BDGP Sequence Production Resources |
Search the DGRC for AT04835
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 48 |
Well: | 35 |
Vector: | pOTB7 |
Associated Gene/Transcript | Hsp60D-RA |
Protein status: | AT04835.pep: gold |
Preliminary Size: | 1677 |
Sequenced Size: | 1917 |
Gene | Date | Evidence |
---|---|---|
CG16954 | 2002-01-01 | Sim4 clustering to Release 2 |
CG16954 | 2002-02-22 | Blastp of sequenced clone |
CG16954 | 2003-01-01 | Sim4 clustering to Release 3 |
Hsp60D | 2008-04-29 | Release 5.5 accounting |
Hsp60D | 2008-08-15 | Release 5.9 accounting |
Hsp60D | 2008-12-18 | 5.12 accounting |
1917 bp (1917 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089262
> AT04835.complete ACCCTTCAAAATGACCGAACTTTTCCAGATTAACATTTTCTACACTTTAC CGATTTCAAGCAACGTGAGTATCAAGGAATCAGGATGCTGAGCAGATTGG GCCGGAGTGGTCGGGCCGGTGTGCGCACCTTTGCCAATGACATTCGCTTT GGAGCCGAGGCGCGCTGCCTGCTTATGCAGGGCGTGAACGTCCTGGCCAA CGCGGTGGCCACCACTCTGGGCCCGAAGGGCAGGAACGTGCTCATCGAAC AGCTGCTGATCTCGCCCCGGATCACCAAGGATGGCATCACGGTGGCGAAT AACGTGCAGCTGGGCAATCGTCGGCAGGATATGGGAGTTCAATTGCTGCG CCAGGCCACCAATAATACCAATAATAAGGTAGGCGATGGCACCACCACGG CCACTATTCTGGCCCGTGGAATAGCCTGCCAGGGTATGCATGTGTTGCGC CAGAGCAAGGTGAACGTCCAACTCCTGCGGGAGGGCATTCTCGAGGGATC GCGCGCTGTGTGCGATGCTCTAGGTGAGATGTCCCAGTCGGTGGATACTA TTGGCCAAGTGGAAGCAGTGGCCAAGGTGGCACTGAATGGAGACGAACGG CTGGCGGAGCTGATTGGTGACATCATTTTGGAGCTGGGCGATAGCGGCGT CATCCTGCTGAAGGAATCCCACAGTCCCTTCGATGAGGCTAAGATCCAGG AGGGTATAACCATCGCTTCGGGCTACTATTCGCCATTCTTTGCCAAGCAA TCTCATACCCTGGAATTGGAGAATTGCTTGCTGCTGCTCACTTTGGCTAA GATTGATCAAGTGGAACAGATACTTCCCGCTCTCGAGCTGGCCAGACTAA AAGAACGACCCCTTCTGATCATTGCCAAAAATTTTGGTAGCGATTTGCTT AAGATCTTAGTGCTAAATAATCTGCAAGGTCGAGTTCAGGTCTGTGCTGT GAAGGCTCCAAGCTTTGGGGACGAGCAGTGCGAGGAAATGGAGGATATAG CTTTTGCCACCGGTGGCCATCTTCTGGAGGATGCCTCCAGTCTGGCGGAT CTCAGCGAGGAGGATCTGGGTGAGGTGATGGAGGCGGTGGTGGACGCTAA GGAAACGCACCTATTGCAACCGATCAATGTGAACGAGGAGCAGGTGCAGT GCCGCATCCAGGACATTCGTGAGCTGATCGATGAGGCTTTCACCGATGTG GAACTGGATCGCCTGAAAACACGACTTGGTCGCTTGCAGGGCCACCTGGC CACCATTTTCGTGGGCGGTACCAGTGAGCTGGAGGTGAGCGAGCGAAAGG ATCGCTTCAACGATGCCCTTCACGCCGTTCGAGTGGCCATAAGTGATGGT GTGGTTCCCGGAGGAGGAACCGCCTATCTACGATGTATTCCAGTTCTGGA CGAGTTGCCGCCAACCGATATAATGGAGCTCCAGGTTGGCAGGGAGATTG TAAAGGACGCTTTACGACTACCATGCTATACAATTGCCCGGAATGCTGGA GTGGACCCCAACGAGGTACTACGTCGGGTTTTAAAGGGCAGTGGCAACTA CGGATATGATGCCGCCGCTGGGGAATTCGGCGATCTTGTGGTCCGGGGAA TTGTGGATCCCACAAAAGTGTTGCAATCAGCCATGACGTCTGCCGCAGGA ATTGCCTCCCTTTTGGCCACCACCGAGGTGCTCATCACTAAACAACCCAC CAAACCGAAGATTCCGAAAAATCAGGTCACCAAGGATCTTGCTAAACTTG TTGGAATGTAGGTTAGGTAGTGCGTTTTGAAGAAACACAACATTTTATGT AATGATAAAAAGACCTAAATTCTATGTTGAAAAACTAAATGGTTAATACA AAGAAAAAATAAAATAATTCTGAGTTTCTTGTTTGCCATTGTCAAAAAAA AAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13446214..13448046 | 61..1893 | 100 | <- | Minus |
chr2L | 13448113..13448173 | 1..60 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RB | 1..1677 | 85..1761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RB | 1..1677 | 85..1761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1677 | 85..1761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RB | 1..1677 | 85..1761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1677 | 85..1761 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1894 | 1..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1894 | 1..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1894 | 1..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1894 | 1..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsp60D-RA | 1..1894 | 1..1893 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13447538..13449370 | 61..1893 | 100 | <- | Minus |
2L | 13449437..13449497 | 1..60 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13447538..13449370 | 61..1893 | 100 | <- | Minus |
2L | 13449437..13449497 | 1..60 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13447538..13449370 | 61..1893 | 100 | <- | Minus |
2L | 13449437..13449497 | 1..60 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13447538..13449370 | 61..1893 | 100 | <- | Minus |
arm_2L | 13449437..13449497 | 1..60 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13447538..13449370 | 61..1893 | 100 | <- | Minus |
2L | 13449437..13449497 | 1..60 | 96 | Minus |
Translation from 84 to 1760
> AT04835.pep MLSRLGRSGRAGVRTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGR NVLIEQLLISPRITKDGITVANNVQLGNRRQDMGVQLLRQATNNTNNKVG DGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMS QSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFD EAKIQEGITIASGYYSPFFAKQSHTLELENCLLLLTLAKIDQVEQILPAL ELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCE EMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVN EEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELE VSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQ VGREIVKDALRLPCYTIARNAGVDPNEVLRRVLKGSGNYGYDAAAGEFGD LVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTKPKIPKNQVTK DLAKLVGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21637-PA | 560 | GF21637-PA | 1..560 | 1..558 | 1918 | 65.4 | Plus |
Dana\GF15575-PA | 625 | GF15575-PA | 73..601 | 12..538 | 1166 | 44.9 | Plus |
Dana\GF20294-PA | 573 | GF20294-PA | 8..552 | 2..544 | 1161 | 43.6 | Plus |
Dana\GF20641-PA | 651 | GF20641-PA | 11..542 | 7..535 | 1116 | 43.6 | Plus |
Dana\GF13619-PA | 546 | GF13619-PA | 12..537 | 19..533 | 188 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10196-PA | 560 | GG10196-PA | 1..560 | 1..558 | 2624 | 89.8 | Plus |
Dere\GG18391-PA | 573 | GG18391-PA | 8..546 | 2..538 | 1148 | 43.9 | Plus |
Dere\GG25088-PA | 577 | GG25088-PA | 25..551 | 14..538 | 1132 | 44.2 | Plus |
Dere\GG24737-PA | 651 | GG24737-PA | 12..542 | 8..535 | 1114 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17925-PA | 573 | GH17925-PA | 8..552 | 2..544 | 1157 | 44.2 | Plus |
Dgri\GH11038-PA | 579 | GH11038-PA | 23..555 | 14..544 | 1118 | 43.1 | Plus |
Dgri\GH11219-PA | 626 | GH11219-PA | 11..543 | 7..536 | 1040 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hsp60D-PB | 558 | CG16954-PB | 1..558 | 1..558 | 2779 | 100 | Plus |
Hsp60D-PA | 558 | CG16954-PA | 1..558 | 1..558 | 2779 | 100 | Plus |
Hsp60A-PB | 573 | CG12101-PB | 8..552 | 2..544 | 1133 | 43.4 | Plus |
Hsp60A-PA | 573 | CG12101-PA | 8..552 | 2..544 | 1133 | 43.4 | Plus |
Hsp60C-PB | 576 | CG7235-PB | 24..550 | 14..538 | 1120 | 44.3 | Plus |
Hsp60C-PC | 576 | CG7235-PC | 24..550 | 14..538 | 1120 | 44.3 | Plus |
Hsp60C-PA | 576 | CG7235-PA | 24..550 | 14..538 | 1120 | 44.3 | Plus |
Hsp60B-PA | 648 | CG2830-PA | 12..542 | 8..535 | 1101 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16304-PA | 573 | GI16304-PA | 8..552 | 2..544 | 1169 | 44.2 | Plus |
Dmoj\GI17556-PA | 585 | GI17556-PA | 23..560 | 9..544 | 1130 | 43.4 | Plus |
Dmoj\GI21603-PA | 638 | GI21603-PA | 11..542 | 7..535 | 1107 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25699-PA | 564 | GL25699-PA | 1..564 | 1..558 | 1861 | 63.7 | Plus |
Dper\GL18870-PA | 611 | GL18870-PA | 11..541 | 7..535 | 1103 | 43.8 | Plus |
Dper\GL26372-PA | 579 | GL26372-PA | 23..551 | 14..538 | 994 | 39.9 | Plus |
Dper\GL22976-PA | 492 | GL22976-PA | 24..492 | 69..537 | 499 | 32 | Plus |
Dper\GL27099-PA | 1457 | GL27099-PA | 1343..1430 | 451..538 | 260 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14234-PA | 564 | GA14234-PA | 1..564 | 1..558 | 1858 | 63.7 | Plus |
Dpse\GA22684-PA | 573 | GA22684-PA | 8..546 | 2..538 | 1159 | 44.1 | Plus |
Dpse\GA28835-PA | 577 | GA28835-PA | 23..549 | 14..538 | 1128 | 43.8 | Plus |
Dpse\GA25838-PA | 634 | GA25838-PA | 11..541 | 7..535 | 1112 | 44 | Plus |
Dpse\GA22285-PA | 492 | GA22285-PA | 24..492 | 69..537 | 492 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25499-PA | 322 | GM25499-PA | 1..322 | 237..558 | 1601 | 95.3 | Plus |
Dsec\GM18564-PA | 576 | GM18564-PA | 23..550 | 13..538 | 1144 | 44.3 | Plus |
Dsec\GM16759-PA | 651 | GM16759-PA | 12..542 | 8..535 | 1111 | 44.6 | Plus |
Dsec\GM25488-PA | 219 | GM25488-PA | 1..207 | 1..207 | 1034 | 97.1 | Plus |
Dsec\GM11458-PA | 858 | GM11458-PA | 8..454 | 2..445 | 888 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22056-PA | 558 | GD22056-PA | 1..558 | 1..558 | 2695 | 94.8 | Plus |
Dsim\GD23355-PA | 576 | GD23355-PA | 23..550 | 13..538 | 1143 | 44.1 | Plus |
Dsim\GD17003-PA | 573 | GD17003-PA | 8..546 | 2..538 | 1139 | 43.5 | Plus |
Dsim\GD23041-PA | 651 | GD23041-PA | 12..542 | 8..535 | 1103 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15640-PA | 573 | GJ15640-PA | 8..552 | 2..544 | 1178 | 44.3 | Plus |
Dvir\GJ15562-PA | 583 | GJ15562-PA | 21..559 | 8..544 | 1128 | 43.2 | Plus |
Dvir\GJ17770-PA | 634 | GJ17770-PA | 11..543 | 7..536 | 1125 | 45.6 | Plus |
Dvir\GJ19440-PA | 533 | GJ19440-PA | 21..528 | 26..544 | 156 | 21.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15276-PA | 558 | GK15276-PA | 1..558 | 1..558 | 1719 | 60.4 | Plus |
Dwil\GK14688-PA | 582 | GK14688-PA | 25..551 | 14..538 | 1147 | 44.9 | Plus |
Dwil\GK16370-PA | 575 | GK16370-PA | 22..548 | 14..538 | 1138 | 44.2 | Plus |
Dwil\GK23787-PA | 639 | GK23787-PA | 13..543 | 8..535 | 1103 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11569-PA | 558 | GE11569-PA | 1..558 | 1..558 | 2574 | 91 | Plus |
Dyak\GE15908-PA | 573 | GE15908-PA | 8..546 | 2..538 | 1152 | 44.3 | Plus |
Dyak\GE25548-PA | 577 | GE25548-PA | 25..551 | 14..538 | 1132 | 44 | Plus |
Dyak\GE17001-PA | 657 | GE17001-PA | 12..546 | 8..539 | 1104 | 44.1 | Plus |
Translation from 84 to 1760
> AT04835.hyp MLSRLGRSGRAGVRTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGR NVLIEQLLISPRITKDGITVANNVQLGNRRQDMGVQLLRQATNNTNNKVG DGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMS QSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFD EAKIQEGITIASGYYSPFFAKQSHTLELENCLLLLTLAKIDQVEQILPAL ELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCE EMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVN EEQVQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELE VSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQ VGREIVKDALRLPCYTIARNAGVDPNEVLRRVLKGSGNYGYDAAAGEFGD LVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTKPKIPKNQVTK DLAKLVGM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hsp60D-PB | 558 | CG16954-PB | 1..558 | 1..558 | 2779 | 100 | Plus |
Hsp60D-PA | 558 | CG16954-PA | 1..558 | 1..558 | 2779 | 100 | Plus |
Hsp60-PB | 573 | CG12101-PB | 8..552 | 2..544 | 1133 | 43.4 | Plus |
Hsp60-PA | 573 | CG12101-PA | 8..552 | 2..544 | 1133 | 43.4 | Plus |
Hsp60C-PB | 576 | CG7235-PB | 24..550 | 14..538 | 1120 | 44.3 | Plus |