BDGP Sequence Production Resources |
Search the DGRC for AT07283
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 72 |
Well: | 83 |
Vector: | pOTB7 |
Associated Gene/Transcript | Fancl-RA |
Protein status: | AT07283.pep: gold |
Preliminary Size: | 1143 |
Sequenced Size: | 1244 |
Gene | Date | Evidence |
---|---|---|
CG12812 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12812 | 2002-01-03 | Blastp of sequenced clone |
CG12812 | 2003-01-01 | Sim4 clustering to Release 3 |
Fancl | 2008-04-29 | Release 5.5 accounting |
Fancl | 2008-08-15 | Release 5.9 accounting |
CG3925 | 2008-08-15 | Release 5.9 accounting |
Fancl | 2008-12-18 | 5.12 accounting |
CG3925 | 2008-12-18 | 5.12 accounting |
1244 bp (1244 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075174
> AT07283.complete CAAAAGTCATTCAAGCACAATCTGACCAAAATCAAATATAATGGAAAGTA ACGAAGATGTAGAGCGCCTTCTGTGTCAAAAGTATCCTGGTCTGGCAGCG GAGCTTCAGCCAAGTGGAGCGTGCATCATCAGAGGAGTTTTGGGCAGTGA GGATACATGGCGCCGCCTTAAACTCTATCTGCCACACCACCCAGCTCTTC ATGGTTTCCAGCTCTACGTCCAGGAAAGCTTGGAGTACAAGCTGTACACA TCGGCTAATCTCAAGTTACAGGACGATTGGCTGCTGGAGGATTTTCTGGA CCATTTGCCAAAGATTCTTCCTGCCCAAAAAGCCCCAACAGTGCCAAAGG AACTATGTCGGGAGGGGAACATATATTACGATATCCTGGCCTTGTACAAG TCAAACGAGTACTGCCTGCAAGTGGACGAGGCCTGTTCCATGATTCGTTT CAGCGAATTCACCGACTTCGAGCAGCATTATCTGGAGCTTAAGATCCCGT CTCTTCTCTTGCTTGATCACAGTTTGCCCGACTGCGTATCGCTGGGTGAA ATGCTGACCAAGAGTGCTGGAAACCTAGAGGAGGCCCTAAACCTCTTTCG CAAGCTTCTCGAGGATCTGCGTCCCTTCTACGACAACTTCATGGATATCG ACGAGCTTTGTCATGTGCTGCAACCATCGCCCATCAGCAGCAAACACAAA ACACGACTGTTCCCTCTCAAGGATCGCGTCTACTTGAAGCTGACCATCGC GGATCCCTTTGCCTGCATTGCATCCATGTCGCTAAAGATCATTGGGCCCA CGGAAGAGGTGGCCCGCCTGCGCCACGTTCTCAGCGATGGTCTAAGTAAC TGGGACTCCGAAATGAACATTCACAAGAACCTACTCCGAATGTTCGACTT GTGCTACTTTCCCATGCCAGACTGGTCGGATGGACCCAAGCTGGATGAAG AGGACAACGAAGAGCTGCGCTGTAACATTTGCTTTGCCTATCGCCTGGAT GGTGGCGAGGTGCCCCTCGTCTCCTGCGACAATGCCAAATGTGTGCTAAA GTGCCATGCCGTCTGTTTGGAGGAGTGGTTTAAGACTCTGATGGATGGCA AGACCTTTCTGGAGGTCTCCTTCGGCCAGTGTCCCTTCTGCAAGGCGAAG CTGTCCACCTCATTTGCGGCACTTTTAAATGATTGAAATTTGTAACCATA ATATTAAAAGCAAATATTTAAGAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5877412..5878409 | 1147..150 | 4990 | 100 | Minus |
chr3R | 27901430 | chr3R | 5878464..5878615 | 152..1 | 760 | 100 | Minus |
chr3R | 27901430 | chr3R | 5877277..5877355 | 1225..1147 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10051643..10052640 | 1147..150 | 4990 | 100 | Minus |
3R | 32079331 | 3R | 10052695..10052846 | 152..1 | 760 | 100 | Minus |
3R | 32079331 | 3R | 10051506..10051586 | 1227..1147 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9792474..9793471 | 1147..150 | 4990 | 100 | Minus |
3R | 31820162 | 3R | 9793526..9793677 | 152..1 | 760 | 100 | Minus |
3R | 31820162 | 3R | 9792337..9792417 | 1227..1147 | 405 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5877277..5877354 | 1148..1225 | 100 | <- | Minus |
chr3R | 5877412..5878407 | 152..1147 | 100 | <- | Minus |
chr3R | 5878465..5878615 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1146 | 41..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1146 | 41..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1146 | 41..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1146 | 41..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1146 | 41..1186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1225 | 1..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 18..1242 | 1..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 24..1248 | 1..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 1..1225 | 1..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fancl-RA | 24..1248 | 1..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10051508..10051585 | 1148..1225 | 100 | <- | Minus |
3R | 10051643..10052638 | 152..1147 | 100 | <- | Minus |
3R | 10052696..10052846 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10051508..10051585 | 1148..1225 | 100 | <- | Minus |
3R | 10051643..10052638 | 152..1147 | 100 | <- | Minus |
3R | 10052696..10052846 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10051508..10051585 | 1148..1225 | 100 | <- | Minus |
3R | 10051643..10052638 | 152..1147 | 100 | <- | Minus |
3R | 10052696..10052846 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5877230..5877307 | 1148..1225 | 100 | <- | Minus |
arm_3R | 5877365..5878360 | 152..1147 | 100 | <- | Minus |
arm_3R | 5878418..5878568 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9792474..9793469 | 152..1147 | 100 | <- | Minus |
3R | 9793527..9793677 | 1..151 | 100 | Minus | |
3R | 9792339..9792416 | 1148..1225 | 100 | <- | Minus |
Translation from 40 to 1185
> AT07283.hyp MESNEDVERLLCQKYPGLAAELQPSGACIIRGVLGSEDTWRRLKLYLPHH PALHGFQLYVQESLEYKLYTSANLKLQDDWLLEDFLDHLPKILPAQKAPT VPKELCREGNIYYDILALYKSNEYCLQVDEACSMIRFSEFTDFEQHYLEL KIPSLLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYDNF MDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTIADPFACIASMSLKI IGPTEEVARLRHVLSDGLSNWDSEMNIHKNLLRMFDLCYFPMPDWSDGPK LDEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTL MDGKTFLEVSFGQCPFCKAKLSTSFAALLND*
Translation from 40 to 1185
> AT07283.pep MESNEDVERLLCQKYPGLAAELQPSGACIIRGVLGSEDTWRRLKLYLPHH PALHGFQLYVQESLEYKLYTSANLKLQDDWLLEDFLDHLPKILPAQKAPT VPKELCREGNIYYDILALYKSNEYCLQVDEACSMIRFSEFTDFEQHYLEL KIPSLLLLDHSLPDCVSLGEMLTKSAGNLEEALNLFRKLLEDLRPFYDNF MDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTIADPFACIASMSLKI IGPTEEVARLRHVLSDGLSNWDSEMNIHKNLLRMFDLCYFPMPDWSDGPK LDEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTL MDGKTFLEVSFGQCPFCKAKLSTSFAALLND*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17137-PA | 387 | GF17137-PA | 7..387 | 3..381 | 1420 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17306-PA | 382 | GG17306-PA | 6..382 | 5..381 | 1784 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17888-PA | 413 | GH17888-PA | 47..413 | 11..381 | 1187 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fancl-PA | 381 | CG12812-PA | 1..381 | 1..381 | 2043 | 100 | Plus |
Fancl-PB | 380 | CG12812-PB | 1..380 | 1..381 | 2026 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24447-PA | 376 | GI24447-PA | 5..376 | 6..381 | 1158 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27281-PA | 381 | GL27281-PA | 5..379 | 4..380 | 1424 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11825-PA | 381 | GA11825-PA | 5..379 | 4..380 | 1430 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26190-PA | 382 | GM26190-PA | 2..382 | 1..381 | 1953 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20739-PA | 381 | GD20739-PA | 1..381 | 1..381 | 1918 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10724-PA | 379 | GJ10724-PA | 7..379 | 6..381 | 1192 | 59.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11033-PA | 387 | GK11033-PA | 4..387 | 3..381 | 1240 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24708-PA | 382 | GE24708-PA | 6..382 | 5..381 | 1760 | 92 | Plus |