Clone AT07524 Report

Search the DGRC for AT07524

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:75
Well:24
Vector:pOTB7
Associated Gene/TranscriptCG7551-RB
Protein status:AT07524.pep: gold
Preliminary Size:828
Sequenced Size:1178

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7551 2002-01-01 Sim4 clustering to Release 2
CG7551 2002-02-22 Blastp of sequenced clone
CG7551 2003-01-01 Sim4 clustering to Release 3
CG7551 2008-04-29 Release 5.5 accounting
CG7551 2008-08-15 Release 5.9 accounting
CG7551 2008-12-18 5.12 accounting

Clone Sequence Records

AT07524.complete Sequence

1178 bp (1178 high quality bases) assembled on 2002-02-22

GenBank Submission: AY084103

> AT07524.complete
ATCATATCAGCCACGTACTTTTTGGAAAACTGATTTTAAAAAATTTTAAA
TTTTAAAAGCAATATTCAATATGACTCAATATGGCCACAAACTGAGCTGG
GCTGTTGGCAAAAAGACGGTGTTGTGCATCGGCACAACGACCATTGACTT
TGTCTCGACCATAAAACGTTTTCCCGAGGAGAACTCACATCAGAAGGTCA
TTGGAGGATACTGGATTCGCGGTGGCAAGGCCTCGAACAACTGTACTGTT
TTGGCCAATCTGGGCGTCAAAGTGGAGTTCCTAGGAATGCTGAGCAGTTG
GAGTGTGTTTCAAGTTCTGGTCGATGACTTGAAGAGTCGTGGCATCATTA
TCGACAACTGTCCAACCTGTGACCAGGGTGCACCCTTCTCATCCGTGATA
CTCACCAAGGCGACTAAGACGCGGAACATTGTCTATTGCAATAATAACTT
CCCGTACGTTAGCATTGATGATTTCCGAAAGCTGAACCTTAACCAATATG
GATGGATTCACATTCGGGCACTATACTTTGATAAGTCATTGCCGATGGTC
AAGGACATAGAGGCATATAATGCGAACAGAAAGGAGAAGATCGTACTATC
GATGGAGTTCGATAACAACCTGGATGACATGTGGCCTCTGATGGATTACT
GTGACTATGCCGTATTCTCTAAGAAGTTGGCCCAACCGAATGGTTGGGTT
TCTCTGGAGGATGCCTGCATGCAGCTGGACGAGCGATTGCGAATGCGTTG
GGGCCTTAATCTCAAGCGACCATATGTGGTCGTCCTTTGGGGCGATCAGG
GTGCCGGCATCTTGGATCTCAATGGTAACTTCACCCACGTCAAGCCGCAC
AAGCCCAAACGCATCGTGGACGCCTTGGGAGCAGGAGACACCTTCGTGGG
CGCTTTCATCTACGCCCTCTATATCCGGGAAAGATCCGTTTCAGTTGCCG
TGGACTTTGGCAATCGCATGGCCAGCTACAAGTGCACGAAAAATGGGTAC
GATCATATCGCTAACATTTTACTGCCTCCGATCTTATAATTGGGTCGAAA
TTGAATTTCTCATTTCGAAAATTTTTCAGAAAACAGATCAAAAGAATGAG
GCTGTAGTTAAAATAAAAATCTCCTCTTGGACTTCGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT07524.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7551-RB 1136 CG7551-RB 1..1136 1..1136 5680 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11449267..11450402 1..1136 5665 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:42:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11458490..11459626 1..1137 5685 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11451590..11452726 1..1137 5685 100 Plus
Blast to na_te.dros performed on 2019-03-16 00:07:34 has no hits.

AT07524.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:08:17 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11449267..11450402 1..1136 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:54:59 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..969 71..1039 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:42:57 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..969 71..1039 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:55:13 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..969 71..1039 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:35 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..969 71..1039 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:58:51 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..969 71..1039 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:37 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..1136 1..1136 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:42:57 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..1136 1..1136 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:55:13 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..1136 1..1136 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:35 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..1136 1..1136 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:58:51 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
CG7551-RB 1..1136 1..1136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:17 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11458490..11459625 1..1136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:17 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11458490..11459625 1..1136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:08:17 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11458490..11459625 1..1136 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:55:13 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11451590..11452725 1..1136 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:46:04 Download gff for AT07524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11451590..11452725 1..1136 100   Plus

AT07524.pep Sequence

Translation from 70 to 1038

> AT07524.pep
MTQYGHKLSWAVGKKTVLCIGTTTIDFVSTIKRFPEENSHQKVIGGYWIR
GGKASNNCTVLANLGVKVEFLGMLSSWSVFQVLVDDLKSRGIIIDNCPTC
DQGAPFSSVILTKATKTRNIVYCNNNFPYVSIDDFRKLNLNQYGWIHIRA
LYFDKSLPMVKDIEAYNANRKEKIVLSMEFDNNLDDMWPLMDYCDYAVFS
KKLAQPNGWVSLEDACMQLDERLRMRWGLNLKRPYVVVLWGDQGAGILDL
NGNFTHVKPHKPKRIVDALGAGDTFVGAFIYALYIRERSVSVAVDFGNRM
ASYKCTKNGYDHIANILLPPIL*

AT07524.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25264-PA 327 GF25264-PA 6..327 3..322 1027 57.5 Plus
Dana\GF24486-PA 305 GF24486-PA 5..303 15..317 706 41.3 Plus
Dana\GF24552-PA 375 GF24552-PA 11..314 15..316 586 35.9 Plus
Dana\GF24487-PA 373 GF24487-PA 33..358 14..311 306 27.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15503-PA 322 GG15503-PA 1..322 1..322 1557 87.6 Plus
Dere\GG13341-PA 306 GG13341-PA 5..304 15..318 674 41.8 Plus
Dere\GG13921-PA 381 GG13921-PA 11..314 15..316 579 36.2 Plus
Dere\GG13342-PA 375 GG13342-PA 30..360 11..311 309 26.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14844-PA 322 GH14844-PA 7..320 7..320 892 48.4 Plus
Dgri\GH15118-PA 307 GH15118-PA 4..298 17..316 703 43.9 Plus
Dgri\GH16650-PA 379 GH16650-PA 11..322 15..321 532 33.7 Plus
Dgri\GH15119-PA 374 GH15119-PA 33..361 17..313 323 26.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7551-PB 322 CG7551-PB 1..322 1..322 1726 100 Plus
CG7328-PA 306 CG7328-PA 5..304 15..318 660 42.1 Plus
CG12289-PA 378 CG12289-PA 11..314 15..316 572 36.2 Plus
CG7335-PA 372 CG7335-PA 30..357 14..311 290 26.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13699-PA 322 GI13699-PA 1..322 1..322 841 46.6 Plus
Dmoj\GI13769-PA 310 GI13769-PA 5..301 15..316 692 43.9 Plus
Dmoj\GI11611-PA 424 GI11611-PA 9..315 15..321 607 35.5 Plus
Dmoj\GI13697-PA 379 GI13697-PA 11..317 15..321 604 35.5 Plus
Dmoj\GI13771-PA 371 GI13771-PA 33..358 17..313 362 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22794-PA 302 GL22794-PA 1..302 25..322 958 54 Plus
Dper\GL25057-PA 310 GL25057-PA 8..309 15..318 714 43.8 Plus
Dper\GL22827-PA 192 GL22827-PA 11..189 15..191 348 36.9 Plus
Dper\GL25058-PA 371 GL25058-PA 30..356 14..311 334 26.6 Plus
Dper\GL22825-PA 219 GL22825-PA 11..137 15..141 290 40.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20433-PA 327 GA20433-PA 4..327 3..322 1046 55.2 Plus
Dpse\GA20264-PA 310 GA20264-PA 8..309 15..318 709 43.4 Plus
Dpse\GA23880-PA 394 GA23880-PA 11..318 15..320 649 39.3 Plus
Dpse\GA20271-PA 371 GA20271-PA 30..356 14..311 336 26.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25272-PA 322 GM25272-PA 1..322 1..322 1714 99.1 Plus
Dsec\GM22247-PA 306 GM22247-PA 5..304 15..318 677 41.8 Plus
Dsec\GM24754-PA 378 GM24754-PA 11..314 15..316 587 36.5 Plus
Dsec\GM22248-PA 372 GM22248-PA 30..357 14..311 306 27.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14306-PA 322 GD14306-PA 1..322 1..322 1699 98.1 Plus
Dsim\GD12218-PA 306 GD12218-PA 5..304 15..318 684 42.4 Plus
Dsim\GD12805-PA 378 GD12805-PA 11..314 15..316 590 36.8 Plus
Dsim\GD12219-PA 183 GD12219-PA 30..164 14..147 200 31.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14039-PA 322 GJ14039-PA 1..322 1..322 944 51.9 Plus
Dvir\GJ13759-PA 310 GJ13759-PA 5..301 15..316 709 43.6 Plus
Dvir\GJ11289-PA 420 GJ11289-PA 11..317 15..321 606 37.8 Plus
Dvir\GJ13760-PA 370 GJ13760-PA 33..355 17..311 381 29.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19276-PA 327 GK19276-PA 1..326 1..321 1025 53.7 Plus
Dwil\GK17169-PA 418 GK17169-PA 11..318 15..320 725 43.2 Plus
Dwil\GK17250-PA 308 GK17250-PA 5..305 15..316 689 44.2 Plus
Dwil\GK17251-PA 698 GK17251-PA 30..365 14..311 315 26.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21811-PA 322 GE21811-PA 1..322 1..322 1575 88.8 Plus
Dyak\GE22430-PA 306 GE22430-PA 5..302 15..316 685 42.1 Plus
Dyak\GE20217-PA 380 GE20217-PA 11..319 15..321 571 35.3 Plus
Dyak\GE22431-PA 375 GE22431-PA 33..360 14..311 306 25.9 Plus
Dyak\GE23230-PA 330 GE23230-PA 15..315 41..311 277 26.2 Plus

AT07524.hyp Sequence

Translation from 70 to 1038

> AT07524.hyp
MTQYGHKLSWAVGKKTVLCIGTTTIDFVSTIKRFPEENSHQKVIGGYWIR
GGKASNNCTVLANLGVKVEFLGMLSSWSVFQVLVDDLKSRGIIIDNCPTC
DQGAPFSSVILTKATKTRNIVYCNNNFPYVSIDDFRKLNLNQYGWIHIRA
LYFDKSLPMVKDIEAYNANRKEKIVLSMEFDNNLDDMWPLMDYCDYAVFS
KKLAQPNGWVSLEDACMQLDERLRMRWGLNLKRPYVVVLWGDQGAGILDL
NGNFTHVKPHKPKRIVDALGAGDTFVGAFIYALYIRERSVSVAVDFGNRM
ASYKCTKNGYDHIANILLPPIL*

AT07524.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG7551-PB 322 CG7551-PB 1..322 1..322 1726 100 Plus
CG7328-PA 306 CG7328-PA 5..304 15..318 660 42.1 Plus
CG12289-PA 378 CG12289-PA 11..314 15..316 572 36.2 Plus
CG7335-PA 372 CG7335-PA 30..357 14..311 290 26.8 Plus