BDGP Sequence Production Resources |
Search the DGRC for AT05866
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 58 |
Well: | 66 |
Vector: | pOTB7 |
Associated Gene/Transcript | Prosbeta2R2-RA |
Protein status: | AT05866.pep: gold |
Preliminary Size: | 933 |
Sequenced Size: | 1255 |
Gene | Date | Evidence |
---|---|---|
CG12161 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12161 | 2002-01-09 | Blastp of sequenced clone |
CG12161 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12161 | 2008-04-29 | Release 5.5 accounting |
CG12161 | 2008-08-15 | Release 5.9 accounting |
CG12161 | 2008-12-18 | 5.12 accounting |
1255 bp (1255 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075170
> AT05866.complete TCCACGCATTATGTTCAACGGCTTACCAACCTTGATGAAATACCCAGACC GATCGCCTTTTCTGTGCGGTCCCAGCGGATTTACATTCGACAATTGTCTG CGCAACAAACAACTAAAAGAGAATGGCCTTGAGGAGCCGAATAGCTTTAC TACTGGCACCACTGTGGTGGGCATCGTGTTCGACGGCGGAGTAATCATAG GCGCCGAGTCCAGGGCTACCAGCGGCGGCATAGTTTTCTCAAAGACGTGC CGCAAAATTATTGAGCTGCAGGCCAACATTTTTGCCGCGGGAGCTGGAAC CGCTCGGGACACGAAAGCCCTGGTGGAACTGACGCGGGCGCAGCTGGAGC TTCACCGGATGAACACTGGGTTCCGCAAAGTGCCGGTGTGCTGTGCCAAC CAGATGATACGGCAGCTGCTGTTCCGTTTCAACGGGAATATAGATGCCGA CATGATCATAGGCGGCGCGGATAACACCGGAGCGCATCTCTTCTGCACCC GCAGCGACGGCTCCACGGACACGGCGCCCTTCACGTCCATCGGCTCCGGC TACCAGGTATCCATGTCCATCCTGGAGTCACGGTGGTCGGAGGACCTCTC CGAGGAGTCCGCCTGCGCCCTGGCTTGCGACGCCGTGGCCGCGGGCATGA AGAACGACCTGTGCTCCGGAGGCAAGGTCAGCCTCTGCGTCGTGCGCTGC GACTTCTCGGTGCAATGGCCCGAGCAGCTCCCCCGCCAGGTCCCACCAAC TCGCACCTATCGCCTGTCACCCAAGCCCGGCCGAACCACCATTCTATCCA CCTTGGTGCATCCGGTGCTTTCGTGGCGGGGCGCCCTAGCTCTGCCCGAG CCAGGAGGTAGCCAGGAGCCAGGGCGAGGACCAGGCACTAGTGGTGCCGC CAGAGGGCAGGAGGCCCCGCGCAGATCCAACAGTCTGGACGAGCCGGAGG CCAAAAGAAAGAAACGCGGAGGGAGATAGGACCCGGCTTGGGTGATCCTC AATATCCTTACCACAAATTTCTTGATTGGTCGTAAGCGTTTAGTGAGTTA CCGTGATTTCAAACTTTCCATCTGGAAATTGAAGCTTGTTGCGTTATCTT GTGCAAATTACACATTTTTTGTTTCGAGCACGACCTTCCACCAGGAGGAA AAGAGCTCTGTTACCCGGATATTTGTACGTAGATGGATTAAATCAAATTA AACCAAATTATTTAAAATCCAAATAAACCAAATTATCAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta2R2-RA | 1405 | Prosbeta2R2-RA | 94..1336 | 1..1243 | 6200 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1043415..1044369 | 1237..283 | 4745 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 1044435..1044615 | 282..102 | 890 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 1045009..1045110 | 102..1 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4958576..4959536 | 1243..283 | 4790 | 99.8 | Minus |
3R | 31820162 | 3R | 4959602..4959782 | 282..102 | 905 | 100 | Minus |
3R | 31820162 | 3R | 4960176..4960277 | 102..1 | 510 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1043472..1044369 | 283..1180 | 99 | <- | Minus |
chr3R | 1044435..1044614 | 103..282 | 99 | <- | Minus |
chr3R | 1045009..1045110 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12161-RA | 1..969 | 11..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 1..969 | 11..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 1..969 | 11..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12161-RA | 1..969 | 11..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 1..969 | 11..979 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12161-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12161-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R2-RA | 83..1319 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5217751..5218705 | 283..1237 | 99 | <- | Minus |
3R | 5218771..5218950 | 103..282 | 100 | <- | Minus |
3R | 5219345..5219446 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5217751..5218705 | 283..1237 | 99 | <- | Minus |
3R | 5218771..5218950 | 103..282 | 100 | <- | Minus |
3R | 5219345..5219446 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5217751..5218705 | 283..1237 | 99 | <- | Minus |
3R | 5218771..5218950 | 103..282 | 100 | <- | Minus |
3R | 5219345..5219446 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1043473..1044427 | 283..1237 | 99 | <- | Minus |
arm_3R | 1044493..1044672 | 103..282 | 100 | <- | Minus |
arm_3R | 1045067..1045168 | 1..102 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4958582..4959536 | 283..1237 | 99 | <- | Minus |
3R | 4959602..4959781 | 103..282 | 100 | <- | Minus |
3R | 4960176..4960277 | 1..102 | 100 | Minus |
Translation from 1 to 978
> AT05866.hyp PRIMFNGLPTLMKYPDRSPFLCGPSGFTFDNCLRNKQLKENGLEEPNSFT TGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGT ARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDAD MIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLS EESACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQWPEQLPRQVPPT RTYRLSPKPGRTTILSTLVHPVLSWRGALALPEPGGSQEPGRGPGTSGAA RGQEAPRRSNSLDEPEAKRKKRGGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta2R2-PA | 322 | CG12161-PA | 1..322 | 4..325 | 1693 | 100 | Plus |
Prosbeta2-PA | 272 | CG3329-PA | 12..268 | 25..282 | 533 | 43.7 | Plus |
Prosbeta2R1-PA | 307 | CG18341-PA | 21..264 | 25..269 | 516 | 43.3 | Plus |
Prosbeta5-PA | 282 | CG12323-PA | 47..255 | 29..234 | 210 | 27.6 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 47..255 | 29..234 | 210 | 27.6 | Plus |
Translation from 10 to 978
> AT05866.pep MFNGLPTLMKYPDRSPFLCGPSGFTFDNCLRNKQLKENGLEEPNSFTTGT TVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARD TKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADMII GGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEES ACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQWPEQLPRQVPPTRTY RLSPKPGRTTILSTLVHPVLSWRGALALPEPGGSQEPGRGPGTSGAARGQ EAPRRSNSLDEPEAKRKKRGGR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20928-PA | 1093 | GF20928-PA | 1..269 | 1..269 | 679 | 48.7 | Plus |
Dana\GF23798-PA | 272 | GF23798-PA | 13..268 | 23..279 | 506 | 43.8 | Plus |
Dana\GF21212-PA | 322 | GF21212-PA | 24..228 | 23..228 | 497 | 44.7 | Plus |
Dana\GF13303-PA | 314 | GF13303-PA | 67..247 | 45..225 | 212 | 32.2 | Plus |
Dana\GF13778-PA | 284 | GF13778-PA | 47..247 | 26..223 | 204 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11178-PA | 322 | GG11178-PA | 1..316 | 1..318 | 1149 | 71.7 | Plus |
Dere\GG15711-PA | 272 | GG15711-PA | 12..235 | 22..257 | 506 | 46.2 | Plus |
Dere\GG18789-PA | 307 | GG18789-PA | 22..226 | 23..228 | 500 | 45.6 | Plus |
Dere\GG20051-PA | 390 | GG20051-PA | 68..250 | 46..228 | 218 | 32.4 | Plus |
Dere\GG20151-PA | 282 | GG20151-PA | 47..255 | 26..231 | 208 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16666-PA | 272 | GH16666-PA | 12..268 | 22..279 | 530 | 43 | Plus |
Dgri\GH12772-PA | 300 | GH12772-PA | 19..222 | 24..228 | 478 | 45.9 | Plus |
Dgri\GH17051-PA | 299 | GH17051-PA | 27..219 | 52..244 | 334 | 35.2 | Plus |
Dgri\GH23050-PA | 315 | GH23050-PA | 71..247 | 49..225 | 213 | 32 | Plus |
Dgri\GH14538-PA | 275 | GH14538-PA | 56..239 | 49..231 | 200 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta2R2-PA | 322 | CG12161-PA | 1..322 | 1..322 | 1693 | 100 | Plus |
Prosbeta2-PA | 272 | CG3329-PA | 12..268 | 22..279 | 533 | 43.7 | Plus |
Prosbeta2R1-PA | 307 | CG18341-PA | 21..264 | 22..266 | 516 | 43.3 | Plus |
Prosbeta5-PA | 282 | CG12323-PA | 47..255 | 26..231 | 210 | 27.6 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 47..255 | 26..231 | 210 | 27.6 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 68..247 | 46..225 | 210 | 32 | Plus |
Prosbeta5R2-PB | 279 | CG31742-PB | 52..247 | 31..225 | 201 | 31 | Plus |
Prosbeta5R2-PA | 279 | CG31742-PA | 52..247 | 31..225 | 201 | 31 | Plus |
Prosbeta1-PA | 224 | CG8392-PA | 13..197 | 47..231 | 186 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11352-PA | 270 | GI11352-PA | 12..235 | 22..257 | 560 | 46.6 | Plus |
Dmoj\GI15360-PA | 313 | GI15360-PA | 19..225 | 24..231 | 478 | 44.7 | Plus |
Dmoj\GI12054-PA | 322 | GI12054-PA | 16..320 | 23..319 | 455 | 35.5 | Plus |
Dmoj\GI21121-PA | 314 | GI21121-PA | 68..247 | 46..225 | 223 | 32.6 | Plus |
Dmoj\GI10892-PA | 322 | GI10892-PA | 59..253 | 32..229 | 220 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24711-PA | 272 | GL24711-PA | 12..235 | 22..257 | 521 | 46.6 | Plus |
Dper\GL21838-PA | 312 | GL21838-PA | 1..260 | 1..259 | 494 | 39.7 | Plus |
Dper\GL15166-PA | 327 | GL15166-PA | 18..226 | 20..228 | 486 | 45.7 | Plus |
Dper\GL22004-PA | 298 | GL22004-PA | 1..254 | 8..259 | 479 | 40.8 | Plus |
Dper\GL13291-PA | 237 | GL13291-PA | 62..216 | 48..235 | 200 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17382-PA | 272 | GA17382-PA | 12..235 | 22..257 | 519 | 46.6 | Plus |
Dpse\GA26418-PA | 312 | GA26418-PA | 1..268 | 1..269 | 497 | 39.3 | Plus |
Dpse\GA14896-PA | 327 | GA14896-PA | 18..226 | 20..228 | 486 | 45.7 | Plus |
Dpse\GA27343-PA | 251 | GA27343-PA | 7..250 | 8..248 | 481 | 42.4 | Plus |
Dpse\GA11556-PA | 279 | GA11556-PA | 70..247 | 46..223 | 197 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10658-PA | 322 | GM10658-PA | 1..322 | 1..322 | 1499 | 87.3 | Plus |
Dsec\GM12440-PA | 307 | GM12440-PA | 16..226 | 17..228 | 520 | 47.6 | Plus |
Dsec\GM25498-PA | 272 | GM25498-PA | 12..268 | 22..279 | 513 | 43.7 | Plus |
Dsec\GM21240-PA | 282 | GM21240-PA | 47..279 | 26..243 | 220 | 27.4 | Plus |
Dsec\GM15565-PA | 315 | GM15565-PA | 68..251 | 46..229 | 212 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19639-PA | 322 | GD19639-PA | 1..322 | 1..322 | 1511 | 88.2 | Plus |
Dsim\GD16756-PA | 307 | GD16756-PA | 16..226 | 17..228 | 516 | 47.6 | Plus |
Dsim\GD14518-PA | 272 | GD14518-PA | 12..268 | 22..279 | 514 | 43.7 | Plus |
Dsim\GD10758-PA | 282 | GD10758-PA | 47..279 | 26..243 | 220 | 27.4 | Plus |
Dsim\GD24120-PA | 279 | GD24120-PA | 57..247 | 36..225 | 188 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11606-PA | 270 | GJ11606-PA | 10..233 | 22..257 | 521 | 45.8 | Plus |
Dvir\GJ16628-PA | 304 | GJ16628-PA | 18..222 | 23..228 | 482 | 45.1 | Plus |
Dvir\GJ13326-PA | 328 | GJ13326-PA | 16..228 | 23..235 | 467 | 43.2 | Plus |
Dvir\GJ20967-PA | 312 | GJ20967-PA | 71..247 | 49..225 | 206 | 30.9 | Plus |
Dvir\GJ16567-PA | 328 | GJ16567-PA | 69..251 | 47..229 | 202 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18404-PA | 359 | GK18404-PA | 1..239 | 1..239 | 577 | 45.2 | Plus |
Dwil\GK10550-PA | 272 | GK10550-PA | 12..255 | 22..266 | 549 | 45.6 | Plus |
Dwil\GK25153-PA | 353 | GK25153-PA | 24..231 | 23..230 | 517 | 45.2 | Plus |
Dwil\GK18059-PA | 311 | GK18059-PA | 66..249 | 45..228 | 211 | 30.8 | Plus |
Dwil\GK19557-PA | 362 | GK19557-PA | 67..250 | 45..228 | 211 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25306-PA | 324 | GE25306-PA | 1..320 | 1..322 | 1183 | 71.4 | Plus |
Dyak\GE16434-PA | 315 | GE16434-PA | 16..294 | 17..293 | 516 | 40 | Plus |
Dyak\GE22042-PA | 272 | GE22042-PA | 12..259 | 22..270 | 508 | 44.4 | Plus |
Dyak\GE11586-PA | 315 | GE11586-PA | 67..247 | 45..225 | 217 | 33.3 | Plus |
Dyak\Prosbeta5-PA | 282 | GE12841-PA | 47..255 | 26..231 | 209 | 28.1 | Plus |