Clone AT05092 Report

Search the DGRC for AT05092

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:50
Well:92
Vector:pOTB7
Associated Gene/TranscriptCG33293-RA
Protein status:AT05092.pep: gold
Preliminary Size:6601
Sequenced Size:684

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33293 2004-05-05 Blastp of sequenced clone
CG33293 2008-04-29 Release 5.5 accounting
CG33293 2008-08-15 Release 5.9 accounting
CG33293 2008-12-18 5.12 accounting

Clone Sequence Records

AT05092.complete Sequence

684 bp (684 high quality bases) assembled on 2012-12-12

GenBank Submission: BT014674.1

> AT05092.complete
GTCAATGTCGTTTGCGTCCCAGTCCAAATTCAGTTTACATTACTCGGTTA
CCTCAGTCCGAAGCCACTAGACATATATTTTTTAATATTTTGTAAGAGAT
TCCTTCCATCATGGAACGATTCGCACTGACAACCTGCATTCGCCGTGTCT
GGATCATGTCCGGATGGCTGCGCCAGGAGGCGGCAATAGCAGCCGGCATG
TTGGTGGTGCAGCGACACCAGGTTGAGCTGAGGAATGAGGAGGAGGAGGG
GCTCAAAGTCGGACAGCAGACTGCATCCAGTGGCGGTGACGTGGGCGTGG
ACTCGCAAGGAAGACTCCGCCGCGTGCGGCTGCTAGACGACTACATTGTG
CCCTTTGAATGCGGTCTTTGATTCTCGATCCCCATCTCCTGTTCACCGAT
ATGGTTCTGGGCCACAGCGCAGTTAGTTCATTTCGCATTCGAAGCAGTTG
GCATTCAAGTAGTTCGATTCGTGAAACCGCTTCTCCAAATTTTGGTCAGA
CGGAATCTTCATTGTATGCGCTCTACGTGGACGGAGAACGAAAACAAATA
TTTTAATCGAAGATATAGCCCCAAAAAGCATGTTATTGTAAAATTTTATA
TTTTCACGAGTAGTTCGCGTTAATCTCGACGTTTTAGCGACATTAAAATT
AAACAATCAATAAAAAAAAAAAAAAAAAAAAAAA

AT05092.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG33293-RA 687 CG33293-RA 19..679 1..661 3290 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1065678..1066244 661..95 2820 99.8 Minus
chr3R 27901430 chr3R 1066304..1066399 96..1 480 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:40:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:04:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5240014..5240580 661..95 2820 99.8 Minus
3R 32079331 3R 5240640..5240735 96..1 480 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4980845..4981411 661..95 2820 99.8 Minus
3R 31820162 3R 4981471..4981566 96..1 480 100 Minus
Blast to na_te.dros performed on 2019-03-15 14:04:38 has no hits.

AT05092.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:05:39 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1065678..1066242 97..661 99 <- Minus
chr3R 1066304..1066399 1..96 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:52:52 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..261 111..371 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-07 15:40:53 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..261 111..371 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:13 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..261 111..371 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:12:05 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..261 111..371 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:18 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..261 111..371 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:31:35 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..661 1..661 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:40:53 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..661 1..661 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:13 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..661 1..661 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:12:06 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..661 1..661 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:18 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
CG33293-RA 1..661 1..661 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5240014..5240578 97..661 99 <- Minus
3R 5240640..5240735 1..96 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5240014..5240578 97..661 99 <- Minus
3R 5240640..5240735 1..96 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5240014..5240578 97..661 99 <- Minus
3R 5240640..5240735 1..96 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:13 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1065736..1066300 97..661 99 <- Minus
arm_3R 1066362..1066457 1..96 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:48:46 Download gff for AT05092.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4980845..4981409 97..661 99 <- Minus
3R 4981471..4981566 1..96 100   Minus

AT05092.hyp Sequence

Translation from 110 to 370

> AT05092.hyp
MERFALTTCIRRVWIMSGWLRQEAAIAAGMLVVQRHQVELRNEEEEGLKV
GQQTASSGGDVGVDSQGRLRRVRLLDDYIVPFECGL*

AT05092.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG33293-PA 86 CG33293-PA 1..86 1..86 441 100 Plus

AT05092.pep Sequence

Translation from 110 to 370

> AT05092.pep
MERFALTTCIRRVWIMSGWLRQEAAIAAGMLVVQRHQVELRNEEEEGLKV
GQQTASSGGDVGVDSQGRLRRVRLLDDYIVPFECGL*

AT05092.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG33293-PA 86 CG33293-PA 1..86 1..86 441 100 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30106-PA 82 GA30106-PA 1..82 1..86 236 53.5 Plus
Dpse\GA25916-PA 87 GA25916-PA 1..87 1..86 174 46.6 Plus