BDGP Sequence Production Resources |
Search the DGRC for AT07738
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 77 |
Well: | 38 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rrp45-RA |
Protein status: | AT07738.pep: gold |
Preliminary Size: | 1401 |
Sequenced Size: | 1512 |
Gene | Date | Evidence |
---|---|---|
CG9606 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9606 | 2002-02-22 | Blastp of sequenced clone |
CG9606 | 2003-01-01 | Sim4 clustering to Release 3 |
Rrp45 | 2008-04-29 | Release 5.5 accounting |
Rrp45 | 2008-08-15 | Release 5.9 accounting |
Rrp45 | 2008-12-18 | 5.12 accounting |
1512 bp (1512 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089277
> AT07738.complete CCTCGTGCCGCAGCGAATACCCAGGATGTTCCATAACTCAAATTTTTTCG AGCCGGGCAAATCGAAGCCAGAGCGAAGCTTCGTCCAATTGGCGGTGAAG CAAAACCAACGCCTCGATGGGCGGCGCTCCAACGAGTCCCGCGATGTGGA GCTGACCTTCGGCAAGGATTGGGGCTCCGTGGCGGTGTCCATGGGCGATA CGAAGGTACTGGCCCAAGTGACCTGCGAAATGGGACCGCCGGCCTTGTCG CGGCCCAACGAAGGCAAAATCCACCTGAACGTATATCTTGGCGGTGTTGC TTTTCTGGACGAGGCGCATACCACACATGACCAGCGATCGCTAAAACTGA ACTCCCTGCTCGAGAGGACCTTCCGCAGCTCTAGAAGCATCGATCTGGAA TCTCTGTGCGTGGCCGTCGAGAAGCATGTGTGGTGCATCCGTGTCAACGT CAATGTGCTCAATCACGACGGGAATCTGTATGACGCCAGCACCATAGCCA CTTTGGCTGCATTGATGCACTTCCGTCGACCGGATGTCTGGTATAAGGAC GGCGAACTGCGCATCTTTAAGAAAAAGGAGCGCGAATTCATTCCACTGCT TTTCCACCACTATCCCGTCAGTGTAACCTACTGTGTTTACAAGAGCAGTG TGCAACCAATACTGGATCCTACGCTGCTGGAGGAGAACGCCGCCGATTCG GTAATTGTCCTGAGCTTTAACTCCTTCCAGGAGCTGTGCAGCCTGACTGC CGGAGGCACTGCACCCACAAATGCCCGTATCATCATGCAGTGTGCCCGCA ATGCGGCGGTTCGTTGCAAGTCTCTGTTGAATTTCGTACGCAAAGCTTTG GCGCTGGACGAAGAGTGTCGATCGCAGGGCGATCAATCGGTCGATGGGCT GGTGGCACTGATTTTAAATACGGAGCACAAGTTGAGCTACAACAAACTGA TGGGCAGACAGAAACAGGAGCAGCAACCTCCGCCAAGCGAGAAAATGCAG TTGGATAATAACGAGAGCAGTGAGACGCCTGTGGCCAACGAAGAGCCGTC CAAAGAGGAAAGTGCTGGCGCACCGATGGACACCAGCGACTGGCTGCCAC ACGATGAGGACTCCCAGGAACTGCCCATGCGCTCGGAAGCAAGCCCATCG AAGGCAGGCCTTAAAGGCAAACAAAGTCGCGGCAAATACAAGGCGAACAA AAAGACACCGCCGAGGAAGCAAAATCACAGCGACTCCGAGGAGGAAGCCA AGCGATACATCTAGCCGTTGTGATAGTCGTGTAGTTAAGAGAAAATGCTT TCTATTAAGTTTTATTTAGGCTTATATGTATGGCTAAAATCAGTCTAGGC TTTAACATAAATCGTTTAATGCGTAATTCCAATTGATTTGTGGAACCGAT GTTCGTCTAAGTTAGGCTTAAACTAGAGCTCTAAATATATCTCCAAACCG CCGGGGCAAACGACACGATGTTTTAGTTTAAATATTGCAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16679407..16680148 | 1223..482 | 3710 | 100 | Minus |
chrX | 22417052 | chrX | 16680308..16680779 | 482..11 | 2360 | 100 | Minus |
chrX | 22417052 | chrX | 16679087..16679351 | 1488..1224 | 1325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16789773..16790514 | 1223..482 | 3695 | 99.9 | Minus |
X | 23542271 | X | 16790674..16791145 | 482..11 | 2360 | 100 | Minus |
X | 23542271 | X | 16789450..16789717 | 1491..1224 | 1340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16797871..16798612 | 1223..482 | 3695 | 99.8 | Minus |
X | 23527363 | X | 16798772..16799243 | 482..11 | 2360 | 100 | Minus |
X | 23527363 | X | 16797548..16797815 | 1491..1224 | 1340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16679087..16679351 | 1224..1488 | 100 | <- | Minus |
chrX | 16679407..16680147 | 483..1223 | 100 | <- | Minus |
chrX | 16680308..16680785 | 1..482 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1239 | 26..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1239 | 26..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1239 | 26..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1239 | 26..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1239 | 26..1264 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1484 | 4..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1484 | 4..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 83..1566 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 1..1484 | 4..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp45-RA | 116..1599 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16789453..16789717 | 1224..1488 | 100 | <- | Minus |
X | 16789773..16790513 | 483..1223 | 99 | <- | Minus |
X | 16790674..16791151 | 1..482 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16789453..16789717 | 1224..1488 | 100 | <- | Minus |
X | 16789773..16790513 | 483..1223 | 99 | <- | Minus |
X | 16790674..16791151 | 1..482 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16789453..16789717 | 1224..1488 | 100 | <- | Minus |
X | 16789773..16790513 | 483..1223 | 99 | <- | Minus |
X | 16790674..16791151 | 1..482 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16683486..16683750 | 1224..1488 | 100 | <- | Minus |
arm_X | 16683806..16684546 | 483..1223 | 99 | <- | Minus |
arm_X | 16684707..16685184 | 1..482 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16797551..16797815 | 1224..1488 | 100 | <- | Minus |
X | 16797871..16798611 | 483..1223 | 99 | <- | Minus |
X | 16798772..16799249 | 1..482 | 99 | Minus |
Translation from 1 to 1263
> AT07738.hyp PSQRIPRMFHNSNFFEPGKSKPERSFVQLAVKQNQRLDGRRSNESRDVEL TFGKDWGSVAVSMGDTKVLAQVTCEMGPPALSRPNEGKIHLNVYLGGVAF LDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCVAVEKHVWCIRVNVN VLNHDGNLYDASTIATLAALMHFRRPDVWYKDGELRIFKKKEREFIPLLF HHYPVSVTYCVYKSSVQPILDPTLLEENAADSVIVLSFNSFQELCSLTAG GTAPTNARIIMQCARNAAVRCKSLLNFVRKALALDEECRSQGDQSVDGLV ALILNTEHKLSYNKLMGRQKQEQQPPPSEKMQLDNNESSETPVANEEPSK EESAGAPMDTSDWLPHDEDSQELPMRSEASPSKAGLKGKQSRGKYKANKK TPPRKQNHSDSEEEAKRYI*
Translation from 25 to 1263
> AT07738.pep MFHNSNFFEPGKSKPERSFVQLAVKQNQRLDGRRSNESRDVELTFGKDWG SVAVSMGDTKVLAQVTCEMGPPALSRPNEGKIHLNVYLGGVAFLDEAHTT HDQRSLKLNSLLERTFRSSRSIDLESLCVAVEKHVWCIRVNVNVLNHDGN LYDASTIATLAALMHFRRPDVWYKDGELRIFKKKEREFIPLLFHHYPVSV TYCVYKSSVQPILDPTLLEENAADSVIVLSFNSFQELCSLTAGGTAPTNA RIIMQCARNAAVRCKSLLNFVRKALALDEECRSQGDQSVDGLVALILNTE HKLSYNKLMGRQKQEQQPPPSEKMQLDNNESSETPVANEEPSKEESAGAP MDTSDWLPHDEDSQELPMRSEASPSKAGLKGKQSRGKYKANKKTPPRKQN HSDSEEEAKRYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22565-PA | 412 | GF22565-PA | 1..412 | 1..412 | 1315 | 61 | Plus |
Dana\GF11284-PA | 296 | GF11284-PA | 7..221 | 13..222 | 165 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18224-PA | 415 | GG18224-PA | 1..415 | 1..412 | 1682 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14641-PA | 415 | GH14641-PA | 1..415 | 1..412 | 1267 | 59.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rrp45-PB | 412 | CG9606-PB | 1..412 | 1..412 | 2146 | 100 | Plus |
Rrp45-PA | 412 | CG9606-PA | 1..412 | 1..412 | 2146 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11625-PA | 417 | GI11625-PA | 1..417 | 1..412 | 1265 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26867-PA | 398 | GL26867-PA | 1..385 | 1..376 | 1248 | 60.4 | Plus |
Dper\GL10119-PA | 296 | GL10119-PA | 7..219 | 13..220 | 150 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21908-PA | 398 | GA21908-PA | 1..371 | 1..360 | 1238 | 61.4 | Plus |
Dpse\GA21043-PA | 296 | GA21043-PA | 7..219 | 13..220 | 152 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13365-PA | 405 | GM13365-PA | 1..405 | 1..412 | 1885 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15722-PA | 407 | GD15722-PA | 1..407 | 1..412 | 1837 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11305-PA | 423 | GJ11305-PA | 1..423 | 1..412 | 1311 | 60.7 | Plus |
Dvir\GJ22278-PA | 296 | GJ22278-PA | 7..168 | 13..171 | 153 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14785-PA | 415 | GK14785-PA | 1..414 | 1..412 | 1268 | 59 | Plus |
Dwil\GK21414-PA | 296 | GK21414-PA | 7..249 | 13..245 | 160 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15642-PA | 415 | GE15642-PA | 1..415 | 1..412 | 1719 | 79.1 | Plus |