Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT06648.complete Sequence
764 bp (764 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113211
> AT06648.complete
TCACATTTCTCGATCGTCAGAAATAAAATCGGAGCTTATGCGTCGCTTGC
AATTATTTTAAATTCTTAGTAAACTTTCTTGGAAAATGCTTAAATATTTG
GCTGGAATTTTCGTCAGTCCGCGCAATGACTACGCGAATGGTCGCTACAG
GATTCCGCATCCGAAGAAGCTGGCCGCCAGGCGAAAGTCGCCCCCGGTGA
ATATATCCACGAGGAGCGTCATCAATGGCGGCAGGTCGGCAAACGGGAGG
CTCAAGACGGAAAATAGAAACGCACGGCGACGTCGAGAGGGCAATCCACA
TCTGACGCGACCACACAGCCGATCCTCCCAGAAAACCATAGGGATCCGCC
TGGATCCCATTAGCTACATCGTAAATGTGCCCAATTCCACTTCATCGCCC
GACGACGACGAGGAGGAGGTGCCTGTACCGCAATTGCCCAACGCAGTAAA
CAAACTGAAGGCTCGAACGTATCGGAAGGAGAATTCCGATTGCCTTATTC
CACCGCCAGTTAGTCGCGTCGCGAGTTGGTCGGGTCCTTTGAATGCCAGT
CCCTTCAACCAGCTGGATGAGCAGAATTCCATCTCTGACGATGCGGACGC
AATGGGCTGGAAAGCGATTTGTTTGCCAGATGATTTTTGGTCGGAGGATT
CGGACTCGGAAAGCAAAAGCAAAATGAGTAAAATCAATGTCTTTTAATAT
ACAAAAAATTTATTTTAAATATTATAATAGTTGACCATTCAATAAGAAAA
AAAAAAAAAAAAAA
AT06648.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11756-RA | 747 | CG11756-RA | 1..747 | 1..747 | 3735 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:18:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 11239264..11240009 | 1..746 | 3730 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:41:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11348120..11348866 | 1..747 | 3735 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:42:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 11356218..11356964 | 1..747 | 3735 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 07:18:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 8435..8500 | 660..727 | 127 | 71 | Plus |
AT06648.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:18:56 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 11239264..11240009 | 1..746 | 94 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:54:09 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..612 | 86..697 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:57:01 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..612 | 86..697 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:39:51 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..612 | 86..697 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:50:22 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..612 | 86..697 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:31:02 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..612 | 86..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:36:45 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..746 | 1..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:57:01 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..746 | 1..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:39:51 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..746 | 1..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:50:22 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..746 | 1..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:31:02 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11756-RA | 1..746 | 1..746 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:56 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11348120..11348865 | 1..746 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:56 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11348120..11348865 | 1..746 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:18:56 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11348120..11348865 | 1..746 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:39:51 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11242153..11242898 | 1..746 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:22:15 Download gff for
AT06648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11356218..11356963 | 1..746 | 100 | | Plus |
AT06648.hyp Sequence
Translation from 85 to 696
> AT06648.hyp
MLKYLAGIFVSPRNDYANGRYRIPHPKKLAARRKSPPVNISTRSVINGGR
SANGRLKTENRNARRRREGNPHLTRPHSRSSQKTIGIRLDPISYIVNVPN
STSSPDDDEEEVPVPQLPNAVNKLKARTYRKENSDCLIPPPVSRVASWSG
PLNASPFNQLDEQNSISDDADAMGWKAICLPDDFWSEDSDSESKSKMSKI
NVF*
AT06648.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:52:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11756-PA | 203 | CG11756-PA | 1..203 | 1..203 | 1069 | 100 | Plus |
AT06648.pep Sequence
Translation from 85 to 696
> AT06648.pep
MLKYLAGIFVSPRNDYANGRYRIPHPKKLAARRKSPPVNISTRSVINGGR
SANGRLKTENRNARRRREGNPHLTRPHSRSSQKTIGIRLDPISYIVNVPN
STSSPDDDEEEVPVPQLPNAVNKLKARTYRKENSDCLIPPPVSRVASWSG
PLNASPFNQLDEQNSISDDADAMGWKAICLPDDFWSEDSDSESKSKMSKI
NVF*
AT06648.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:42:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18404-PA | 190 | GG18404-PA | 1..190 | 1..184 | 553 | 62.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11756-PA | 203 | CG11756-PA | 1..203 | 1..203 | 1069 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:42:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11470-PA | 203 | GM11470-PA | 1..203 | 1..203 | 889 | 83.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:42:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17012-PA | 203 | GD17012-PA | 1..203 | 1..203 | 897 | 84.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:42:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15923-PA | 205 | GE15923-PA | 1..203 | 1..196 | 569 | 64.3 | Plus |