BDGP Sequence Production Resources |
Search the DGRC for AT04910
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 49 |
Well: | 10 |
Vector: | pOTB7 |
Associated Gene/Transcript | Idh-RD |
Protein status: | AT04910.pep: gold |
Sequenced Size: | 1638 |
Gene | Date | Evidence |
---|---|---|
Idh-RD | 2009-06-22 | Replacement based on scoring |
1638 bp assembled on 2009-08-06
GenBank Submission: BT099506.1
> AT04910.complete ATAAGTTTCGCCTGTATCGCCTGTGCTTAGGACCCCAAAACCCATAAGAT ATCCATGGATAATGAAAGGATGTCCGCCGTGAGCGAGCACTCAAGTGTGG TATGCTCTCCCGAACAGATGGCCCAGAAGATCAAAGCCGGTCCCGTTGTG GATGTCCTCGGTGACGAGATGACCCGCATCATTTGGGACTCCATTAAGAG CCAACTGATTCTGCCCTTCCTGGACATTGAGCTGCATACCTACGATCTGG GTATTGAGAACCGCGATAAAACCGAGGACCAGGTCACCATTGACTGTGCT GAGGCCATCAAGAAGTACAACGTGGGCATCAAGTGCGCCACAATCACTCC CGACGAGAAGCGCGTAGAGGAGTTCAACCTGAAGAAGATGTGGAAGTCGC CCAACGGTACCATCCGTAACATCTTGGGAGGAACCGTCTTCCGTGAGGCA ATCATCTGCAAGAACGTGCCCCGTCTGGTGACTGGCTGGCAGAAGCCTAT TGTGATCGGTCGCCATGCCCACGCCGATCAGTACAAGGCCGTCGACTACG TGGTTCCCGGACCCGGCAAGCTGACCCTCACCTGGAAGGGAACCGACGGT CAGGTCATCGATGAGGTCATTAATGACTTCAAGGGCCCCGGTATTGCCCT GGGAATGTTCAACACGGACGATTCCATTGTGGACTTTGCCCACGCCTCTT TCAAATATGCTCTGGACCGCAAGCTGCCGCTGTACATGAGCACCAAGAAC ACCATTCTGAAGAAGTACGATGGACGCTTCAAGGACATATTCGAGGACCT GTACAACAAGCAGTACAAGAAGGAGTACGAGGCGGCGGGCATCTGGTATG AGCACCGTCTCATCGACGATATGGTTGCTTATGCCATGAAGTCGGAGGGT GGCTTCGTGTGGGCCTGCAAGAACTACGACGGTGATGTGCAGTCGGACTC CGTTGCCCAGGGATACGGATCTCTGGGTCTGATGACCTCCGTGCTGCTAT GCCCCGATGGCAAGACCGTGGAGGCTGAAGCCGCTCACGGAACGGTGACG CGTCACTTCCGCTTCTACCAGCAGGGCAAGGAGACCTCCACCAACCCCAT TGCCTCGATATTCGCCTGGACCCGTGGCCTGCTGCATCGTGCCAAGCTGG ACAACAATGAGCCACTGAAGCAGTTCGCCGACACCCTTGAGCAGGTGTGC ATCGACACAATTGAGAGCGGCGCCATGACCAAGGATCTGGCCATCTGCAT TAAAGGCAACATCAACGCCGTTACTCGCAGGGACTACCAGGAGACTTTTG AGTTCATTAACACGCTGGCCAAGAACCTGGAGGGTGCCCTGGCCAAGAAT GCCGTTGCTGCCAAATGACTATCCGGCACTCAGTCCGAGCAGCAGGCCTC GCATCTCTAGAAAACTACTCAGCGATGCCTTGTCCTCTTCACCATATTCA CAATATTTCCATTCGTTTTTGTAGATGTGCATGTCCTAGGCTAAAAATCC GTGTCCTCGATGCATGTTTCCCACTGTTTCATTGTCTCTGCGAGACGCAA AAAAAAACCCTGATTTCCCTTTAACGTCTAACGGAAAAGAAATTTCAAAT AAATGTATTTTTATACCGGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idh-RD | 1692 | Idh-RD | 24..1643 | 1..1620 | 8025 | 99.6 | Plus |
Idh-RC | 1892 | Idh-RC | 364..1868 | 116..1620 | 7450 | 99.6 | Plus |
Idh-RH | 1671 | Idh-RH | 143..1647 | 116..1620 | 7450 | 99.6 | Plus |
Idh-RC | 1892 | Idh-RC | 308..365 | 30..87 | 290 | 100 | Plus |
Idh-RH | 1671 | Idh-RH | 88..144 | 31..87 | 285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8348433..8349964 | 88..1619 | 99 | <- | Minus |
chr3L | 8350045..8350131 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 1..1314 | 55..1368 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 1..1314 | 55..1368 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RK | 97..1440 | 25..1368 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RK | 97..1440 | 25..1368 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 24..1642 | 1..1619 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 24..1642 | 1..1619 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 24..1642 | 1..1619 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Idh-RD | 24..1642 | 1..1619 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8356404..8357935 | 88..1619 | 99 | <- | Minus |
3L | 8358016..8358102 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8356404..8357935 | 88..1619 | 99 | <- | Minus |
3L | 8358016..8358102 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8356404..8357935 | 88..1619 | 99 | <- | Minus |
3L | 8358016..8358102 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8349504..8351035 | 88..1619 | 99 | <- | Minus |
arm_3L | 8351116..8351202 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8349504..8351035 | 88..1619 | 99 | <- | Minus |
3L | 8351116..8351202 | 1..87 | 100 | Minus |
Translation from 54 to 1367
> AT04910.pep MDNERMSAVSEHSSVVCSPEQMAQKIKAGPVVDVLGDEMTRIIWDSIKSQ LILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKKYNVGIKCATITPD EKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIV IGRHAHADQYKAVDYVVPGPGKLTLTWKGTDGQVIDEVINDFKGPGIALG MFNTDDSIVDFAHASFKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLY NKQYKKEYEAAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSV AQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIA SIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIK GNINAVTRRDYQETFEFINTLAKNLEGALAKNAVAAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10112-PA | 469 | GF10112-PA | 44..458 | 1..426 | 2109 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15087-PA | 479 | GG15087-PA | 43..467 | 1..425 | 2216 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16411-PA | 446 | GH16411-PA | 29..444 | 16..433 | 2044 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idh-PK | 479 | CG7176-PK | 43..479 | 1..437 | 2298 | 100 | Plus |
Idh-PD | 437 | CG7176-PD | 1..437 | 1..437 | 2298 | 100 | Plus |
Idh-PC | 469 | CG7176-PC | 43..469 | 1..437 | 2223 | 97.7 | Plus |
Idh-PJ | 450 | CG7176-PJ | 35..450 | 22..437 | 2191 | 100 | Plus |
Idh-PI | 450 | CG7176-PI | 35..450 | 22..437 | 2191 | 100 | Plus |
Idh-PG | 450 | CG7176-PG | 35..450 | 22..437 | 2191 | 100 | Plus |
Idh-PB | 450 | CG7176-PB | 35..450 | 22..437 | 2191 | 100 | Plus |
Idh-PF | 416 | CG7176-PF | 1..416 | 22..437 | 2191 | 100 | Plus |
Idh-PA | 416 | CG7176-PA | 1..416 | 22..437 | 2191 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12492-PA | 441 | GI12492-PA | 24..433 | 22..431 | 2064 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24577-PA | 448 | GL24577-PA | 28..437 | 17..426 | 2082 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20156-PA | 448 | GA20156-PA | 28..437 | 17..426 | 2082 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24945-PA | 469 | GM24945-PA | 43..469 | 1..437 | 2216 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12997-PA | 479 | GD12997-PA | 43..479 | 1..437 | 2297 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12396-PA | 452 | GJ12396-PA | 33..444 | 22..433 | 2094 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18037-PA | 449 | GK18037-PA | 29..449 | 17..437 | 2123 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21312-PA | 469 | GE21312-PA | 43..458 | 1..426 | 2159 | 93.7 | Plus |
Translation from 54 to 1367
> AT04910.hyp MDNERMSAVSEHSSVVCSPEQMAQKIKAGPVVDVLGDEMTRIIWDSIKSQ LILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKKYNVGIKCATITPD EKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIV IGRHAHADQYKAVDYVVPGPGKLTLTWKGTDGQVIDEVINDFKGPGIALG MFNTDDSIVDFAHASFKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLY NKQYKKEYEAAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSV AQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIA SIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIK GNINAVTRRDYQETFEFINTLAKNLEGALAKNAVAAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idh-PK | 479 | CG7176-PK | 43..479 | 1..437 | 2298 | 100 | Plus |
Idh-PD | 437 | CG7176-PD | 1..437 | 1..437 | 2298 | 100 | Plus |
Idh-PC | 469 | CG7176-PC | 43..469 | 1..437 | 2223 | 97.7 | Plus |
Idh-PJ | 450 | CG7176-PJ | 35..450 | 22..437 | 2191 | 100 | Plus |
Idh-PI | 450 | CG7176-PI | 35..450 | 22..437 | 2191 | 100 | Plus |