Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT06251.complete Sequence
1054 bp (1054 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089266
> AT06251.complete
ATTTGTCAGTTATCGTTTTTAAAAATTCGAAATTCCCTAGTTAAGCCAAT
GATTCAGGAACCGAACTGGAAAAAGGACTACGACCGTCTGGTCCGCGAGC
ATTTGAATGATCAGAATCAGACGAAGTCGCTACAACGACAAATACGGCAT
TTTCGCTCAAAGCGCGTACGACTCCAGAATGAAATCGAGGCGGAGAGCAG
GAGCATGGACGTTTGGGTAAAGATGATGGAGAACTTGCACCGCGGAGTGG
AGCGCTTTCAGAAGCACCACCACCTGCTCACGCCCAAAAAGCGCAAGCAG
CTGCGCCGCATAATGCGAAAGCTGCCCTTGAGCAGTTTGGATGAGCAGGT
GCGACTGATGGAGGTGTCGGAGCGGTTGGTGCCCAAGCCGTGCAAGGAGA
CTCCTGAACCACCGAAGGGCAACGAACGCCAGTTCATCAAGTACTCAGTT
CCGCATCAGAAAAAGAACTGTGATCCTAATAATCAATCCCCCGTGGACAA
ACGGCTGGCCAGGATATATGCCAATCTGAAGGCTCTGCTAAAAATCCACG
AGCAGACCTCGTCCGTCATCGCTGATATACATTCCCTGATCGCCACTATT
AACTATTTGGAGCGGGGGCACTGCACCAAGATAAAGATCACTCCAGCGGA
GGGCTCCAGGCCGTCAATAAAGGCTACCATCGAATTGGATCGGCTGCGCA
AGACCAAGCACGGCAACCACTACACGCGGGAAATTATGGACGTACGTCCT
CCGTACATCCTTGACCATGTGCCGCAATTGAAACCAAACATTTTCGACGC
TCTGGGGAGAAAGGCGAAAAAATCAAAATCCAAGCACTGAACCGTTTCTG
GTGGGGAAAATAATTTATTACTCCAAGAATTAGTCTACTTAGACATAGTC
TACTGAACATGCTCTATGCTACGCTAGTTCTGTCCTGCGTCAGTTTGATA
TATACAATTTACAATAATCTCATTTAGCTCGGGCAAAGTGGTGGCTGATT
ACAGAGAACAATTTAAATTATATCCAAACCAATAGAAAAAAAAAAAAAAA
AAAA
AT06251.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:27:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5478-RA | 1035 | CG5478-RA | 1..1035 | 1..1035 | 5175 | 100 | Plus |
CG4221-RA | 3250 | CG4221-RA | 3031..3250 | 1036..817 | 1100 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 11757292..11758326 | 1035..1 | 5175 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:41:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15932699..15933734 | 1036..1 | 5180 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 15673530..15674565 | 1036..1 | 5180 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 19:06:07 has no hits.
AT06251.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:07:12 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 11757292..11758326 | 1..1035 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:54:07 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..792 | 49..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:43:13 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..792 | 49..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:41:09 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..792 | 49..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:44 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..792 | 49..840 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:21 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..792 | 49..840 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:50 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..1035 | 1..1035 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:43:13 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..1035 | 1..1035 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:41:09 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..1035 | 1..1035 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:44 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..1035 | 1..1035 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:21 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5478-RA | 1..1035 | 1..1035 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:12 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15932700..15933734 | 1..1035 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:12 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15932700..15933734 | 1..1035 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:07:12 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15932700..15933734 | 1..1035 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:41:09 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11758422..11759456 | 1..1035 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:46:14 Download gff for
AT06251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15673531..15674565 | 1..1035 | 100 | | Minus |
AT06251.hyp Sequence
Translation from 1 to 839
> AT06251.hyp
ICQLSFLKIRNSLVKPMIQEPNWKKDYDRLVREHLNDQNQTKSLQRQIRH
FRSKRVRLQNEIEAESRSMDVWVKMMENLHRGVERFQKHHHLLTPKKRKQ
LRRIMRKLPLSSLDEQVRLMEVSERLVPKPCKETPEPPKGNERQFIKYSV
PHQKKNCDPNNQSPVDKRLARIYANLKALLKIHEQTSSVIADIHSLIATI
NYLERGHCTKIKITPAEGSRPSIKATIELDRLRKTKHGNHYTREIMDVRP
PYILDHVPQLKPNIFDALGRKAKKSKSKH*
AT06251.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5478-PA | 263 | CG5478-PA | 1..263 | 17..279 | 1381 | 100 | Plus |
AT06251.pep Sequence
Translation from 48 to 839
> AT06251.pep
MIQEPNWKKDYDRLVREHLNDQNQTKSLQRQIRHFRSKRVRLQNEIEAES
RSMDVWVKMMENLHRGVERFQKHHHLLTPKKRKQLRRIMRKLPLSSLDEQ
VRLMEVSERLVPKPCKETPEPPKGNERQFIKYSVPHQKKNCDPNNQSPVD
KRLARIYANLKALLKIHEQTSSVIADIHSLIATINYLERGHCTKIKITPA
EGSRPSIKATIELDRLRKTKHGNHYTREIMDVRPPYILDHVPQLKPNIFD
ALGRKAKKSKSKH*
AT06251.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:21:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16468-PA | 274 | GF16468-PA | 5..264 | 7..254 | 595 | 49.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:21:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20256-PA | 267 | GG20256-PA | 1..267 | 1..263 | 1088 | 77.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5478-PA | 263 | CG5478-PA | 1..263 | 1..263 | 1381 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:21:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21724-PA | 257 | GL21724-PA | 8..250 | 6..257 | 320 | 30.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:21:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA18911-PA | 255 | GA18911-PA | 8..248 | 6..257 | 309 | 30 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25742-PA | 262 | GM25742-PA | 1..262 | 1..263 | 1287 | 92.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20316-PA | 262 | GD20316-PA | 1..262 | 1..263 | 1296 | 93.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:21:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ23459-PA | 238 | GJ23459-PA | 9..236 | 7..252 | 183 | 26.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:21:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19205-PA | 259 | GK19205-PA | 5..253 | 7..254 | 280 | 29.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:21:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26346-PA | 268 | GE26346-PA | 1..268 | 1..263 | 1043 | 75 | Plus |