Clone AT05366 Report

Search the DGRC for AT05366

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:53
Well:66
Vector:pOTB7
Associated Gene/TranscriptCG9133-RD
Protein status:AT05366.pep: gold
Sequenced Size:1729

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32332 2005-01-26 Blastp of sequenced clone
CG9133 2008-04-29 Release 5.5 accounting
CG9133 2008-08-15 Release 5.9 accounting
CG9130 2008-08-15 Release 5.9 accounting
CG9130 2008-12-18 5.12 accounting
CG9133 2008-12-18 5.12 accounting

Clone Sequence Records

AT05366.complete Sequence

1729 bp (1729 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021473

> AT05366.complete
AAGGGTGGCAAGGACGACAAGGGCAAGAAGAAGCGTCAGGCTGGAGGTGC
TGTTTGTCGCGTAGGAGACGAGAATAGTCCGTCCGCCGTCTACGAAGACT
GCGATCCTGTCTGCGCAGGAGTCCTCCAGGCGACCAAGAAAATTCGGTAC
AAGGAGCCCACTGCCAGGTGCAACGGACGGGAGGAGGAGTACGAAATGGC
CTGTGATGAAGCGCGAAAACGAGCTGTGCGGAAATTGCGCCACTTACTGG
TGAAGTACAATATCCAAATTGAGAATTGAAGGCTTTCGGAATTGAGATTT
CAGCTTGAGCCTAGTGAATAATTGTATTGACTTACACACTCAATCACTCA
ACCGCACAACATGGCCAAGAAGAGGGGAAGAAAGGGCAAGAAGGGCAAGA
AGCCAAAGGTTGACTGCAAGTTCAAGATCACCAATGAGATGCTCAAGCCC
ATGAACGAGAGTAAGTACACGCGGATCCCTGCACCGAAGCTCGGGTTTAA
GGATGATTCATCCCTTCCAATTGGTATCCTCAGATGTGGACGACTGTGAT
GGCTGCTGTCAGTGCGCCTGCGATTGCGACTGCAGTCCGGAGTTGGCTCC
CTGCTTCATCCAGCCGACCAAGCCGGATCCGGGTCCGGAGGCGTACGACG
AGTTCGAGGCCTGCCTCAATGGCAGCGGTCTGACCATACGCGTACTCAAG
AACACCCACAAGGTGGAGAGCGTGATGGATGGCAGCGAGACTGCGCCCAA
TCTGGGCGCAGGCGATGATCCCTGCTATCGCGATGACCCCAATGACTGCG
AGCCCGCAAAGGAGTCCTGCCTGCACGATATGCTCCAGCGCAGCTCCTTC
GCTCGCAACCACATTAAGCGCCGGACCGGCGGCCGCATCATCAACCACCC
GAACATCCCCAAGGTGCGAGCCAATATCAAGTACTCTGGGAACGATGCCT
GCGAGACCGACAACTACTACGTGCCATTCTCGAAGATCAAGGAGGCCTGC
GACTTCCAGGAGGCCAAGGTCGACTGCTACCGCCAGCGACTCTGCGGCGG
ATCCGATCCCATCGTGCCCGCGCACTGTCCCGTCCAGAACCAGCGATCAT
GTTGCATGCAGGTCGAGCGAAAGGACATCATGGACACCATGAAGGGTGTC
AATTTGGACACAAGGCGCAAGGGTATCGAGGTTTGCTACAAAACCTGCGA
GGAGACCGACAGCGACGTGTTCCTAGTAAAACTGGGAAGCAAGGCCAAGT
CGCAGCACAAGAAGAACACCATCGAGATCGAGCTGCGGACGCCCAAGCAG
CCCGTAACCCTTCCGATCAGCAAGGTGACCACGGAGACCTATGTTTCCGA
GGAGATGCTAACCGGTGGCAAGAAGGGGAAGAAGGGCAAGAAGGGCAAGG
GCAAGAAGGGCAAGGGCAAGAAGAAGAAGTAGACCAAGAGATCCGTAGGC
GGATCCCATTCCCATCGACCGGACTTGACGCTTACCCTTTCGGAACACAT
CCTTTGGCATTTTGGAAGTGACACTTTGAAAATTCACAGCAGCAATTATT
GAAATTTGGCTCTGGTACTAACCCATTCATATTAACCCGTCCAGTAAGAT
GCACGAACACTCACTTTTTCGACTAGTTACGTAAATGTATGCTTTTGATT
GAATTGAAATTAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT05366.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-RD 3111 CG9133-RD 1431..3104 1..1674 8145 99.1 Plus
CG9130-RB 3111 CG9130-RB 1431..3104 1..1674 8145 99.1 Plus
CG9130-RA 3038 CG9130-RA 1891..3031 534..1674 5540 99 Plus
CG9130-RA 3038 CG9130-RA 1431..1890 1..460 2255 99.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1253588..1254560 210..1182 4775 99.4 Plus
chr3L 24539361 chr3L 1254999..1255494 1179..1674 2345 98.2 Plus
chr3L 24539361 chr3L 1253027..1253237 1..211 1040 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:40:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1254074..1255046 210..1182 4790 99.5 Plus
3L 28110227 3L 1255486..1255981 1179..1674 2360 98.4 Plus
3L 28110227 3L 1253513..1253723 1..211 1025 99.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1254074..1255046 210..1182 4790 99.4 Plus
3L 28103327 3L 1255486..1255981 1179..1674 2360 98.3 Plus
3L 28103327 3L 1253513..1253723 1..211 1025 99 Plus
Blast to na_te.dros performed 2019-03-15 19:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 4958..5028 350..418 116 66.7 Plus
TART-C 11124 TART-C TARTC 11124bp 6414..6484 350..418 116 66.7 Plus

AT05366.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:03:59 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1253027..1253237 1..211 99 -> Plus
chr3L 1253590..1254558 212..1180 99 -> Plus
chr3L 1255001..1255483 1181..1663 98 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:53:24 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1..930 503..1432 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:41 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1..930 503..1432 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:40:36 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1..930 503..1432 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:58:10 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1..930 503..1432 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:08:50 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1..930 503..1432 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:10:09 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1431..3106 1..1675 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:41 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9133-RD 1431..3106 1..1675 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:40:36 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9130-RB 1431..3106 1..1675 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:58:10 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9130-RB 1431..3106 1..1675 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:08:50 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
CG9130-RB 1431..3106 1..1675 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:03:59 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253513..1253723 1..211 99 -> Plus
3L 1254076..1255044 212..1180 99 -> Plus
3L 1255488..1255970 1181..1663 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:03:59 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253513..1253723 1..211 99 -> Plus
3L 1254076..1255044 212..1180 99 -> Plus
3L 1255488..1255970 1181..1663 98 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:03:59 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253513..1253723 1..211 99 -> Plus
3L 1254076..1255044 212..1180 99 -> Plus
3L 1255488..1255970 1181..1663 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:40:36 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1253513..1253723 1..211 99 -> Plus
arm_3L 1254076..1255044 212..1180 99 -> Plus
arm_3L 1255488..1255970 1181..1663 98 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:33:40 Download gff for AT05366.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1253513..1253723 1..211 99 -> Plus
3L 1254076..1255044 212..1180 99 -> Plus
3L 1255488..1255970 1181..1663 98 -> Plus

AT05366.pep Sequence

Translation from 502 to 1431

> AT05366.pep
MIHPFQLVSSDVDDCDGCCQCACDCDCSPELAPCFIQPTKPDPGPEAYDE
FEACLNGSGLTIRVLKNTHKVESVMDGSETAPNLGAGDDPCYRDDPNDCE
PAKESCLHDMLQRSSFARNHIKRRTGGRIINHPNIPKVRANIKYSGNDAC
ETDNYYVPFSKIKEACDFQEAKVDCYRQRLCGGSDPIVPAHCPVQNQRSC
CMQVERKDIMDTMKGVNLDTRRKGIEVCYKTCEETDSDVFLVKLGSKAKS
QHKKNTIEIELRTPKQPVTLPISKVTTETYVSEEMLTGGKKGKKGKKGKG
KKGKGKKKK*

AT05366.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24445-PA 346 GF24445-PA 34..320 13..286 1224 85.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14771-PA 334 GG14771-PA 44..310 21..287 1348 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16009-PA 351 GH16009-PA 54..323 28..286 1008 75.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-PD 309 CG9133-PD 1..309 1..309 1694 100 Plus
CG9133-PB 332 CG9133-PB 31..332 8..309 1640 98.7 Plus
CG9133-PC 332 CG9133-PC 31..332 8..309 1640 98.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13045-PA 343 GI13045-PA 52..325 28..289 1024 72.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16167-PA 332 GL16167-PA 52..315 25..288 1088 79.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28412-PA 332 GA28412-PA 52..315 25..288 1122 79.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14392-PA 332 GM14392-PA 27..332 1..309 1560 95.5 Plus
Dsec\GM13185-PA 668 GM13185-PA 501..659 69..227 832 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13600-PA 347 GD13600-PA 44..325 21..287 1218 85.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12141-PA 336 GJ12141-PA 53..307 28..286 1086 79.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21154-PA 323 GK21154-PA 49..303 28..286 1061 77.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21135-PA 333 GE21135-PA 44..310 21..287 1347 96.6 Plus

AT05366.hyp Sequence

Translation from 502 to 1431

> AT05366.hyp
MIHPFQLVSSDVDDCDGCCQCACDCDCSPELAPCFIQPTKPDPGPEAYDE
FEACLNGSGLTIRVLKNTHKVESVMDGSETAPNLGAGDDPCYRDDPNDCE
PAKESCLHDMLQRSSFARNHIKRRTGGRIINHPNIPKVRANIKYSGNDAC
ETDNYYVPFSKIKEACDFQEAKVDCYRQRLCGGSDPIVPAHCPVQNQRSC
CMQVERKDIMDTMKGVNLDTRRKGIEVCYKTCEETDSDVFLVKLGSKAKS
QHKKNTIEIELRTPKQPVTLPISKVTTETYVSEEMLTGGKKGKKGKKGKG
KKGKGKKKK*

AT05366.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG9133-PD 309 CG9133-PD 1..309 1..309 1694 100 Plus
CG9133-PB 332 CG9133-PB 31..332 8..309 1640 98.7 Plus
CG9133-PC 332 CG9133-PC 31..332 8..309 1640 98.7 Plus