Clone AT07857 Report

Search the DGRC for AT07857

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:78
Well:57
Vector:pOTB7
Associated Gene/TranscriptCG14721-RA
Protein status:AT07857.pep: gold
Preliminary Size:1028
Sequenced Size:1271

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14721 2002-01-01 Sim4 clustering to Release 2
CG14721 2002-02-22 Blastp of sequenced clone
CG14721 2003-01-01 Sim4 clustering to Release 3
CG14721 2008-04-29 Release 5.5 accounting
CG14721 2008-08-15 Release 5.9 accounting
CG14721 2008-12-18 5.12 accounting

Clone Sequence Records

AT07857.complete Sequence

1271 bp (1271 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089282

> AT07857.complete
AGAGCTTCGTACTAGCGGACTGTCCGGGCGTATTCTTTCAATAATATATG
ATTTTGGTTAAATTATATGGGACGGGCGGCTGCACAATGACGGCGGCAGG
CGCTCCAGGGTCCGCCTTAAATTGGATGCGCCGCTCTCGCCACGGATTCG
GTTTGATCCGAATCACGCGAGTTGGCAGGCCGGCGCACCAACGCACCACC
CATTCCGCCACCCACCGCTTCCTTTGCACAAAAACAACAATCGGATTTCG
GCAGCAAATGGACCACACAATACCGCCCAAAGAGTACAAATGGACGCCGG
GCAACCTGATCAACGAGAACTTTAAGCTGGGCGACCATGGACACGTTTGC
GTGGTGCTCAATCGGCAGATTCAAGTGCCGGCGCACGTGGTGAAACTGCT
ATGGAAAAACGCCGCCGTTCGGTGTGCTGTCGATGGAGGCTCCAACCACT
GGCGTGACTTTGTCGTGGCTCAGGCAATGTCAAAGAAGGCCAATGGCTCC
GCGCCCACGACACCACTTGAACCGCTCGATGTGATAACGGGTGACTTCGA
CTCGATCACTGAGGAAACGGTCGATTTCTTCAAGACCACGCCGAAAGTCC
ACACACCCGACCAGGATGCAACAGATTTCACGAAGGCCATGGCCGTACTG
CAACCCGTAATGACGCAGCGTAAAATCCAGGATGTGGTGGTGTTTCATGA
CACTTCCGGTCGCTTGGACCAGGTCATGGCCAACCTAAACACGCTGTACA
AATCGCAAAAGGATAACTGCAATGTCTTCCTGTTGAGCGGGGATTCGGTG
ACGTGGTTATTGCGGCCGGGAAAGCACACGATACAGGTGCCCGTCGACCT
GGTCACCAGCCAGCGATGGTGCTCTCTGATGCCCGTGGGATCGTCGGCCC
ACAATGTCACTACCACGGGACTCAAATGGAACCTATATCATGCACAGCTG
GAGTTTGGTGGTATGGTAAGCACCTCAAACACCTATGCGACCGAGTTCGT
CCAGGTGGAGACGGACGCCAACCTGATCTGGTCTATGGGTGCCTACGAAT
TTGAGGATAAGGTGCGACAAGCCGCCAAGACATAGATGATAATGGATGGT
TCTGAGTACTAATGAAAGGCTTAGATTACACCAGTGTACAGTGTTGACCA
CAGCTGCATCTGATTGTTTTTGTTTTTTTGCGGGGGTTGCATCTATAGTG
CTATTATTGTTTAACGAAATGAAAGTTTATGTAAAAATTTTTAGTGATAA
AAAAAAAAAAAAAAAAAAAAA

AT07857.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1352 CG14721-RA 1..1250 1..1250 6235 99.9 Plus
mus309-RA 6407 mus309-RA 5200..5725 936..411 2615 99.8 Minus
mus309-RA 6407 mus309-RA 5786..6196 411..1 2055 100 Minus
mus309-RA 6407 mus309-RA 4827..5144 1250..933 1575 99.6 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7561437..7561962 411..936 2615 99.8 Plus
chr3R 27901430 chr3R 7560966..7561376 1..411 2055 100 Plus
chr3R 27901430 chr3R 7562018..7562333 933..1248 1565 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:42:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735918..11736443 411..936 2615 99.8 Plus
3R 32079331 3R 11735447..11735857 1..411 2055 100 Plus
3R 32079331 3R 11736499..11736816 933..1250 1575 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11476749..11477274 411..936 2615 99.8 Plus
3R 31820162 3R 11476278..11476688 1..411 2055 100 Plus
3R 31820162 3R 11477330..11477647 933..1250 1575 99.6 Plus
Blast to na_te.dros performed on 2019-03-16 00:26:41 has no hits.

AT07857.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:27:41 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7560966..7561376 1..411 100 -> Plus
chr3R 7561438..7561962 412..936 99 -> Plus
chr3R 7562022..7562333 937..1248 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:55:43 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 48..1085 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:42:39 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 48..1085 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:56:23 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 48..1085 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:24 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 48..1085 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:01:00 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1038 48..1085 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:21 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1248 1..1248 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:42:38 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1248 1..1248 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:56:23 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1248 1..1248 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:24 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1248 1..1248 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:01:00 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 1..1248 1..1248 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:27:41 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11735447..11735857 1..411 100 -> Plus
3R 11735919..11736443 412..936 99 -> Plus
3R 11736503..11736814 937..1248 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:27:41 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11735447..11735857 1..411 100 -> Plus
3R 11735919..11736443 412..936 99 -> Plus
3R 11736503..11736814 937..1248 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:27:41 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11735447..11735857 1..411 100 -> Plus
3R 11735919..11736443 412..936 99 -> Plus
3R 11736503..11736814 937..1248 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:56:23 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561169..7561579 1..411 100 -> Plus
arm_3R 7561641..7562165 412..936 99 -> Plus
arm_3R 7562225..7562536 937..1248 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:45:50 Download gff for AT07857.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11476278..11476688 1..411 100 -> Plus
3R 11476750..11477274 412..936 99 -> Plus
3R 11477334..11477645 937..1248 100   Plus

AT07857.hyp Sequence

Translation from 47 to 1084

> AT07857.hyp
MILVKLYGTGGCTMTAAGAPGSALNWMRRSRHGFGLIRITRVGRPAHQRT
THSATHRFLCTKTTIGFRQQMDHTIPPKEYKWTPGNLINENFKLGDHGHV
CVVLNRQIQVPAHVVKLLWKNAAVRCAVDGGSNHWRDFVVAQAMSKKANG
SAPTTPLEPLDVITGDFDSITEETVDFFKTTPKVHTPDQDATDFTKAMAV
LQPVMTQRKIQDVVVFHDTSGRLDQVMANLNTLYKSQKDNCNVFLLSGDS
VTWLLRPGKHTIQVPVDLVTSQRWCSLMPVGSSAHNVTTTGLKWNLYHAQ
LEFGGMVSTSNTYATEFVQVETDANLIWSMGAYEFEDKVRQAAKT*

AT07857.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 345 CG14721-PA 1..345 1..345 1841 100 Plus
CG14721-PB 275 CG14721-PB 1..275 71..345 1466 100 Plus

AT07857.pep Sequence

Translation from 47 to 1084

> AT07857.pep
MILVKLYGTGGCTMTAAGAPGSALNWMRRSRHGFGLIRITRVGRPAHQRT
THSATHRFLCTKTTIGFRQQMDHTIPPKEYKWTPGNLINENFKLGDHGHV
CVVLNRQIQVPAHVVKLLWKNAAVRCAVDGGSNHWRDFVVAQAMSKKANG
SAPTTPLEPLDVITGDFDSITEETVDFFKTTPKVHTPDQDATDFTKAMAV
LQPVMTQRKIQDVVVFHDTSGRLDQVMANLNTLYKSQKDNCNVFLLSGDS
VTWLLRPGKHTIQVPVDLVTSQRWCSLMPVGSSAHNVTTTGLKWNLYHAQ
LEFGGMVSTSNTYATEFVQVETDANLIWSMGAYEFEDKVRQAAKT*

AT07857.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18398-PA 274 GF18398-PA 1..273 71..344 1312 86.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18432-PA 332 GG18432-PA 1..332 14..345 1705 94.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23105-PA 276 GH23105-PA 1..272 71..340 1213 79 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-PA 345 CG14721-PA 1..345 1..345 1841 100 Plus
CG14721-PB 275 CG14721-PB 1..275 71..345 1466 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10297-PA 275 GI10297-PA 1..275 71..344 1219 78.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12387-PA 328 GL12387-PA 1..328 14..344 1392 76.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13203-PB 308 GA13203-PB 10..308 39..344 1365 80.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23976-PA 560 GM23976-PA 337..560 122..345 1188 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18782-PA 332 GD18782-PA 1..332 14..345 1783 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11104-PA 277 GJ11104-PA 1..277 71..344 1233 80.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15127-PA 344 GK15127-PA 34..344 38..340 1304 77.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24200-PA 332 GE24200-PA 1..332 14..345 1714 95.2 Plus