BDGP Sequence Production Resources |
Search the DGRC for AT04676
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 46 |
Well: | 76 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG1640-RB |
Protein status: | AT04676.pep: gold |
Sequenced Size: | 1998 |
Gene | Date | Evidence |
---|---|---|
CG1640 | 2008-04-29 | Release 5.5 accounting |
CG1640 | 2008-04-29 | Picked prior to 5.5 |
CG1640 | 2008-08-15 | Release 5.9 accounting |
CG1640 | 2008-12-18 | 5.12 accounting |
1998 bp assembled on 2007-11-15
GenBank Submission: BT031172
> AT04676.complete ATTTTCGGGCCAGGATTGAATCGACACAAAACTAATTCAATGGGACACTC CTATAACAATCAATTTCAGTGATATATGAAGATGCGCACAAAGCCAGCAA AATTGTTTAAGTGAATTTAAAGTTTTACACGAAAAACAAGCAAAGAGCAA AGATGTTTAAAAACAGAAAAATAATGAGTCGAATGCTAATTAAACCTGCT GCCGCCACAGTTTCGGCCGCTTTGCAGCAGCACCAGCGCCAGCAGCAACA GTACGTTATTCGCCGCTGGAAATCGTTCCTGCACAACAACAGCAACAATG CCAATCGACGTGCGGCGAAATCAACGGCAACAGCAACGGTGACGGCGGCA GCGACGTCGCAGCGCCATGGAACAAGCGGCGATTTCATTCAACCGTTAGA CGTCCGCCGTTCCTTTTCAACCAGCCACAAAATGCCGTCGTCGTCGAAAG CGCTCACACTGGATAACATAAATCCCAACTTTATTGCCATGGAATATGCC GTTCGCGGTCCTCTGGTGATTCGTGCTGGGGAAATCGAGAAGGAACTGGA AAAGGGTGTCAAGAAGCCATTCGACCAGGTGATCCGTGCCAACATCGGTG ATTGCCATGCGATGGGCCAGCAGCCCTTGACCTTCCTGCGACAGCTGTTG GCGCTGACCTTCGAGACACGTCTGCTGGATTCACCCGATTATCCCGAGGA CGTCAAGAAGCGCGCCTGTGCCATTTTGAACGGCTGCCAGGGTCAATCGG TGGGCTCGTACACCGACTCCGCCGGTCTGGAGGTGGTGCGTCGCCAGGTT GCTCAGTACATCGAGAAAAGGGATGGCGGCATCGCCTCCAATTGGCAGGA CATCTATCTAACCGGCGGTGCCTCTCCCGGCATCAAGAGCATTCTCTCCA TGATCAACGCCGAGGTGGGATGCAAGGCGCCTGGTGTCATGGTGCCCATT CCGCAGTACCCACTGTACTCGGCCACCATCTCTGAATATGGCATGACCAA GGTGGATTACTATCTGGAGGAGGAGACCGGCTGGAGCCTGGACAGGAAGG AGCTGCAACGGTCCTACGATGAGGCCAAGAAGGTCTGCAATCCGCGTGCC CTGGTCGTGATCAATCCGGGCAATCCCACCGGACAGGTACTGACCCGCGA GAACATCGAGGAGATCATTAAGTTCGCACACGATAACAAGGTGCTGGTGC TGGCCGATGAGGTGTACCAGGACAATGTCTACGACAAGAACTCCAAGTTC TGGTCGTTCAAGAAGGTGGCCTACGAAATGGGCGACCCCTATCGTAATCT GGAAATGGTCAGTTTCCTGTCCACCTCGAAGGGCTATCTGGGCGAGTGCG GCATTCGCGGCGGTTACATGGAGGTTCTCAATCTTGATCCCAAGGTCAAG GCCATGCTGACCAAGTCGATAACGGCGGCGCTTTGCAGCACCACCGCTGG CCAGGTGGCCGTGAGTGCCCTGGTCAATCCACCGCAGCCCGGAGAGCCAT CATACGATCTGTACAAGAAGGAGCGCGATGGCATTCTGGCCGCTCTAAAA GAACGGGCCGAGCTCGTCCACAAGGCACTGAACAGCTTCGAAGGCTACAA GGTTAACCCCGTACAGGGCGCCATGTACGTCTTTCCACAGATCGAGATCC CGCCCAAGGCGATCGAGGCGGCCAAGGCCAAGGGCATGGCCCCCGATGTT TTCTACGCATTTGAGCTGCTCGAGACGAGCGGCATTTGCATTGTTCCTGG CAGTGGATTTGGTCAGAAGCCCGGTACGTGGCATTTCCGAAGCACGATCC TCCCGCAAACGGACAAGCTGAAGCTGATGATGGAGAAGTTCCGCGTGTTC CACGCCGAGTTCATGAAGAAGTACAAGTAGATCAGCTGCCAACTTCCCCG TCCTCGATCCCTGTGTTAAGTGTCAATCCTCCGGCTTAGGATTAAAAATT TAAATTACCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13269326..13270154 | 904..1732 | 4085 | 99.5 | Plus |
chrX | 22417052 | chrX | 13268793..13269058 | 642..907 | 1315 | 99.6 | Plus |
chrX | 22417052 | chrX | 13264668..13264908 | 169..409 | 1205 | 100 | Plus |
chrX | 22417052 | chrX | 13270215..13270445 | 1731..1961 | 1155 | 100 | Plus |
chrX | 22417052 | chrX | 13261449..13261616 | 1..168 | 810 | 98.8 | Plus |
chrX | 22417052 | chrX | 13265050..13265196 | 409..555 | 735 | 100 | Plus |
chrX | 22417052 | chrX | 13268639..13268730 | 553..644 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13378543..13379371 | 904..1732 | 4070 | 99.4 | Plus |
X | 23542271 | X | 13378010..13378275 | 642..907 | 1330 | 100 | Plus |
X | 23542271 | X | 13373863..13374103 | 169..409 | 1175 | 99.2 | Plus |
X | 23542271 | X | 13379432..13379664 | 1731..1963 | 1135 | 99.1 | Plus |
X | 23542271 | X | 13370635..13370802 | 1..168 | 810 | 98.8 | Plus |
X | 23542271 | X | 13374240..13374386 | 409..555 | 735 | 100 | Plus |
X | 23542271 | X | 13377856..13377947 | 553..644 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13386641..13387469 | 904..1732 | 4070 | 99.3 | Plus |
X | 23527363 | X | 13386108..13386373 | 642..907 | 1330 | 100 | Plus |
X | 23527363 | X | 13381961..13382201 | 169..409 | 1175 | 99.1 | Plus |
X | 23527363 | X | 13387530..13387762 | 1731..1963 | 1135 | 99.1 | Plus |
X | 23527363 | X | 13378733..13378900 | 1..168 | 810 | 98.8 | Plus |
X | 23527363 | X | 13382338..13382484 | 409..555 | 735 | 100 | Plus |
X | 23527363 | X | 13385954..13386045 | 553..644 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6964 | 192..404 | 174 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2445 | 225..355 | 154 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6858 | 225..367 | 152 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6860 | 224..337 | 140 | 62.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2330..2469 | 224..355 | 139 | 60.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6730..6878 | 192..337 | 123 | 58.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1079..1171 | 225..324 | 113 | 63 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13261449..13261616 | 1..168 | 98 | -> | Plus |
chrX | 13264668..13264908 | 169..409 | 100 | -> | Plus |
chrX | 13265051..13265195 | 410..554 | 100 | -> | Plus |
chrX | 13268641..13268730 | 555..644 | 100 | -> | Plus |
chrX | 13268796..13269058 | 645..907 | 99 | -> | Plus |
chrX | 13269330..13270153 | 908..1731 | 99 | -> | Plus |
chrX | 13270216..13270445 | 1732..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 1..1728 | 153..1880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 1..1728 | 153..1880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 1..1728 | 153..1880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 1..1728 | 153..1880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 1..1728 | 153..1880 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 30..1990 | 1..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 30..1990 | 1..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 30..1990 | 1..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 30..1990 | 1..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1640-RB | 30..1990 | 1..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13370635..13370802 | 1..168 | 98 | -> | Plus |
X | 13373863..13374103 | 169..409 | 99 | -> | Plus |
X | 13374241..13374385 | 410..554 | 100 | -> | Plus |
X | 13377858..13377947 | 555..644 | 100 | -> | Plus |
X | 13378013..13378275 | 645..907 | 100 | -> | Plus |
X | 13378547..13379370 | 908..1731 | 99 | -> | Plus |
X | 13379433..13379662 | 1732..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13370635..13370802 | 1..168 | 98 | -> | Plus |
X | 13373863..13374103 | 169..409 | 99 | -> | Plus |
X | 13374241..13374385 | 410..554 | 100 | -> | Plus |
X | 13377858..13377947 | 555..644 | 100 | -> | Plus |
X | 13378013..13378275 | 645..907 | 100 | -> | Plus |
X | 13378547..13379370 | 908..1731 | 99 | -> | Plus |
X | 13379433..13379662 | 1732..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13370635..13370802 | 1..168 | 98 | -> | Plus |
X | 13373863..13374103 | 169..409 | 99 | -> | Plus |
X | 13374241..13374385 | 410..554 | 100 | -> | Plus |
X | 13377858..13377947 | 555..644 | 100 | -> | Plus |
X | 13378013..13378275 | 645..907 | 100 | -> | Plus |
X | 13378547..13379370 | 908..1731 | 99 | -> | Plus |
X | 13379433..13379662 | 1732..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13264668..13264835 | 1..168 | 98 | -> | Plus |
arm_X | 13267896..13268136 | 169..409 | 99 | -> | Plus |
arm_X | 13268274..13268418 | 410..554 | 100 | -> | Plus |
arm_X | 13271891..13271980 | 555..644 | 100 | -> | Plus |
arm_X | 13272046..13272308 | 645..907 | 100 | -> | Plus |
arm_X | 13272580..13273403 | 908..1731 | 99 | -> | Plus |
arm_X | 13273466..13273695 | 1732..1961 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13382339..13382483 | 410..554 | 100 | -> | Plus |
X | 13385956..13386045 | 555..644 | 100 | -> | Plus |
X | 13381961..13382201 | 169..409 | 99 | -> | Plus |
X | 13386111..13386373 | 645..907 | 100 | -> | Plus |
X | 13386645..13387468 | 908..1731 | 99 | -> | Plus |
X | 13387531..13387760 | 1732..1961 | 99 | Plus | |
X | 13378733..13378900 | 1..168 | 98 | -> | Plus |
Translation from 152 to 1879
> AT04676.pep MFKNRKIMSRMLIKPAAATVSAALQQHQRQQQQYVIRRWKSFLHNNSNNA NRRAAKSTATATVTAAATSQRHGTSGDFIQPLDVRRSFSTSHKMPSSSKA LTLDNINPNFIAMEYAVRGPLVIRAGEIEKELEKGVKKPFDQVIRANIGD CHAMGQQPLTFLRQLLALTFETRLLDSPDYPEDVKKRACAILNGCQGQSV GSYTDSAGLEVVRRQVAQYIEKRDGGIASNWQDIYLTGGASPGIKSILSM INAEVGCKAPGVMVPIPQYPLYSATISEYGMTKVDYYLEEETGWSLDRKE LQRSYDEAKKVCNPRALVVINPGNPTGQVLTRENIEEIIKFAHDNKVLVL ADEVYQDNVYDKNSKFWSFKKVAYEMGDPYRNLEMVSFLSTSKGYLGECG IRGGYMEVLNLDPKVKAMLTKSITAALCSTTAGQVAVSALVNPPQPGEPS YDLYKKERDGILAALKERAELVHKALNSFEGYKVNPVQGAMYVFPQIEIP PKAIEAAKAKGMAPDVFYAFELLETSGICIVPGSGFGQKPGTWHFRSTIL PQTDKLKLMMEKFRVFHAEFMKKYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19406-PA | 244 | GF19406-PA | 1..243 | 8..251 | 892 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17777-PA | 574 | GG17777-PA | 1..574 | 1..575 | 2791 | 95.5 | Plus |
Dere\GG17840-PA | 508 | GG17840-PA | 141..460 | 190..541 | 213 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24493-PA | 595 | GH24493-PA | 26..595 | 11..575 | 2058 | 69.9 | Plus |
Dgri\GH12929-PA | 483 | GH12929-PA | 116..460 | 190..572 | 195 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1640-PB | 575 | CG1640-PB | 1..575 | 1..575 | 2977 | 100 | Plus |
CG1640-PG | 568 | CG1640-PG | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PF | 568 | CG1640-PF | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PA | 568 | CG1640-PA | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PE | 568 | CG1640-PE | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PD | 568 | CG1640-PD | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PC | 568 | CG1640-PC | 1..568 | 8..575 | 2941 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15248-PA | 587 | GI15248-PA | 37..587 | 24..575 | 2025 | 68.6 | Plus |
Dmoj\GI15439-PA | 479 | GI15439-PA | 112..427 | 190..536 | 193 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18066-PA | 248 | GL18066-PA | 1..204 | 281..554 | 690 | 54.4 | Plus |
Dper\GL16219-PA | 149 | GL16219-PA | 29..135 | 35..134 | 241 | 55 | Plus |
Dper\GL14927-PA | 501 | GL14927-PA | 132..478 | 190..574 | 198 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22670-PA | 576 | GA22670-PA | 29..576 | 35..575 | 2376 | 81.5 | Plus |
Dpse\GA26121-PA | 126 | GA26121-PA | 14..126 | 284..404 | 460 | 69.4 | Plus |
Dpse\GA13109-PA | 497 | GA13109-PA | 128..474 | 190..574 | 199 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11628-PA | 568 | GM11628-PA | 1..568 | 1..575 | 2977 | 96.3 | Plus |
Dsec\GM17670-PA | 503 | GM17670-PA | 136..455 | 190..541 | 195 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17120-PA | 575 | GD17120-PA | 1..575 | 1..575 | 3054 | 97.9 | Plus |
Dsim\GD11952-PA | 266 | GD11952-PA | 1..266 | 94..359 | 1393 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14820-PA | 588 | GJ14820-PA | 37..588 | 21..575 | 2144 | 71.6 | Plus |
Translation from 152 to 1879
> AT04676.hyp MFKNRKIMSRMLIKPAAATVSAALQQHQRQQQQYVIRRWKSFLHNNSNNA NRRAAKSTATATVTAAATSQRHGTSGDFIQPLDVRRSFSTSHKMPSSSKA LTLDNINPNFIAMEYAVRGPLVIRAGEIEKELEKGVKKPFDQVIRANIGD CHAMGQQPLTFLRQLLALTFETRLLDSPDYPEDVKKRACAILNGCQGQSV GSYTDSAGLEVVRRQVAQYIEKRDGGIASNWQDIYLTGGASPGIKSILSM INAEVGCKAPGVMVPIPQYPLYSATISEYGMTKVDYYLEEETGWSLDRKE LQRSYDEAKKVCNPRALVVINPGNPTGQVLTRENIEEIIKFAHDNKVLVL ADEVYQDNVYDKNSKFWSFKKVAYEMGDPYRNLEMVSFLSTSKGYLGECG IRGGYMEVLNLDPKVKAMLTKSITAALCSTTAGQVAVSALVNPPQPGEPS YDLYKKERDGILAALKERAELVHKALNSFEGYKVNPVQGAMYVFPQIEIP PKAIEAAKAKGMAPDVFYAFELLETSGICIVPGSGFGQKPGTWHFRSTIL PQTDKLKLMMEKFRVFHAEFMKKYK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1640-PB | 575 | CG1640-PB | 1..575 | 1..575 | 2977 | 100 | Plus |
CG1640-PG | 568 | CG1640-PG | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PF | 568 | CG1640-PF | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PA | 568 | CG1640-PA | 1..568 | 8..575 | 2941 | 100 | Plus |
CG1640-PE | 568 | CG1640-PE | 1..568 | 8..575 | 2941 | 100 | Plus |