Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
AT07821.complete Sequence
1181 bp (1181 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089280
> AT07821.complete
GTAGGATTCAGATCTATTGGTAGAAAGTAAGAAAAAAAAAATTCTCAAAA
TTTAAGTTATATACAAATTTGGAGTGAAATATTTTATAAACACTTTCGGA
GTATCTCGAGCTTTCCACACATCGAAAATGAATTTTTGTTCAGTGCCTTA
CGAAGCTGACTACGGCATGTACGCCGATTCCAAGATGAAGAGCGTTCCTC
AGTACCCCCTGAGCATGGGAGTCGGTCAGGGTCAAGGACAGTCCATGGCC
ATGCAGCCCCTGAATCCACCGCAGATGAATCTGCAGATGCAGATGCCCGT
GTGCCAGTCGGGCGCTTCGTCGTACCCAATGCAGGGTATGCCGCTGGGCA
TGATGCAAGGGGGCAATCAGATGACCCCCATGTCCACGATGTCCACCCAG
CTGCCGATTGGAGCGGTGACTCCCCTGAGCAGCATGACCATGATGCCCAT
GATGGGCAATCCCATGGGCGCCATCGATGCCCCCGGGATCAATGCAGTGC
TGCCTGACCTGCAGCCGATGACCTCGATGGGTCAGATGCAGCCGCTGCAA
CAGTACAATCCCAGTGGATCTACCACCCAAATGCATCAAGGACGTCTGAC
GGGCGGCTGCAATGCTGTGATGTCTGCGCCCTGTCCCTCGTCGCCCTCGC
AAGCTGGCGGCTGGAGCTCCGGTCCCAGCCCCAACCAAATGATGAACAGC
TCCAATATGTGGCAATACAGTCAGCCTATGCAGAGTCACCAGCCGCAGTA
CCACCAGCAGCACCAGCAGCAGCAGCAACAGCAGCAGCAGCACTATCAGC
AGCCGAGCCAGGGACACCAACAGGTCAACCGGATGAAGACCTCCTACGAC
GCTCCCATGTACCGGGATATGCGGAACGGTCTAAACGCACCATCGATACA
CGATTCATCGAAGTACAGCAAAGGCAATCAATCATTCAATTGTGGAAAAG
CGGTTAGCAAGGTCCCCCATTGGCGTTGACGAAACCCTTGAGCCCATCAT
TAGTTGTTTTTGTACTTTTGCATGATTGGTGTCTCTTTATTTATGTGTTC
CAAGACTTCCCCTACGCAAGCAAACAGATACTCAAACCCACAAGAAACAC
AGACTTGGCCACAAACATATTGGTGTGGAATAAATAGTTTATATGTTTAT
GGCCGAAATGGAAAAAAAAAAAAAAAAAAAA
AT07821.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:27:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3124-RA | 1252 | CG3124-RA | 63..1225 | 1..1163 | 5770 | 99.7 | Plus |
CG3124.b | 1174 | CG3124.b | 19..962 | 1..944 | 4690 | 99.7 | Plus |
CG3124.a | 1302 | CG3124.a | 19..904 | 1..886 | 4400 | 99.7 | Plus |
CG3124.a | 1302 | CG3124.a | 931..1208 | 886..1163 | 1375 | 99.6 | Plus |
CG3124.b | 1174 | CG3124.b | 962..1174 | 950..1162 | 1050 | 99.5 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:06:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19169540..19170242 | 885..183 | 3485 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 19169130..19169347 | 1161..944 | 1075 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 19170301..19170482 | 182..1 | 910 | 100 | Minus |
chr2R | 21145070 | chr2R | 19169404..19169463 | 945..886 | 300 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:42:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23283153..23283855 | 885..183 | 3485 | 99.7 | Minus |
2R | 25286936 | 2R | 23282741..23282960 | 1163..944 | 1085 | 99.5 | Minus |
2R | 25286936 | 2R | 23283912..23284095 | 184..1 | 920 | 100 | Minus |
2R | 25286936 | 2R | 23283017..23283076 | 945..886 | 300 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23284352..23285054 | 885..183 | 3485 | 99.7 | Minus |
2R | 25260384 | 2R | 23283940..23284159 | 1163..944 | 1085 | 99.5 | Minus |
2R | 25260384 | 2R | 23285111..23285294 | 184..1 | 920 | 100 | Minus |
2R | 25260384 | 2R | 23284216..23284275 | 945..886 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 12:06:02 has no hits.
AT07821.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:06:47 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19169130..19169346 | 945..1161 | 99 | <- | Minus |
chr2R | 19169405..19169463 | 886..944 | 100 | <- | Minus |
chr2R | 19169540..19169621 | 804..885 | 100 | == | Minus |
chr2R | 19169686..19170240 | 185..739 | 99 | <- | Minus |
chr2R | 19170299..19170482 | 1..184 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:55:39 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 1..852 | 128..979 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:42:53 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 1..852 | 128..979 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:06:09 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 1..852 | 128..979 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:33 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 1..852 | 128..979 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:36:37 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 1..852 | 128..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:34 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 19..1179 | 1..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:42:53 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 19..1179 | 1..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:06:09 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 19..1179 | 1..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:33 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 9..1169 | 1..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:36:37 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3124-RA | 19..1179 | 1..1161 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:47 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23282743..23282959 | 945..1161 | 99 | <- | Minus |
2R | 23283018..23283076 | 886..944 | 100 | <- | Minus |
2R | 23283153..23283853 | 185..885 | 99 | <- | Minus |
2R | 23283912..23284095 | 1..184 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:47 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23282743..23282959 | 945..1161 | 99 | <- | Minus |
2R | 23283018..23283076 | 886..944 | 100 | <- | Minus |
2R | 23283153..23283853 | 185..885 | 99 | <- | Minus |
2R | 23283912..23284095 | 1..184 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:47 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23282743..23282959 | 945..1161 | 99 | <- | Minus |
2R | 23283018..23283076 | 886..944 | 100 | <- | Minus |
2R | 23283153..23283853 | 185..885 | 99 | <- | Minus |
2R | 23283912..23284095 | 1..184 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:06:09 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19171435..19171618 | 1..184 | 100 | | Minus |
arm_2R | 19170266..19170482 | 945..1161 | 99 | <- | Minus |
arm_2R | 19170541..19170599 | 886..944 | 100 | <- | Minus |
arm_2R | 19170676..19171376 | 185..885 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:46:01 Download gff for
AT07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23283960..23284176 | 945..1161 | 99 | <- | Minus |
2R | 23284235..23284293 | 886..944 | 100 | <- | Minus |
2R | 23284370..23285070 | 185..885 | 99 | <- | Minus |
2R | 23285129..23285312 | 1..184 | 100 | | Minus |
AT07821.pep Sequence
Translation from 127 to 978
> AT07821.pep
MNFCSVPYEADYGMYADSKMKSVPQYPLSMGVGQGQGQSMAMQPLNPPQM
NLQMQMPVCQSGASSYPMQGMPLGMMQGGNQMTPMSTMSTQLPIGAVTPL
SSMTMMPMMGNPMGAIDAPGINAVLPDLQPMTSMGQMQPLQQYNPSGSTT
QMHQGRLTGGCNAVMSAPCPSSPSQAGGWSSGPSPNQMMNSSNMWQYSQP
MQSHQPQYHQQHQQQQQQQQQHYQQPSQGHQQVNRMKTSYDAPMYRDMRN
GLNAPSIHDSSKYSKGNQSFNCGKAVSKVPHWR*
AT07821.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:18:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13304-PA | 315 | GF13304-PA | 1..315 | 1..283 | 622 | 52.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20052-PA | 277 | GG20052-PA | 1..277 | 1..283 | 1014 | 81.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3124-PA | 283 | CG3124-PA | 1..283 | 1..283 | 1539 | 100 | Plus |
CG3124-PB | 256 | CG3124-PB | 1..255 | 1..255 | 1377 | 99.6 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:18:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11284-PA | 309 | GL11284-PA | 1..309 | 1..283 | 344 | 43.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:18:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16114-PA | 303 | GA16114-PA | 1..303 | 1..283 | 348 | 42.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:18:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15566-PA | 279 | GM15566-PA | 1..279 | 1..283 | 1169 | 94.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:18:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25068-PA | 280 | GD25068-PA | 1..280 | 1..283 | 1158 | 94 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:18:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ20968-PA | 294 | GJ20968-PA | 3..294 | 1..283 | 215 | 35.1 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19584-PA | 260 | GK19584-PA | 1..260 | 1..274 | 365 | 45.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11588-PA | 275 | GE11588-PA | 1..275 | 1..283 | 1069 | 84.1 | Plus |
AT07821.hyp Sequence
Translation from 127 to 978
> AT07821.hyp
MNFCSVPYEADYGMYADSKMKSVPQYPLSMGVGQGQGQSMAMQPLNPPQM
NLQMQMPVCQSGASSYPMQGMPLGMMQGGNQMTPMSTMSTQLPIGAVTPL
SSMTMMPMMGNPMGAIDAPGINAVLPDLQPMTSMGQMQPLQQYNPSGSTT
QMHQGRLTGGCNAVMSAPCPSSPSQAGGWSSGPSPNQMMNSSNMWQYSQP
MQSHQPQYHQQHQQQQQQQQQHYQQPSQGHQQVNRMKTSYDAPMYRDMRN
GLNAPSIHDSSKYSKGNQSFNCGKAVSKVPHWR*
AT07821.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:55:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3124-PA | 283 | CG3124-PA | 1..283 | 1..283 | 1539 | 100 | Plus |
CG3124-PB | 256 | CG3124-PB | 1..255 | 1..255 | 1377 | 99.6 | Plus |