AT05092.complete Sequence
684 bp (684 high quality bases) assembled on 2012-12-12
GenBank Submission: BT014674.1
> AT05092.complete
GTCAATGTCGTTTGCGTCCCAGTCCAAATTCAGTTTACATTACTCGGTTA
CCTCAGTCCGAAGCCACTAGACATATATTTTTTAATATTTTGTAAGAGAT
TCCTTCCATCATGGAACGATTCGCACTGACAACCTGCATTCGCCGTGTCT
GGATCATGTCCGGATGGCTGCGCCAGGAGGCGGCAATAGCAGCCGGCATG
TTGGTGGTGCAGCGACACCAGGTTGAGCTGAGGAATGAGGAGGAGGAGGG
GCTCAAAGTCGGACAGCAGACTGCATCCAGTGGCGGTGACGTGGGCGTGG
ACTCGCAAGGAAGACTCCGCCGCGTGCGGCTGCTAGACGACTACATTGTG
CCCTTTGAATGCGGTCTTTGATTCTCGATCCCCATCTCCTGTTCACCGAT
ATGGTTCTGGGCCACAGCGCAGTTAGTTCATTTCGCATTCGAAGCAGTTG
GCATTCAAGTAGTTCGATTCGTGAAACCGCTTCTCCAAATTTTGGTCAGA
CGGAATCTTCATTGTATGCGCTCTACGTGGACGGAGAACGAAAACAAATA
TTTTAATCGAAGATATAGCCCCAAAAAGCATGTTATTGTAAAATTTTATA
TTTTCACGAGTAGTTCGCGTTAATCTCGACGTTTTAGCGACATTAAAATT
AAACAATCAATAAAAAAAAAAAAAAAAAAAAAAA
AT05092.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:55:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33293-RA | 687 | CG33293-RA | 19..679 | 1..661 | 3290 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:04:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 1065678..1066244 | 661..95 | 2820 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 1066304..1066399 | 96..1 | 480 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:40:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:04:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5240014..5240580 | 661..95 | 2820 | 99.8 | Minus |
3R | 32079331 | 3R | 5240640..5240735 | 96..1 | 480 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:44:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 4980845..4981411 | 661..95 | 2820 | 99.8 | Minus |
3R | 31820162 | 3R | 4981471..4981566 | 96..1 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 14:04:38 has no hits.
AT05092.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:05:39 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 1065678..1066242 | 97..661 | 99 | <- | Minus |
chr3R | 1066304..1066399 | 1..96 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:52:52 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..261 | 111..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-07 15:40:53 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..261 | 111..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:13 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..261 | 111..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:12:05 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..261 | 111..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:18 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..261 | 111..371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:31:35 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..661 | 1..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:40:53 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..661 | 1..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:13 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..661 | 1..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:12:06 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..661 | 1..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:18 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33293-RA | 1..661 | 1..661 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5240014..5240578 | 97..661 | 99 | <- | Minus |
3R | 5240640..5240735 | 1..96 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5240014..5240578 | 97..661 | 99 | <- | Minus |
3R | 5240640..5240735 | 1..96 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:39 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5240014..5240578 | 97..661 | 99 | <- | Minus |
3R | 5240640..5240735 | 1..96 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:13 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1065736..1066300 | 97..661 | 99 | <- | Minus |
arm_3R | 1066362..1066457 | 1..96 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:48:46 Download gff for
AT05092.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4980845..4981409 | 97..661 | 99 | <- | Minus |
3R | 4981471..4981566 | 1..96 | 100 | | Minus |
AT05092.hyp Sequence
Translation from 110 to 370
> AT05092.hyp
MERFALTTCIRRVWIMSGWLRQEAAIAAGMLVVQRHQVELRNEEEEGLKV
GQQTASSGGDVGVDSQGRLRRVRLLDDYIVPFECGL*
AT05092.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33293-PA | 86 | CG33293-PA | 1..86 | 1..86 | 441 | 100 | Plus |
AT05092.pep Sequence
Translation from 110 to 370
> AT05092.pep
MERFALTTCIRRVWIMSGWLRQEAAIAAGMLVVQRHQVELRNEEEEGLKV
GQQTASSGGDVGVDSQGRLRRVRLLDDYIVPFECGL*
AT05092.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33293-PA | 86 | CG33293-PA | 1..86 | 1..86 | 441 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:07:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30106-PA | 82 | GA30106-PA | 1..82 | 1..86 | 236 | 53.5 | Plus |
Dpse\GA25916-PA | 87 | GA25916-PA | 1..87 | 1..86 | 174 | 46.6 | Plus |