Clone AT07436 Report

Search the DGRC for AT07436

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:74
Well:36
Vector:pOTB7
Associated Gene/TranscriptCG16758-RF
Protein status:AT07436.pep: gold
Sequenced Size:1252

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16758-RF 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

AT07436.complete Sequence

1252 bp assembled on 2010-11-23

GenBank Submission: BT125786.1

> AT07436.complete
CCAAATTCAGGCACAGACTCCATCCAAAATTCGCTGCCTAGTACGTAGTT
GTAAGGGCTAAGACCTCCAACTAACCCGCAGAATGTGCTCCCGCGACTGT
TGCTCCGGACCAGGTGGCTCCAATCGAGGCAACACTTGCTCGGACAAGAA
GGGCGCCAAGGCCGGCAGTCTCACTGGCGAGAAGATCATACCCACTCCAC
AGAGCCTGCTGTATCCCTATGAGGTCATCGAGGAGATCGCCGACTTCATT
ACCAAGGGGTCCGGCATGCGCCCCAAGATCGGCATCATCTGCGGCTCTGG
GCTAGGCTCATTGGCCGATATGATCCAGGACCCGAAGATCTTCGAGTATG
AGAAGATCCCCAACTTCCCGGTATCTACAGTTGAGGGCCATGCCGGACGA
CTGGTGGTCGGCACACTCGAGGGCGCCACTGTGATGGCGATGCAGGGCAG
GTTCCACTTCTACGAGGGCTATCCGCTGGCCAAGTGCTCAATGCCGGTTC
GCGTGATGAAGCTGTGCGGTGTGGAATACCTGTTCGCCACCAATGCGGCT
GGTGGAATCAATCCACGGTTCGCGGTGGGCGACATCATGCTGATGCATGA
CCATGTCAACATGCTGGGCTTTGCCGGAAATTCTCCGCTCCAGGGACCCA
ATGACCCACGCTTCGGACCCCGCTTTCCCGCCCTGGTGAACTCGTACAAC
AAGGACCTAATCAACAAGGCCATCGAGATCGCCAAGGCCATGGGCATAGA
GTCCAACATTCACGTCGGCGTATACTCCTGTCTGGGTGGTCCCAACTACG
AGACCATCGCCGAGCTGAAGGCCCTGCGCATGATGGGCGTGGATGCGGTG
GGCATGTCCACCGTACATGAGGTCATCACTGCACGGCACTGCGACATGAA
GGTATTCGCCTTCAGCCTCATCACAAATAAGTGCGCCACCGAGTACAGCG
ATAAGAAGGACGATGAGGCCAACCACGATGAGGTTATGGCTGTGGCCAAG
AACAGGCAAAAGGCCTGCTGCGAACTGGTCTCCCGACTCATCCGGGAAAT
CCACTTGGCATCCGCTTAAGTAGCGAAGCGAAGAAGTAGCGTTGGATTCT
AAATTTAAAAATAGTTAATTCTCTGAGCTCGCATCTAAGACTCACATGAC
ACGGATTGTCCAAAATCTTACAGTATAGGCCTAGGGAATAGTTTAACTAA
ATTATGTAAAATAAACTAGCTATATCACAATTTCAAAAAAAAAAAAAAAA
AA

AT07436.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2499201..2499974 984..211 3870 100 Minus
chr3L 24539361 chr3L 2498884..2499137 1234..981 1270 100 Minus
chr3L 24539361 chr3L 2502104..2502316 213..1 1035 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2499689..2500462 984..211 3870 100 Minus
3L 28110227 3L 2499371..2499625 1235..981 1275 100 Minus
3L 28110227 3L 2502592..2502804 213..1 1065 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:03:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 2499689..2500462 984..211 3870 100 Minus
3L 28103327 3L 2499371..2499625 1235..981 1275 100 Minus
3L 28103327 3L 2502592..2502804 213..1 1065 100 Minus
Blast to na_te.dros performed on 2019-03-17 01:12:18 has no hits.

AT07436.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:13:14 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2498884..2499135 983..1234 100 <- Minus
chr3L 2499203..2499974 211..982 100 <- Minus
chr3L 2502107..2502316 1..210 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-11-23 15:28:02 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 1..987 83..1069 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:44:29 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 1..987 83..1069 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:32:02 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RG 124..1119 73..1069 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:51:38 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RG 124..1119 73..1069 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-23 15:28:02 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 12..1245 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:44:29 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 12..1245 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:32:02 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 12..1245 1..1234 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:51:38 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
CG16758-RF 12..1245 1..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:14 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2499372..2499623 983..1234 100 <- Minus
3L 2499691..2500462 211..982 100 <- Minus
3L 2502595..2502804 1..210 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:14 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2499372..2499623 983..1234 100 <- Minus
3L 2499691..2500462 211..982 100 <- Minus
3L 2502595..2502804 1..210 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:14 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2499372..2499623 983..1234 100 <- Minus
3L 2499691..2500462 211..982 100 <- Minus
3L 2502595..2502804 1..210 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:32:02 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2499372..2499623 983..1234 100 <- Minus
arm_3L 2499691..2500462 211..982 100 <- Minus
arm_3L 2502595..2502804 1..210 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:51:41 Download gff for AT07436.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2499372..2499623 983..1234 100 <- Minus
3L 2499691..2500462 211..982 100 <- Minus
3L 2502595..2502804 1..210 100   Minus

AT07436.hyp Sequence

Translation from 82 to 1068

> AT07436.hyp
MCSRDCCSGPGGSNRGNTCSDKKGAKAGSLTGEKIIPTPQSLLYPYEVIE
EIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTV
EGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKLCGVEYL
FATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPA
LVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRM
MGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDE
VMAVAKNRQKACCELVSRLIREIHLASA*

AT07436.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG16758-PF 328 CG16758-PF 1..328 1..328 1729 100 Plus
CG16758-PG 372 CG16758-PG 45..372 1..328 1729 100 Plus
CG16758-PH 396 CG16758-PH 45..396 1..328 1694 93.2 Plus
CG16758-PE 321 CG16758-PE 1..321 1..328 1561 91.8 Plus
CG16758-PD 329 CG16758-PD 13..329 8..328 1497 91 Plus

AT07436.pep Sequence

Translation from 82 to 1068

> AT07436.pep
MCSRDCCSGPGGSNRGNTCSDKKGAKAGSLTGEKIIPTPQSLLYPYEVIE
EIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTV
EGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKLCGVEYL
FATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPA
LVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRM
MGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDE
VMAVAKNRQKACCELVSRLIREIHLASA*

AT07436.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24862-PA 418 GF24862-PA 39..417 1..328 1558 78.7 Plus
Dana\GF11825-PA 337 GF11825-PA 1..327 1..324 670 40.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14512-PA 351 GG14512-PA 67..350 44..327 1502 98.2 Plus
Dere\GG20005-PA 338 GG20005-PA 1..336 1..325 682 41.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15756-PA 390 GH15756-PA 41..387 1..324 1482 80.3 Plus
Dgri\GH20577-PA 323 GH20577-PA 1..320 1..324 771 46 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG16758-PG 372 CG16758-PG 45..372 1..328 1729 100 Plus
CG16758-PF 328 CG16758-PF 1..328 1..328 1729 100 Plus
CG16758-PH 396 CG16758-PH 45..396 1..328 1694 93.2 Plus
CG16758-PE 321 CG16758-PE 1..321 1..328 1561 91.8 Plus
CG16758-PD 329 CG16758-PD 13..329 8..328 1497 91 Plus
CG16758-PB 353 CG16758-PB 69..353 44..328 1494 100 Plus
CG18128-PA 339 CG18128-PA 1..337 1..325 672 41.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12534-PA 392 GI12534-PA 42..389 1..324 1491 81.2 Plus
Dmoj\GI19771-PA 323 GI19771-PA 1..320 1..324 704 41.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17590-PA 330 GL17590-PA 1..327 1..324 775 47.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14131-PA 396 GA14131-PA 47..396 1..327 1476 81.5 Plus
Dpse\GA14805-PA 333 GA14805-PA 1..330 1..324 764 47.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14117-PA 396 GM14117-PA 45..396 1..328 1694 90.9 Plus
Dsec\GM15517-PA 339 GM15517-PA 1..337 1..325 672 40.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13387-PA 396 GD13387-PA 45..396 1..328 1697 91.2 Plus
Dsim\GD25021-PA 339 GD25021-PA 1..337 1..325 679 41.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16051-PA 408 GJ16051-PA 59..408 1..327 1517 82.2 Plus
Dvir\GJ18292-PA 325 GJ18292-PA 1..322 1..324 794 48.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12508-PA 413 GK12508-PA 60..413 1..327 1556 82.6 Plus
Dwil\GK23168-PA 324 GK23168-PA 35..321 33..324 765 49 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21703-PA 394 GE21703-PA 43..394 1..328 1691 90.9 Plus
Dyak\GE11540-PA 335 GE11540-PA 1..333 1..325 691 41.5 Plus