BDGP Sequence Production Resources |
Search the DGRC for AT05679
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 56 |
Well: | 79 |
Vector: | pOTB7 |
Associated Gene/Transcript | Ald-RE |
Protein status: | AT05679.pep: gold |
Sequenced Size: | 1687 |
Gene | Date | Evidence |
---|---|---|
Ald | 2011-02-10 | Manual selection by Sue Celniker |
1687 bp assembled on 2011-03-18
GenBank Submission: BT126163.1
> AT05679.complete CGTATACGAAATTTTAGTCCAAATTTTTAGTTTTATTTTTTACCTCGAAA TATTTCAAAATTCTGTGCTTACGCAATGGTTTCCAATCATCCGCGCCGCT GCGGAATTCGATAGCTAGCTTATTAAAACACAATGTCCGCTACTCTTTTT CATCCAACAAAATAACACCACACCAAATCAAACGTAAATGGATCTTCGTG CTGCAGAACTACACTCGAATCTCAAAAATGACGACCTACTTCAACTACCC CAGCAAGGAGCTGCAGGATGAGCTGCGCGAAATCGCCCAGAAAATCGTTG CCCCCGGCAAGGGAATCCTCGCCGCCGATGAGTCCGGCCCAACCATGGGC AAGCGTCTGCAGGACATCGGCGTGGAGAACACCGAGGACAACCGCCGTGC CTACCGTCAGCTGTTGTTCAGCACTGACCCCAAGCTGGCCGAGAACATCT CTGGAGTGATCCTGTTCCACGAGACCCTCTACCAGAAGGCCGATGATGGC ACCCCCTTCGCCGAGATCCTGAAGAAGAAGGGAATCATTCTGGGCATCAA GGTCGACAAGGGTGTTGTCCCACTGTTCGGCTCTGAGGATGAGGTCACCA CCCAGGGTCTGGATGACCTGGCCGCCCGTTGCGCCCAGTACAAGAAGGAC GGTTGCGACTTCGCCAAGTGGCGTTGCGTCCTGAAGATCGGCAAGAACAC CCCATCCTACCAGTCGATCCTGGAGAACGCCAATGTCCTGGCCCGCTACG CCTCCATCTGCCAGTCGCAGCGCATCGTCCCAATTGTGGAGCCCGAGGTT CTGCCCGATGGCGATCACGATCTGGACCGCGCCCAGAAGGTCACCGAGAC CGTCCTGGCCGCCGTCTACAAGGCCCTGAGCGACCACCACGTCTACCTGG AGGGTACTCTGCTGAAGCCCAACATGGTCACCGCCGGTCAGTCGGCCAAG AAGAACACCCCCGAGGAGATCGCCCTGGCCACCGTGCAGGCTCTGCGCCG CACCGTTCCCGCCGCCGTTACTGGCGTGACCTTCCTGTCTGGAGGTCAGT CCGAGGAGGAGGCCACCGTCAACCTGAGTGCCATCAACAACGTTCCCTTG ATCCGCCCATGGGCCCTCACCTTCTCGTACGGTCGTGCCCTGCAGGCCTC CGTCCTGCGTGCCTGGGCTGGCAAGAAGGAGAACATTGCTGCCGGCCAGA ACGAGCTGCTTAAGCGCGCCAAGGCTAACGGAGAGGCGGCTTGTGGTAAC TATACAGCTGGATCGGTTAAGGGGTTCGCTGGAAAAGATACTTTGCATGT GGATGACCACAGGTATTGATCAAAGGATTGAAGAATTGCTGCCTTAAGAT GGCGATGAACAAGCTTTCATGGGGCCAATTCCCAGGCCTGTCAGGGTATT TACGTGCCCGGCTCAATTCCGTCGTTTGCCGGCAATGCCAACCTCTTTGT CGCCCAGCACAAATACTAAGTCCTAAATGCCACGCACTAATCCCGAGTCA CAATCGAGCGAAGCTATATCCCAAGCCGAATCCAGATAATCCGCAAGAGT TACTGATCGAGGCCCAGCTGGAGTGAGACGGGCAACATTTATATTCCTCC AACAATGGAACTGCAAATATATTCCTTTTATACATTTTTACATTTTACCG AATAAACTGACTAGACCTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22080278..22081301 | 1024..1 | 5045 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 22079066..22079362 | 1669..1373 | 1470 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 22079986..22080191 | 1224..1019 | 1000 | 99 | Minus |
chr3R | 27901430 | chr3R | 22079527..22079683 | 1374..1218 | 770 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 22237241..22237860 | 309..928 | 505 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26257224..26258247 | 1024..1 | 5120 | 100 | Minus |
3R | 32079331 | 3R | 26256004..26256308 | 1677..1373 | 1510 | 99.7 | Minus |
3R | 32079331 | 3R | 26256932..26257137 | 1224..1019 | 1015 | 99.5 | Minus |
3R | 32079331 | 3R | 26256473..26256629 | 1374..1218 | 770 | 99.4 | Minus |
3R | 32079331 | 3R | 26414213..26414832 | 309..928 | 505 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25998055..25999078 | 1024..1 | 5120 | 100 | Minus |
3R | 31820162 | 3R | 25996835..25997139 | 1677..1373 | 1510 | 99.6 | Minus |
3R | 31820162 | 3R | 25997763..25997968 | 1224..1019 | 1015 | 99.5 | Minus |
3R | 31820162 | 3R | 25997304..25997460 | 1374..1218 | 770 | 99.3 | Minus |
3R | 31820162 | 3R | 26155305..26155424 | 570..689 | 315 | 84.1 | Plus |
3R | 31820162 | 3R | 26155044..26155132 | 309..397 | 160 | 78.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 22079066..22079361 | 1374..1669 | 99 | <- | Minus |
chr3R | 22079528..22079677 | 1224..1373 | 100 | <- | Minus |
chr3R | 22079987..22080186 | 1024..1223 | 99 | <- | Minus |
chr3R | 22080279..22081301 | 1..1023 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RI | 1..1092 | 228..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RE | 1..1092 | 228..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RE | 1..1092 | 228..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RE | 31..1682 | 1..1652 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RE | 33..1701 | 1..1669 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ald-RE | 33..1701 | 1..1669 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26256933..26257132 | 1024..1223 | 100 | <- | Minus |
3R | 26256012..26256307 | 1374..1669 | 100 | <- | Minus |
3R | 26256474..26256623 | 1224..1373 | 100 | <- | Minus |
3R | 26257225..26258247 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26256933..26257132 | 1024..1223 | 100 | <- | Minus |
3R | 26256012..26256307 | 1374..1669 | 100 | <- | Minus |
3R | 26256474..26256623 | 1224..1373 | 100 | <- | Minus |
3R | 26257225..26258247 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26256933..26257132 | 1024..1223 | 100 | <- | Minus |
3R | 26256012..26256307 | 1374..1669 | 100 | <- | Minus |
3R | 26256474..26256623 | 1224..1373 | 100 | <- | Minus |
3R | 26257225..26258247 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 22081734..22082029 | 1374..1669 | 100 | <- | Minus |
arm_3R | 22082196..22082345 | 1224..1373 | 100 | <- | Minus |
arm_3R | 22082655..22082854 | 1024..1223 | 100 | <- | Minus |
arm_3R | 22082947..22083969 | 1..1023 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25997764..25997963 | 1024..1223 | 100 | <- | Minus |
3R | 25996843..25997138 | 1374..1669 | 100 | <- | Minus |
3R | 25997305..25997454 | 1224..1373 | 100 | <- | Minus |
3R | 25998056..25999078 | 1..1023 | 100 | Minus |
Translation from 227 to 1318
> AT05679.hyp MTTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVE NTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKK KGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRC VLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLD RAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIAL ATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFS YGRALQASVLRAWAGKKENIAAGQNELLKRAKANGEAACGNYTAGSVKGF AGKDTLHVDDHRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ald-PI | 363 | CG6058-PI | 1..363 | 1..363 | 1861 | 100 | Plus |
Ald-PE | 363 | CG6058-PE | 1..363 | 1..363 | 1861 | 100 | Plus |
Ald-PJ | 363 | CG6058-PJ | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Ald-PL | 363 | CG6058-PL | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Ald-PH | 363 | CG6058-PH | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Translation from 227 to 1318
> AT05679.pep MTTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVE NTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKK KGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRC VLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLD RAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIAL ATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFS YGRALQASVLRAWAGKKENIAAGQNELLKRAKANGEAACGNYTAGSVKGF AGKDTLHVDDHRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16038-PA | 363 | GF16038-PA | 1..363 | 1..363 | 1779 | 92.6 | Plus |
Dana\GF20732-PA | 364 | GF20732-PA | 1..357 | 1..356 | 1372 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12193-PA | 363 | GG12193-PA | 1..363 | 1..363 | 1912 | 98.3 | Plus |
Dere\GG11473-PA | 364 | GG11473-PA | 1..357 | 1..356 | 1357 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18178-PA | 363 | GH18178-PA | 1..363 | 1..363 | 1665 | 86.8 | Plus |
Dgri\GH19415-PA | 364 | GH19415-PA | 1..360 | 1..359 | 1386 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ald-PI | 363 | CG6058-PI | 1..363 | 1..363 | 1861 | 100 | Plus |
Ald-PE | 363 | CG6058-PE | 1..363 | 1..363 | 1861 | 100 | Plus |
Ald-PJ | 363 | CG6058-PJ | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Ald-PL | 363 | CG6058-PL | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Ald-PH | 363 | CG6058-PH | 1..363 | 1..363 | 1760 | 95.3 | Plus |
Ald-PM | 361 | CG6058-PM | 1..361 | 1..363 | 1755 | 95.9 | Plus |
Ald-PK | 361 | CG6058-PK | 1..361 | 1..363 | 1755 | 95.9 | Plus |
Ald-PD | 361 | CG6058-PD | 1..361 | 1..363 | 1755 | 95.9 | Plus |
Ald-PC | 361 | CG6058-PC | 1..361 | 1..363 | 1755 | 95.9 | Plus |
Ald-PB | 361 | CG6058-PB | 1..361 | 1..363 | 1755 | 95.9 | Plus |
CG5432-PB | 364 | CG5432-PB | 1..357 | 1..356 | 1289 | 69.5 | Plus |
CG5432-PA | 364 | CG5432-PA | 1..357 | 1..356 | 1289 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10131-PA | 361 | GI10131-PA | 1..342 | 1..342 | 1599 | 87.7 | Plus |
Dmoj\GI22619-PA | 364 | GI22619-PA | 1..362 | 1..361 | 1393 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21844-PA | 364 | GL21844-PA | 1..364 | 1..363 | 1333 | 67.6 | Plus |
Dper\GL22000-PA | 319 | GL22000-PA | 1..178 | 1..177 | 758 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19329-PD | 363 | GA19329-PD | 1..363 | 1..363 | 1794 | 93.1 | Plus |
Dpse\GA19329-PC | 361 | GA19329-PC | 1..361 | 1..363 | 1735 | 90.6 | Plus |
Dpse\GA19329-PB | 363 | GA19329-PB | 1..363 | 1..363 | 1734 | 90.1 | Plus |
Dpse\GA18877-PA | 364 | GA18877-PA | 1..364 | 1..363 | 1337 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10189-PA | 363 | GM10189-PA | 1..363 | 1..363 | 1830 | 95 | Plus |
Dsec\GM10318-PA | 364 | GM10318-PA | 1..357 | 1..356 | 1352 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18141-PA | 363 | GD18141-PA | 1..363 | 1..363 | 1825 | 94.8 | Plus |
Dsim\GD21278-PA | 354 | GD21278-PA | 1..347 | 1..356 | 1271 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23350-PA | 363 | GJ23350-PA | 1..363 | 1..363 | 1651 | 85.4 | Plus |
Dvir\GJ23865-PA | 364 | GJ23865-PA | 1..362 | 1..361 | 1448 | 72.4 | Plus |