BDGP Sequence Production Resources |
Search the DGRC for AT07436
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 74 |
Well: | 36 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG16758-RF |
Protein status: | AT07436.pep: gold |
Sequenced Size: | 1252 |
Gene | Date | Evidence |
---|---|---|
CG16758-RF | 2010-11-11 | Gleaning Pick By Joe Carlson |
1252 bp assembled on 2010-11-23
GenBank Submission: BT125786.1
> AT07436.complete CCAAATTCAGGCACAGACTCCATCCAAAATTCGCTGCCTAGTACGTAGTT GTAAGGGCTAAGACCTCCAACTAACCCGCAGAATGTGCTCCCGCGACTGT TGCTCCGGACCAGGTGGCTCCAATCGAGGCAACACTTGCTCGGACAAGAA GGGCGCCAAGGCCGGCAGTCTCACTGGCGAGAAGATCATACCCACTCCAC AGAGCCTGCTGTATCCCTATGAGGTCATCGAGGAGATCGCCGACTTCATT ACCAAGGGGTCCGGCATGCGCCCCAAGATCGGCATCATCTGCGGCTCTGG GCTAGGCTCATTGGCCGATATGATCCAGGACCCGAAGATCTTCGAGTATG AGAAGATCCCCAACTTCCCGGTATCTACAGTTGAGGGCCATGCCGGACGA CTGGTGGTCGGCACACTCGAGGGCGCCACTGTGATGGCGATGCAGGGCAG GTTCCACTTCTACGAGGGCTATCCGCTGGCCAAGTGCTCAATGCCGGTTC GCGTGATGAAGCTGTGCGGTGTGGAATACCTGTTCGCCACCAATGCGGCT GGTGGAATCAATCCACGGTTCGCGGTGGGCGACATCATGCTGATGCATGA CCATGTCAACATGCTGGGCTTTGCCGGAAATTCTCCGCTCCAGGGACCCA ATGACCCACGCTTCGGACCCCGCTTTCCCGCCCTGGTGAACTCGTACAAC AAGGACCTAATCAACAAGGCCATCGAGATCGCCAAGGCCATGGGCATAGA GTCCAACATTCACGTCGGCGTATACTCCTGTCTGGGTGGTCCCAACTACG AGACCATCGCCGAGCTGAAGGCCCTGCGCATGATGGGCGTGGATGCGGTG GGCATGTCCACCGTACATGAGGTCATCACTGCACGGCACTGCGACATGAA GGTATTCGCCTTCAGCCTCATCACAAATAAGTGCGCCACCGAGTACAGCG ATAAGAAGGACGATGAGGCCAACCACGATGAGGTTATGGCTGTGGCCAAG AACAGGCAAAAGGCCTGCTGCGAACTGGTCTCCCGACTCATCCGGGAAAT CCACTTGGCATCCGCTTAAGTAGCGAAGCGAAGAAGTAGCGTTGGATTCT AAATTTAAAAATAGTTAATTCTCTGAGCTCGCATCTAAGACTCACATGAC ACGGATTGTCCAAAATCTTACAGTATAGGCCTAGGGAATAGTTTAACTAA ATTATGTAAAATAAACTAGCTATATCACAATTTCAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2499201..2499974 | 984..211 | 3870 | 100 | Minus |
chr3L | 24539361 | chr3L | 2498884..2499137 | 1234..981 | 1270 | 100 | Minus |
chr3L | 24539361 | chr3L | 2502104..2502316 | 213..1 | 1035 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2499689..2500462 | 984..211 | 3870 | 100 | Minus |
3L | 28110227 | 3L | 2499371..2499625 | 1235..981 | 1275 | 100 | Minus |
3L | 28110227 | 3L | 2502592..2502804 | 213..1 | 1065 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2499689..2500462 | 984..211 | 3870 | 100 | Minus |
3L | 28103327 | 3L | 2499371..2499625 | 1235..981 | 1275 | 100 | Minus |
3L | 28103327 | 3L | 2502592..2502804 | 213..1 | 1065 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2498884..2499135 | 983..1234 | 100 | <- | Minus |
chr3L | 2499203..2499974 | 211..982 | 100 | <- | Minus |
chr3L | 2502107..2502316 | 1..210 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 1..987 | 83..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 1..987 | 83..1069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RG | 124..1119 | 73..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RG | 124..1119 | 73..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 12..1245 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 12..1245 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 12..1245 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16758-RF | 12..1245 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499372..2499623 | 983..1234 | 100 | <- | Minus |
3L | 2499691..2500462 | 211..982 | 100 | <- | Minus |
3L | 2502595..2502804 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499372..2499623 | 983..1234 | 100 | <- | Minus |
3L | 2499691..2500462 | 211..982 | 100 | <- | Minus |
3L | 2502595..2502804 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499372..2499623 | 983..1234 | 100 | <- | Minus |
3L | 2499691..2500462 | 211..982 | 100 | <- | Minus |
3L | 2502595..2502804 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2499372..2499623 | 983..1234 | 100 | <- | Minus |
arm_3L | 2499691..2500462 | 211..982 | 100 | <- | Minus |
arm_3L | 2502595..2502804 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2499372..2499623 | 983..1234 | 100 | <- | Minus |
3L | 2499691..2500462 | 211..982 | 100 | <- | Minus |
3L | 2502595..2502804 | 1..210 | 100 | Minus |
Translation from 82 to 1068
> AT07436.hyp MCSRDCCSGPGGSNRGNTCSDKKGAKAGSLTGEKIIPTPQSLLYPYEVIE EIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTV EGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKLCGVEYL FATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPA LVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRM MGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDE VMAVAKNRQKACCELVSRLIREIHLASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PF | 328 | CG16758-PF | 1..328 | 1..328 | 1729 | 100 | Plus |
CG16758-PG | 372 | CG16758-PG | 45..372 | 1..328 | 1729 | 100 | Plus |
CG16758-PH | 396 | CG16758-PH | 45..396 | 1..328 | 1694 | 93.2 | Plus |
CG16758-PE | 321 | CG16758-PE | 1..321 | 1..328 | 1561 | 91.8 | Plus |
CG16758-PD | 329 | CG16758-PD | 13..329 | 8..328 | 1497 | 91 | Plus |
Translation from 82 to 1068
> AT07436.pep MCSRDCCSGPGGSNRGNTCSDKKGAKAGSLTGEKIIPTPQSLLYPYEVIE EIADFITKGSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTV EGHAGRLVVGTLEGATVMAMQGRFHFYEGYPLAKCSMPVRVMKLCGVEYL FATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPA LVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRM MGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDE VMAVAKNRQKACCELVSRLIREIHLASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24862-PA | 418 | GF24862-PA | 39..417 | 1..328 | 1558 | 78.7 | Plus |
Dana\GF11825-PA | 337 | GF11825-PA | 1..327 | 1..324 | 670 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14512-PA | 351 | GG14512-PA | 67..350 | 44..327 | 1502 | 98.2 | Plus |
Dere\GG20005-PA | 338 | GG20005-PA | 1..336 | 1..325 | 682 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15756-PA | 390 | GH15756-PA | 41..387 | 1..324 | 1482 | 80.3 | Plus |
Dgri\GH20577-PA | 323 | GH20577-PA | 1..320 | 1..324 | 771 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16758-PG | 372 | CG16758-PG | 45..372 | 1..328 | 1729 | 100 | Plus |
CG16758-PF | 328 | CG16758-PF | 1..328 | 1..328 | 1729 | 100 | Plus |
CG16758-PH | 396 | CG16758-PH | 45..396 | 1..328 | 1694 | 93.2 | Plus |
CG16758-PE | 321 | CG16758-PE | 1..321 | 1..328 | 1561 | 91.8 | Plus |
CG16758-PD | 329 | CG16758-PD | 13..329 | 8..328 | 1497 | 91 | Plus |
CG16758-PB | 353 | CG16758-PB | 69..353 | 44..328 | 1494 | 100 | Plus |
CG18128-PA | 339 | CG18128-PA | 1..337 | 1..325 | 672 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12534-PA | 392 | GI12534-PA | 42..389 | 1..324 | 1491 | 81.2 | Plus |
Dmoj\GI19771-PA | 323 | GI19771-PA | 1..320 | 1..324 | 704 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17590-PA | 330 | GL17590-PA | 1..327 | 1..324 | 775 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14131-PA | 396 | GA14131-PA | 47..396 | 1..327 | 1476 | 81.5 | Plus |
Dpse\GA14805-PA | 333 | GA14805-PA | 1..330 | 1..324 | 764 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14117-PA | 396 | GM14117-PA | 45..396 | 1..328 | 1694 | 90.9 | Plus |
Dsec\GM15517-PA | 339 | GM15517-PA | 1..337 | 1..325 | 672 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13387-PA | 396 | GD13387-PA | 45..396 | 1..328 | 1697 | 91.2 | Plus |
Dsim\GD25021-PA | 339 | GD25021-PA | 1..337 | 1..325 | 679 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16051-PA | 408 | GJ16051-PA | 59..408 | 1..327 | 1517 | 82.2 | Plus |
Dvir\GJ18292-PA | 325 | GJ18292-PA | 1..322 | 1..324 | 794 | 48.3 | Plus |