Clone AT07585 Report

Search the DGRC for AT07585

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:75
Well:85
Vector:pOTB7
Associated Gene/TranscriptCG12493-RA
Protein status:AT07585.pep: gold
Preliminary Size:789
Sequenced Size:1170

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12493 2002-01-01 Sim4 clustering to Release 2
CG12493 2002-02-22 Blastp of sequenced clone
CG12493 2003-01-01 Sim4 clustering to Release 3
CG12493 2008-04-29 Release 5.5 accounting
CG12493 2008-08-15 Release 5.9 accounting
CG12493 2008-12-18 5.12 accounting

Clone Sequence Records

AT07585.complete Sequence

1170 bp (1170 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089272

> AT07585.complete
AGAAAGTCATTCTTGGCAGTACAAAAGTTTTGGAGAAGCAGATCTAATTG
TGTTTCAAATAATTTAATATCTAAGTGCAACCGACAACCAATTGGATCAG
GAAAGATGGCAATCGATGATATGAAGGACCTATTGATCGTAAATGTTTCT
GACCAAGAGGATGCAGGTATGTCAGATGACTTGAAGGAAACTGCAATGGA
TTGTAATATGCCCGATGGTGAATCTTCTCTCGTAATCACTGATGGCGATT
CTATGTCAAAGATCCCTGATGACGCTGCCATGGCAACCAGCGACCCTAAG
AAGAAAAAGAAGAAGGTAAAGAAATTGAAACGTTCCCAAAAAGCCAAGGA
TCGTCTTGTTCGCCCGTTGCCCAAGGCCGTGACCTCCAAGGATGCCCTTA
TGGTTTTGAAAGAGTTAAAGGGCGTGATAATCGACAACATGCAAATAAAA
CAAGACCACGAGGGGAAGAATGTGGCTAACATTGTTGTTAACTCAAAGAA
ATACGATGCGGAGGGTTCTTCAGAAAACTCTGCAGGGAATGCAGCTTGCG
AGAAGGCTCTGCGAGAAATCCTAACCACCAAAATGAAAGCTCTGTTGGCC
GAGCCAGAAAACAGCTCGGGAGGCGATGAAGATAATATACTCGAAAAGAT
GACCTCTTATGCCGTTTACAAACTTGCTGAGAAATGGAACAGCGACGCTA
TTGATGTTGCAGCCCTGTATAATGACGTAAAGAACAAGAAGACGTCGTCG
TCAGTTGGACAGTTGCCCAAATTATGGAAGAATATGCACCCTTGCATGGT
TCTGATGCAAATGCGCCCCCAGACCACCTTCAAATTTTTAGGTAGCTCTG
GTGAAAACCGTAAAGTTTTCTCAATGGGCGTCTCCGTGGACAACTGCGAG
TTTAAGGCTGATGGGCCAACCAAAAAAGATGCACGCCGCAAAGTAGCCGC
ATTAGTTTGTAACAAACTCTTTGGAACCGACTATCCACAAGCATAAGCGA
AAACATCACATGTATCTGGGCACCCCCTACTACCTTAAAACATATTCCCG
GCATTCACAAATAAACTATACGAAATACAATCTACATACATATTCAATCT
ACAACATACAATTCCATCTACAATACAATAATAAAATAATTTGACAACAT
TATAAAAAAAAAAAAAAAAA

AT07585.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-RA 1172 CG12493-RA 20..1172 1..1153 5765 100 Plus
CG10630-RA 1303 CG10630-RA 474..861 359..746 1265 88.4 Plus
Gef64C-RA 7374 Gef64C-RA 861..984 297..174 620 100 Minus
CG10630-RA 1303 CG10630-RA 991..1201 867..1078 495 83 Plus
CG10630-RA 1303 CG10630-RA 883..980 762..859 220 81.6 Plus
CG10630-RA 1303 CG10630-RA 49..97 1..49 170 89.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4751795..4752774 1153..174 4900 100 Minus
chr3L 24539361 chr3L 5490248..5490954 1056..359 1705 83.7 Minus
chr3L 24539361 chr3L 4752946..4753120 175..1 875 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:42:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4752387..4753372 1159..174 4930 100 Minus
3L 28110227 3L 5497646..5498352 1056..359 1705 83.7 Minus
3L 28110227 3L 4753544..4753718 175..1 875 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4752387..4753372 1159..174 4930 100 Minus
3L 28103327 3L 5491065..5491452 746..359 1265 88.4 Minus
3L 28103327 3L 4753544..4753718 175..1 875 100 Minus
3L 28103327 3L 5490725..5490935 1078..867 495 83 Minus
3L 28103327 3L 5490946..5491043 859..762 220 81.6 Minus
3L 28103327 3L 5491997..5492045 49..1 170 89.7 Minus
Blast to na_te.dros performed on 2019-03-16 05:59:56 has no hits.

AT07585.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4752946..4753120 1..175 100   Minus
chr3L 4751795..4752772 176..1153 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:55:09 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 106..996 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:43:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 106..996 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:23:10 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 106..996 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:37 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 106..996 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:34 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..891 106..996 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:40 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..1153 1..1153 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:43:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..1153 1..1153 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:10 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 21..1173 1..1153 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:37 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 1..1153 1..1153 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:34 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
CG12493-RA 21..1173 1..1153 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4752393..4753370 176..1153 100 <- Minus
3L 4753544..4753718 1..175 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4752393..4753370 176..1153 100 <- Minus
3L 4753544..4753718 1..175 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:01 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4752393..4753370 176..1153 100 <- Minus
3L 4753544..4753718 1..175 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:10 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4752393..4753370 176..1153 100 <- Minus
arm_3L 4753544..4753718 1..175 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:46:06 Download gff for AT07585.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4752393..4753370 176..1153 100 <- Minus
3L 4753544..4753718 1..175 100   Minus

AT07585.hyp Sequence

Translation from 1 to 995

> AT07585.hyp
RKSFLAVQKFWRSRSNCVSNNLISKCNRQPIGSGKMAIDDMKDLLIVNVS
DQEDAGMSDDLKETAMDCNMPDGESSLVITDGDSMSKIPDDAAMATSDPK
KKKKKVKKLKRSQKAKDRLVRPLPKAVTSKDALMVLKELKGVIIDNMQIK
QDHEGKNVANIVVNSKKYDAEGSSENSAGNAACEKALREILTTKMKALLA
EPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAIDVAALYNDVKNKKTSS
SVGQLPKLWKNMHPCMVLMQMRPQTTFKFLGSSGENRKVFSMGVSVDNCE
FKADGPTKKDARRKVAALVCNKLFGTDYPQA*

AT07585.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-PA 296 CG12493-PA 1..296 36..331 1509 100 Plus
CG12493-PB 293 CG12493-PB 1..293 36..331 1480 99 Plus
blanks-PA 324 CG10630-PA 13..323 35..330 799 56.2 Plus
DIP1-PI 378 CG17686-PI 49..372 46..328 362 32.1 Plus
DIP1-PG 378 CG17686-PG 49..372 46..328 362 32.1 Plus

AT07585.pep Sequence

Translation from 105 to 995

> AT07585.pep
MAIDDMKDLLIVNVSDQEDAGMSDDLKETAMDCNMPDGESSLVITDGDSM
SKIPDDAAMATSDPKKKKKKVKKLKRSQKAKDRLVRPLPKAVTSKDALMV
LKELKGVIIDNMQIKQDHEGKNVANIVVNSKKYDAEGSSENSAGNAACEK
ALREILTTKMKALLAEPENSSGGDEDNILEKMTSYAVYKLAEKWNSDAID
VAALYNDVKNKKTSSSVGQLPKLWKNMHPCMVLMQMRPQTTFKFLGSSGE
NRKVFSMGVSVDNCEFKADGPTKKDARRKVAALVCNKLFGTDYPQA*

AT07585.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10760-PA 296 GF10760-PA 62..294 66..293 202 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14132-PA 310 GG14132-PA 1..309 6..294 641 47.2 Plus
Dere\GG17525-PA 395 GG17525-PA 129..389 68..293 345 34.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17808-PA 279 GH17808-PA 16..275 68..293 317 32.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12493-PA 296 CG12493-PA 1..296 1..296 1509 100 Plus
CG12493-PB 293 CG12493-PB 1..293 1..296 1480 99 Plus
blanks-PA 324 CG10630-PA 18..323 5..295 795 56.4 Plus
DIP1-PI 378 CG17686-PI 49..372 11..293 362 32.1 Plus
DIP1-PG 378 CG17686-PG 49..372 11..293 362 32.1 Plus
DIP1-PE 378 CG17686-PE 49..372 11..293 362 32.1 Plus
DIP1-PF 394 CG17686-PF 65..388 11..293 362 32.1 Plus
DIP1-PC 395 CG17686-PC 66..389 11..293 362 32.1 Plus
DIP1-PB 409 CG17686-PB 80..403 11..293 362 32.1 Plus
DIP1-PD 410 CG17686-PD 81..404 11..293 362 32.1 Plus
DIP1-PH 309 CG17686-PH 7..303 39..293 357 32.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14602-PA 338 GI14602-PA 63..333 68..293 330 32.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13431-PA 392 GL13431-PA 124..387 68..293 333 33.7 Plus
Dper\GL27226-PA 244 GL27226-PA 4..240 95..293 258 33.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:18:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14612-PA 392 GA14612-PA 124..387 68..293 333 34.5 Plus
Dpse\GA26778-PA 311 GA26778-PA 26..307 69..293 260 29.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:18:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13952-PA 300 GM13952-PA 5..299 1..295 897 64.2 Plus
Dsec\GM13918-PA 332 GM13918-PA 1..331 6..295 728 53.3 Plus
Dsec\GM13527-PA 400 GM13527-PA 98..394 39..293 347 33 Plus
Dsec\GM19637-PA 364 GM19637-PA 66..358 39..293 344 32.8 Plus
Dsec\GM24510-PA 381 GM24510-PA 117..375 68..293 334 33.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13235-PA 304 GD13235-PA 9..303 1..295 917 64.5 Plus
Dsim\GD13198-PA 257 GD13198-PA 29..256 76..295 707 63.2 Plus
Dsim\GD24670-PA 400 GD24670-PA 98..394 39..293 348 32.7 Plus
Dsim\GD15489-PA 380 GD15489-PA 147..374 72..293 316 34 Plus
Dsim\GD24430-PA 110 GD24430-PA 29..104 219..293 179 46.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19010-PA 375 GJ19010-PA 68..370 12..293 337 31.1 Plus
Dvir\GJ10989-PA 199 GJ10989-PA 4..197 95..293 274 37.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25242-PA 412 GK25242-PA 116..407 68..293 308 30.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:18:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20559-PA 404 GE20559-PA 96..403 6..295 659 47.9 Plus
Dyak\GE15285-PA 392 GE15285-PA 97..386 39..293 354 32.8 Plus