BDGP Sequence Production Resources |
Search the DGRC for AT05339
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 53 |
Well: | 39 |
Vector: | pOTB7 |
Associated Gene/Transcript | SP555-RA |
Protein status: | AT05339.pep: gold |
Sequenced Size: | 1416 |
Gene | Date | Evidence |
---|---|---|
CG14042 | 2008-10-28 | Manual selection by Sue Celniker |
1416 bp assembled on 2009-04-13
GenBank Submission: BT088435.1
> AT05339.complete ATTGATACAAATTGAGAAGCGAAAAAATTTCTAGTCGCAACACAATGTCT GATGTTGAAGTGGATCCACAGCAGGCTCACCCCCATCCCATAGCGGCAAT TGCCCCGAGGAGACGTCGTCCAACCGGTCGACGAGGAGGAGTAACAGGAG GGTTGTCGTCCGGTTCACTGGATGCATCATCTTCCACATCGCCGCCACCC CGTTTCTGTCCGCTGCCCAATGGCGTTGAGGATAACTGGACGTGGAGCAA GCGGCACCGCTCCAAGGAAGTGGTGCTCAGAGGACCCAACTCGCGGACCG TGCACTTCCATCCCAACTGGAGCAAGGGCACTGCCGGTGTCCAGGGCAAA AGATCCCTGAATAACGGACGGCATTACTGGGAGCTTCATGTCTCGCAGCG CGTCTTTGGCACCTCGATAATGTTCGGTATCGGTACCAAGTCGGCACGGC TACATGCCAACGCCTTCCGGAACATGCTGGGCGAGAACGAACACGGCTGG GGACTGTCCCACAAGGGCGTGCTCTGGCACGAGGGCGTGGCCCTGCTGTA CACGAAGCGGTTCCGCGAGAATCAACCCACCCAAATTGGCGTTCTCTTCG ATGGCATTGAGGGCACACTCACCTTCTACAAGGATGGCAAGTGCCTGGGC GTTGCTTTCCGCGGATTGGATCAGATTGATGAGCCCCTGTACCCCATCGT ATGCTCTACTGCCGCCAAAACGGAGATGACCCTAAAGTGCACCAGGAGGG AGTTCGTCAACCTACAGGATCGCTGTCGGGCGGTGATCATGCGCCGCGTA CGAAGCGCTGCGCAGCTGGAGAAGCTGAAGCTGCCGCTGCCCATCGCCGA CTATCTGAGCGAGGTGATCGACGAGAAGAAGCCACTGCGTCAGGTGAATC AGCTGGAGATGTGCATTATGAATTACGATTTGTATGAGGCCCGTGAATGA TTTTAGTGCCATCACATATTGGAGTGCCCAATGACTACCAGACGATGCAG TGGCTCCTCTGGGACGTGTGCATTTCTCGTAGTAGCTTTAGAGCGTGCTA AGTTTAAGCATTCGGAATTTGTGTGGATAATAGTCGTCCGACCTTTTGAT TTGTCTTCATTTGTAGCGAAAATGTGGGAAAATAGGCCAATTTGGTGCAA TATTTGTGATATAAGAAATGAGAAAAACGTTTTTCGGGGCTTCAAGTGCT TGCTAGAAAATCGCAAAATAATCTAGAGCTAAGCATATTTTTCGGTACAG ACGAGTGTGAAATCTAGTCAAAAAGAACACGCTGCTAAACTAATTTTGTA AATTCGCAGACAGCAATTAAGGCCTAAGTACTGTAATGTAACAAAATGAA AATGTGTCTAGTCATAAATTGCATATAAAGCAAAGTGTAATTTAGTAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP555-RA | 2606 | SP555-RA | 1015..2415 | 1..1401 | 7005 | 100 | Plus |
SP555-RB | 2698 | SP555-RB | 1015..1909 | 1..895 | 4475 | 100 | Plus |
CG14042-RB | 2696 | CG14042-RB | 1015..1909 | 1..895 | 4475 | 100 | Plus |
SP555-RB | 2698 | SP555-RB | 1997..2507 | 891..1401 | 2555 | 100 | Plus |
CG14042-RB | 2696 | CG14042-RB | 1997..2507 | 891..1401 | 2555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5038167..5038840 | 1..674 | 3370 | 100 | Plus |
chr2L | 23010047 | chr2L | 5039217..5039722 | 891..1396 | 2530 | 100 | Plus |
chr2L | 23010047 | chr2L | 5038906..5039129 | 672..895 | 1120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5038167..5038840 | 1..674 | 100 | -> | Plus |
chr2L | 5038909..5039127 | 675..893 | 100 | -> | Plus |
chr2L | 5039220..5039722 | 894..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP555-RA | 1..906 | 45..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP555-RA | 1..906 | 45..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP555-RA | 1..906 | 45..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP555-RA | 1..906 | 45..950 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14042-RA | 1015..2410 | 1..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14042-RA | 1015..2410 | 1..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP555-RA | 1015..2410 | 1..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14042-RA | 1270..2665 | 1..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5039067..5039740 | 1..674 | 100 | -> | Plus |
2L | 5039809..5040027 | 675..893 | 100 | -> | Plus |
2L | 5040120..5040622 | 894..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5039067..5039740 | 1..674 | 100 | -> | Plus |
2L | 5039809..5040027 | 675..893 | 100 | -> | Plus |
2L | 5040120..5040622 | 894..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5039067..5039740 | 1..674 | 100 | -> | Plus |
2L | 5039809..5040027 | 675..893 | 100 | -> | Plus |
2L | 5040120..5040622 | 894..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5039067..5039740 | 1..674 | 100 | -> | Plus |
arm_2L | 5039809..5040027 | 675..893 | 100 | -> | Plus |
arm_2L | 5040120..5040622 | 894..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5039067..5039740 | 1..674 | 100 | -> | Plus |
2L | 5039809..5040027 | 675..893 | 100 | -> | Plus |
2L | 5040120..5040622 | 894..1396 | 100 | Plus |
Translation from 44 to 949
> AT05339.hyp MSDVEVDPQQAHPHPIAAIAPRRRRPTGRRGGVTGGLSSGSLDASSSTSP PPRFCPLPNGVEDNWTWSKRHRSKEVVLRGPNSRTVHFHPNWSKGTAGVQ GKRSLNNGRHYWELHVSQRVFGTSIMFGIGTKSARLHANAFRNMLGENEH GWGLSHKGVLWHEGVALLYTKRFRENQPTQIGVLFDGIEGTLTFYKDGKC LGVAFRGLDQIDEPLYPIVCSTAAKTEMTLKCTRREFVNLQDRCRAVIMR RVRSAAQLEKLKLPLPIADYLSEVIDEKKPLRQVNQLEMCIMNYDLYEAR E*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP555-PC | 301 | CG14041-PC | 1..301 | 1..301 | 1612 | 100 | Plus |
SP555-PA | 301 | CG14041-PA | 1..301 | 1..301 | 1612 | 100 | Plus |
SP555-PD | 293 | CG14041-PD | 1..289 | 1..296 | 1524 | 97 | Plus |
SP555-PB | 293 | CG14041-PB | 1..289 | 1..296 | 1524 | 97 | Plus |
CG10516-PA | 342 | CG10516-PA | 45..245 | 59..261 | 291 | 36.7 | Plus |
Translation from 44 to 949
> AT05339.pep MSDVEVDPQQAHPHPIAAIAPRRRRPTGRRGGVTGGLSSGSLDASSSTSP PPRFCPLPNGVEDNWTWSKRHRSKEVVLRGPNSRTVHFHPNWSKGTAGVQ GKRSLNNGRHYWELHVSQRVFGTSIMFGIGTKSARLHANAFRNMLGENEH GWGLSHKGVLWHEGVALLYTKRFRENQPTQIGVLFDGIEGTLTFYKDGKC LGVAFRGLDQIDEPLYPIVCSTAAKTEMTLKCTRREFVNLQDRCRAVIMR RVRSAAQLEKLKLPLPIADYLSEVIDEKKPLRQVNQLEMCIMNYDLYEAR E*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15713-PA | 304 | GF15713-PA | 1..304 | 1..296 | 1243 | 81.6 | Plus |
Dana\GF24101-PA | 339 | GF24101-PA | 15..243 | 55..261 | 275 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25044-PA | 301 | GG25044-PA | 1..301 | 1..301 | 1443 | 92.7 | Plus |
Dere\GG15936-PA | 342 | GG15936-PA | 17..245 | 55..261 | 305 | 34.5 | Plus |
Dere\GG23140-PA | 349 | GG23140-PA | 56..343 | 19..271 | 242 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11484-PA | 283 | GH11484-PA | 1..281 | 1..296 | 1135 | 73 | Plus |
Dgri\GH14773-PA | 345 | GH14773-PA | 48..244 | 59..262 | 268 | 33.7 | Plus |
Dgri\GH13013-PA | 349 | GH13013-PA | 117..343 | 56..271 | 232 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP555-PC | 301 | CG14041-PC | 1..301 | 1..301 | 1612 | 100 | Plus |
SP555-PA | 301 | CG14041-PA | 1..301 | 1..301 | 1612 | 100 | Plus |
SP555-PD | 293 | CG14041-PD | 1..289 | 1..296 | 1524 | 97 | Plus |
SP555-PB | 293 | CG14041-PB | 1..289 | 1..296 | 1524 | 97 | Plus |
CG10516-PA | 342 | CG10516-PA | 45..245 | 59..261 | 291 | 36.7 | Plus |
gus-PM | 279 | CG2944-PM | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PL | 279 | CG2944-PL | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PK | 279 | CG2944-PK | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PJ | 279 | CG2944-PJ | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PI | 279 | CG2944-PI | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PH | 279 | CG2944-PH | 5..273 | 33..271 | 236 | 27.9 | Plus |
gus-PG | 279 | CG2944-PG | 5..273 | 33..271 | 236 | 27.9 | Plus |
Fsn-PA | 255 | CG4643-PA | 83..246 | 67..230 | 196 | 32.7 | Plus |
Fsn-PB | 255 | CG4643-PB | 83..246 | 67..230 | 196 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16979-PA | 316 | GI16979-PA | 75..315 | 56..296 | 1117 | 83 | Plus |
Dmoj\GI11875-PA | 342 | GI11875-PA | 48..246 | 59..261 | 274 | 33 | Plus |
Dmoj\GI18267-PA | 349 | GI18267-PA | 117..343 | 56..271 | 230 | 27.8 | Plus |
Dmoj\GI18764-PA | 252 | GI18764-PA | 79..243 | 66..230 | 177 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26545-PA | 292 | GL26545-PA | 1..288 | 1..296 | 1147 | 75.3 | Plus |
Dper\GL15433-PA | 349 | GL15433-PA | 127..343 | 66..271 | 247 | 29.5 | Plus |
Dper\GL12741-PA | 163 | GL12741-PA | 51..154 | 65..169 | 185 | 38.9 | Plus |
Dper\GL10506-PA | 255 | GL10506-PA | 82..246 | 66..230 | 180 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12721-PA | 292 | GA12721-PA | 1..288 | 1..296 | 1147 | 75.3 | Plus |
Dpse\GA28209-PA | 347 | GA28209-PA | 38..245 | 55..261 | 300 | 35.5 | Plus |
Dpse\GA23998-PA | 349 | GA23998-PA | 127..343 | 66..271 | 247 | 29.5 | Plus |
Dpse\GA18323-PA | 255 | GA18323-PA | 82..246 | 66..230 | 180 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18519-PA | 301 | GM18519-PA | 1..301 | 1..301 | 1561 | 96.7 | Plus |
Dsec\GM26734-PA | 349 | GM26734-PA | 56..343 | 19..271 | 244 | 27.8 | Plus |
Dsec\GM25566-PA | 314 | GM25566-PA | 17..217 | 55..261 | 223 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12021-PA | 301 | GD12021-PA | 1..301 | 1..301 | 1566 | 97 | Plus |
Dsim\GD16681-PA | 349 | GD16681-PA | 56..343 | 19..271 | 244 | 27.8 | Plus |
Dsim\GD25778-PA | 245 | GD25778-PA | 82..224 | 66..206 | 156 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17226-PA | 299 | GJ17226-PA | 56..297 | 55..296 | 1156 | 84.3 | Plus |
Dvir\GJ13571-PA | 342 | GJ13571-PA | 48..246 | 59..261 | 275 | 33 | Plus |
Dvir\GJ21895-PA | 349 | GJ21895-PA | 117..343 | 56..271 | 234 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24858-PA | 301 | GK24858-PA | 59..301 | 51..296 | 1133 | 83.7 | Plus |
Dwil\GK24452-PA | 343 | GK24452-PA | 50..245 | 64..261 | 298 | 34.2 | Plus |
Dwil\GK14868-PA | 349 | GK14868-PA | 127..343 | 66..271 | 239 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11313-PA | 303 | GE11313-PA | 1..303 | 1..301 | 1451 | 92.7 | Plus |
Dyak\GE23167-PA | 342 | GE23167-PA | 17..245 | 55..261 | 305 | 34.5 | Plus |
Dyak\gus-PA | 349 | GE11348-PA | 75..343 | 33..271 | 241 | 27.6 | Plus |