Clone AT06856 Report

Search the DGRC for AT06856

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:68
Well:56
Vector:pOTB7
Associated Gene/TranscriptCG7311-RB
Protein status:AT06856.pep: wuzgold
Preliminary Size:2325
Sequenced Size:2260

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7311 2002-09-24 Blastp of sequenced clone
CG7311 2008-04-29 Release 5.5 accounting
CG7311 2008-08-15 Release 5.9 accounting
CG7311 2008-12-18 5.12 accounting

Clone Sequence Records

AT06856.complete Sequence

2260 bp (2260 high quality bases) assembled on 2002-09-24

GenBank Submission: BT001276

> AT06856.complete
ACCTTTTGAATATTTTTCGAAAATTTGGGAAGCGTTGGGAAAACGGCGCG
ACCCCTCAAAATTCGAAATTTTTGTTGTGTTGCTGCCTTTAATTAAAGGT
CCGATTAACTATGTCCAAGTTGGGTGCCATCCTGGCGCAAAGTGCTGTTC
ATCTCAGCGAGCATCGGCAGCTTTTGAGCCAGGCCTTCTTATCATCTATC
ACCTATCAACGGAGCCGGGTCAAGGTTCGCGGAAACCACTGTTGCGCAAT
GAAGGTGGTACCATCTCGCGCGGAGCACGTAAATGCACTGAAGGCCGAGG
AGTTCGACGTTCTGATCATCGGAGGAGGAGCCGTGGGTTGTGGTTGTGCT
GTAGACGCAGCGTGTCGTGGTCTTAAAACCGCCTTAATTGAGGCAGAGGA
TTTTGCAAGCGGCTCTAGTTCGCGAACCAGTAAGCTGATCGATGGCAGTG
GTTCATATCTGGGCACTGCCCTCCGGGAGAAGGATGTCGAACAGCTGTAC
ATTATGCTGCAAATGATGAGTGAACGGGTGACCATGCTGAAGAACGCTCC
GCATCTGAACCGCATCCAGCCCATGATCATACCCATCTACAGTTTTTTGC
AGATGCCCTGCACCTGGCTGGGATTGAAGCATCCAATATCCGCGGATCGC
ACATCATCTCCAGGGAGGCCACCATGTATGAGTTTCCGCTGCTAAAAACC
GATGGCCTTCGCGGTGGCGTCGTCTACTATGATGGTCAGGTGGATGATGC
CCGGATGTGCGTCGCATTGGTGATGACCGCGGTGGCCCTGGGCGCCAATG
TGGGCAACCACATGGAGGTGGTGGAGATTATGCCACAGGAGGGATGCTGC
CGAGTTGTTAGCGTTAAGGACAAGATCTCCTGCGAGCAGTTCTACATTCA
GTCCAAGGCCGTGATCAATGCCACAGGCTCCAGCACAGATGCCATCCGGC
AGATGGACAAGGAGGGAACCGCACCCATTCTATTGCCCACTCTGGAAACC
CAAGTATCCCTGCCCCGCTACTTTGGTTCCGGACATTACGGTTTGTTGAG
TCCGGCTCTGAAAAATGATGATCTCACTGTATATATGGTGCCGTTTGAGA
ACCACATGGTTCTAGGCAGTCGCGAAGTGGACCTCGATGAAGTGTCTAGC
CGTGGAAGTCCCACTCCCGATCCAGATGACGTGGATTGTCTGCTAGAAGC
AGCCAAGAAAAGGATGGATCCCTGCGTGGAGCTGGGGCGCTGTCACGTCC
TTAGTGCCTGGACGGCGATCAAGGCCAGTGTGAGCTGTCCAACCGACAAG
GAAAATGATGATGACAAGCGTGGAACACCGATCAACAGCTATATGATCGA
GGTTAGTCCCGACGGTCTTATCACGCTGGCCGGCGGACGGTGGAGCAGTT
ACCGCGTGATGGCAGCCGATGCCGTGGATTTGGCCATTAAATCTTGTGGA
CTATGCGACGATCATGTGACCTCCAGTTGGACACAGGACTTGAAGTTAGA
CGGAGCCGAATCATGGTGTTGCATGCTGCCGCTAGAATTCGTGCAGGACT
ACGGTGTGCCCATGGACGTGGCGCATCATATCTCCGATTCCTATGGGTAC
AATGGACATGCACTGTTCTCTCAGGCTCCTGATCTGAAGAAGCGCCTCCA
TCCGAGCTTCCCCTATATAGAGGCAGAGATTCAGTATGCCATGCGAAATG
AGTACGCCTGCACCCTTGTGGACATCATCGCACGACGGTTGCGCATAGCC
TTCGTGGATGCGGCCGCCACGCTGCACATGCTGCCTAGAATTCTCAAGAT
CATGGCCGGCGAGAATGGTTGGGATGAGGAAGAGCAAAAGGAGCAGATGG
TGGCGGCCCAGGAGTTTCTGGTGCGCCAAATGGGTCTGGGATCAATAGTC
CAACCCAGGAGCACCAGCAAGAGCAAGCCGAAAAAGAAGGGCTCCTCGGA
GGGATGTTGCTGCCGGGCGGCAGTTCGCAGGGGGGCCAGGAGCTACTCGA
TGGAAATATCAAAGAAGATTTGCGTTCAACCCTTGGTCCAACATAGATCC
ATGTCTAGCATGTTCTTGCCCCTTATGACGAGCTTAAGTTATGGACTCGG
ACGCTAATCGGTTGACATCGGACAGAAAGCGTTAACTAGCACTTGGCGCA
ACAAATTCATATGGTGAAATTTTTAAATAGCCAACGTTTCGTTGCGTGTG
GGTCTTTCTATACCATTAAATAAAGTTGGGAACAAAAAAAGCAAAAAAAA
AAAAAAAAAA

AT06856.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7311-RB 2303 CG7311-RB 53..2299 1..2247 11235 100 Plus
CG7311.a 2306 CG7311.a 53..2302 1..2247 11180 99.8 Plus
CG7311-RA 2565 CG7311-RA 702..2321 628..2247 8100 100 Plus
CG7311-RA 2565 CG7311-RA 53..681 1..629 3145 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13707633..13709247 628..2242 7940 99.4 Plus
chr2L 23010047 chr2L 13706931..13707559 1..629 3130 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:41:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13708969..13710588 628..2247 8100 100 Plus
2L 23513712 2L 13708267..13708895 1..629 3145 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13708969..13710588 628..2247 8100 100 Plus
2L 23513712 2L 13708267..13708895 1..629 3145 100 Plus
2R 25260384 2R 15861613..15861649 332..296 155 94.5 Minus
2R 25260384 2R 15860950..15860989 759..720 140 90 Minus
Blast to na_te.dros performed on 2019-03-16 05:56:02 has no hits.

AT06856.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:57:10 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13706931..13707559 1..629 99 -> Plus
chr2L 13707635..13709247 630..2242 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:54:18 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RA 1..519 111..629 100 -> Plus
CG7311-RA 542..2019 630..2107 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:13:59 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RA 1..519 111..629 100 -> Plus
CG7311-RA 542..2019 630..2107 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:22:42 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RD 1..381 249..629 100 -> Plus
CG7311-RD 404..1881 630..2107 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:05:01 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RA 1..519 111..629 100 -> Plus
CG7311-RA 542..2019 630..2107 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:11:46 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RD 1..381 249..629 100 -> Plus
CG7311-RD 404..1881 630..2107 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:36:56 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RB 53..2294 1..2242 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:13:59 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RB 53..2294 1..2242 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:42 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RE 53..2294 1..2242 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:05:01 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RB 53..2294 1..2242 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:11:46 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
CG7311-RE 53..2294 1..2242 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:10 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13708267..13708895 1..629 100 -> Plus
2L 13708971..13710583 630..2242 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:10 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13708267..13708895 1..629 100 -> Plus
2L 13708971..13710583 630..2242 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:10 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13708267..13708895 1..629 100 -> Plus
2L 13708971..13710583 630..2242 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:42 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13708267..13708895 1..629 100 -> Plus
arm_2L 13708971..13710583 630..2242 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:36:48 Download gff for AT06856.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13708267..13708895 1..629 100 -> Plus
2L 13708971..13710583 630..2242 100   Plus

AT06856.pep Sequence

Translation from 673 to 2106

> AT06856.pep
MYEFPLLKTDGLRGGVVYYDGQVDDARMCVALVMTAVALGANVGNHMEVV
EIMPQEGCCRVVSVKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTA
PILLPTLETQVSLPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSR
EVDLDEVSSRGSPTPDPDDVDCLLEAAKKRMDPCVELGRCHVLSAWTAIK
ASVSCPTDKENDDDKRGTPINSYMIEVSPDGLITLAGGRWSSYRVMAADA
VDLAIKSCGLCDDHVTSSWTQDLKLDGAESWCCMLPLEFVQDYGVPMDVA
HHISDSYGYNGHALFSQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTLVD
IIARRLRIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFLV
RQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRRGARSYSMEISKKIC
VQPLVQHRSMSSMFLPLMTSLSYGLGR*

AT06856.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22995-PA 732 GF22995-PA 210..654 1..442 1696 69 Plus
Dana\GF13366-PA 726 GF13366-PA 199..600 4..404 778 40 Plus
Dana\GF13183-PA 714 GF13183-PA 189..587 4..404 665 33.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23871-PA 650 GG23871-PA 194..644 1..469 2148 89.8 Plus
Dere\GG22328-PA 725 GG22328-PA 198..599 4..404 776 40 Plus
Dere\GG23286-PA 713 GG23286-PA 188..586 4..404 660 34.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12999-PA 713 GH12999-PA 190..582 1..410 951 47.3 Plus
Dgri\GH21279-PA 726 GH21279-PA 199..600 4..404 761 39.2 Plus
Dgri\GH20102-PA 711 GH20102-PA 186..593 4..415 622 33 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:18
Subject Length Description Subject Range Query Range Score Percent Strand
Gpo3-PD 626 CG7311-PD 150..626 1..477 2504 100 Plus
Gpo1-PD 724 CG8256-PD 198..599 4..404 754 39.7 Plus
Gpo1-PA 724 CG8256-PA 198..599 4..404 754 39.7 Plus
Gpo1-PB 724 CG8256-PB 198..599 4..404 754 39.7 Plus
Gpo1-PC 724 CG8256-PC 198..599 4..404 754 39.7 Plus
Gpo2-PA 713 CG2137-PA 188..586 4..404 621 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19104-PA 726 GI19104-PA 199..600 4..404 775 40.2 Plus
Dmoj\GI18998-PA 710 GI18998-PA 185..588 4..411 651 35 Plus
Dmoj\GI17672-PA 608 GI17672-PA 189..439 1..256 595 46.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26078-PA 777 GL26078-PA 221..698 3..453 1292 53.3 Plus
Dper\GL11848-PA 726 GL11848-PA 199..600 4..404 772 39.5 Plus
Dper\GL20015-PA 715 GL20015-PA 188..589 4..404 645 33.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20252-PA 745 GA20252-PA 184..666 3..453 1276 52.8 Plus
Dpse\GA20935-PA 726 GA20935-PA 199..600 4..404 772 39.5 Plus
Dpse\GA15262-PA 715 GA15262-PA 188..589 4..404 636 32.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10691-PA 672 GM10691-PA 196..672 1..477 2520 97.1 Plus
Dsec\GM20116-PA 725 GM20116-PA 198..599 4..404 776 39.7 Plus
Dsec\GM20962-PA 669 GM20962-PA 144..542 4..404 647 33.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23915-PA 672 GD23915-PA 196..672 1..477 2523 97.1 Plus
Dsim\GD25593-PA 731 GD25593-PA 198..605 4..404 757 39.4 Plus
Dsim\GD10489-PA 703 GD10489-PA 188..576 4..404 601 32.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17868-PA 1153 GJ17868-PA 189..609 1..421 1069 48.1 Plus
Dvir\GJ22234-PA 726 GJ22234-PA 199..600 4..404 778 40.4 Plus
Dvir\GJ19963-PA 711 GJ19963-PA 186..582 4..404 654 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24507-PA 706 GK24507-PA 151..565 1..409 1348 60.3 Plus
Dwil\GK20797-PA 726 GK20797-PA 199..600 4..404 769 39.5 Plus
Dwil\GK10696-PA 720 GK10696-PA 191..592 4..404 652 36.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18674-PA 652 GE18674-PA 194..648 1..455 2135 91.9 Plus
Dyak\GE14126-PA 725 GE14126-PA 198..599 4..404 776 40 Plus
Dyak\GE19132-PA 713 GE19132-PA 188..586 4..404 656 34 Plus

AT06856.hyp Sequence

Translation from 673 to 2106

> AT06856.hyp
MYEFPLLKTDGLRGGVVYYDGQVDDARMCVALVMTAVALGANVGNHMEVV
EIMPQEGCCRVVSVKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTA
PILLPTLETQVSLPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSR
EVDLDEVSSRGSPTPDPDDVDCLLEAAKKRMDPCVELGRCHVLSAWTAIK
ASVSCPTDKENDDDKRGTPINSYMIEVSPDGLITLAGGRWSSYRVMAADA
VDLAIKSCGLCDDHVTSSWTQDLKLDGAESWCCMLPLEFVQDYGVPMDVA
HHISDSYGYNGHALFSQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTLVD
IIARRLRIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFLV
RQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRRGARSYSMEISKKIC
VQPLVQHRSMSSMFLPLMTSLSYGLGR*

AT06856.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:52:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7311-PD 626 CG7311-PD 150..626 1..477 2504 100 Plus
Gpo-1-PD 724 CG8256-PD 198..599 4..404 754 39.7 Plus
Gpo-1-PA 724 CG8256-PA 198..599 4..404 754 39.7 Plus
Gpo-1-PB 724 CG8256-PB 198..599 4..404 754 39.7 Plus
Gpo-1-PC 724 CG8256-PC 198..599 4..404 754 39.7 Plus