from 49 to 984
> AT04468.hyp MPNDAIIYSGPYELGRLRRRRDMRVAEYLYRRSIRTRNADPEMTVCRFIK LLLYFIGFFFVLGVFTTGLALVMIANHIYPDRPGCKKFPGLATAPGHHVG DQKQIMWSPNNIKDVANIQRAIMRTVKRYGLEGPKRLMGCNIDDSWGYMS GTPCILIKITQALGFQAVTYDDALTLPEYAPDELFDYVVGLGSEERFNRI WVSCQVIEPRVDIQFDYHPVRFFDAEELFTSGNVFLNESSDDDGPTYKED PRLRRIISVRLSNIPINEDIQIHCKAWAKNIPLHMVTVKMLVRLTAPVHP TTPLVLDEWYE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5250-PA | 311 | CG5250-PA | 1..311 | 1..311 | 1665 | 100 | Plus |
CG11703-PA | 353 | CG11703-PA | 1..260 | 1..283 | 191 | 23.4 | Plus |
CG33310-PB | 876 | CG33310-PB | 659..841 | 103..281 | 187 | 25.3 | Plus |