BDGP Sequence Production Resources |
Search the DGRC for AT07973
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 79 |
Well: | 73 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rpn8-RA |
Protein status: | AT07973.pep: gold |
Preliminary Size: | 1432 |
Sequenced Size: | 1511 |
Gene | Date | Evidence |
---|---|---|
CG3416 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3416 | 2002-02-22 | Blastp of sequenced clone |
CG3416 | 2003-01-01 | Sim4 clustering to Release 3 |
Mov34 | 2008-04-29 | Release 5.5 accounting |
Mov34 | 2008-08-15 | Release 5.9 accounting |
Mov34 | 2008-12-18 | 5.12 accounting |
1511 bp (1511 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089283
> AT07973.complete GCCTTGAAATAAATTCAGAAAGCGAGGCGTCGGCCACACTGTAAATCGTT TCTGCTTGTCATTTTGGCCTGAGTTTTTTGCCGCAAATTGCAGGTAATTT AGCGAAAAACAGGAGTCGCAGGAAGCCAAACCCGTCGAAAACAAATCAGT CCGGTACCTATCAATCGGCGCAGAGGTCATAGTAAGCCCCCGAACCGAAA ACCCAGAAAAAGCACAAACATGCCGTCGCAGGAGGTGAGCGTAAACAAAG TGATAGTGCATCCATTGGTTCTGCTGTCCGTGGTGGATCACTTCAACCGG ATGGGAAAGATTGGCAACCAGAAGCGCGTAGTGGGAGTCCTTCTGGGCTG CTGGCGATCCAAGGGAGTGCTCGATGTGTCCAACAGCTTCGCAGTGCCCT TCGACGAGGATGACAAGGACAAGTCGGTGTGGTTCCTGGACCACGACTAC CTGGAGAATATGTACGGCATGTTCAAAAAGGTGAACGCCAGGGAACGGGT TGTGGGATGGTATCACACAGGTCCCAAGCTCCACCAAAACGACATAGCCA TTAACGAGCTGGTCCGGCGCTATTGTCCCAACTCCGTGCTGGTCATCATC GACGCCAAGCCCAAGGATTTGGGCCTGCCCACAGAGGCGTACATATCGGT GGAGGAAGTCCATGACGACGGCTCTCCGACCAGCAAAACCTTCGAGCATG TGCCCAGCGAGATTGGCGCCGAGGAGGCGGAGGAGGTGGGCGTGGAGCAT CTGCTGCGTGACATCAAGGACACAACCGTGGGCAGCCTGTCGCAAAAGAT CACCAACCAGCTCATGGGTCTGAAAGGCCTGAATGCCCAGCTGCGGGACA TAAAGCAGTATCTGCAGCGCGTCGGCGACAGCAAGATGCCAATCAACCAC CAGATTGTCTACCAGCTGCAGGACATCTTCAACCTGCTGCCCGATATAAC CAATGACCAGTTCACGGGCACAATGTATGTGAAGACCAACGACCAAATGC TGGTCGTCTACCTGGCCTCCATGGTGCGCTCGATCATTGCCCTGCACAAC CTGATCAACAACAAGCTGGCCAACCGCGACGCCGAGGAGGGCAAGAGCGA CAGCAAGGAGGCCAAGGAGAAGAATAAGGATAGCAAGGATAAGGACAACA AGGAGACCAAGGACAAGGACGGCAAGAAGGCGGAGGAGAAGGCCGACAAG GGCAAGGACGAAGGCGGCAAGGGTTCGCGCAAATAGGAGCGGAAGAAAAA GCGCAAGCCCCGTCGCAAGCGAAAGAAGCAGCGGCCGCAGGACTAGCTGC TGCTTCTTCTGTTCTCCAGGAAGTGGAACTCATCTGCAGACCATACGGCG AGGGTGTGCAGTGGCCTCAGAAATCAAGCATTGCTACCATTCATCGTTCA TTTTCCACACGAAATTAAGCTCCCTCTTATTATTTCGCGTAACTAACTAA TGGCAAGTTTATGTAATTAAAAATTAAATAATTTAAATAACAAAAAAAAA AAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20288895..20289288 | 1..394 | 100 | -> | Plus |
chr2R | 20289356..20290066 | 395..1105 | 99 | == | Plus |
chr2R | 20290176..20290424 | 1215..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1017 | 220..1236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1017 | 220..1236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn8-RB | 1..1077 | 220..1296 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1017 | 220..1236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn8-RB | 1..1077 | 220..1296 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1490 | 1..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1490 | 1..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn8-RA | 1..1456 | 35..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mov34-RA | 1..1490 | 1..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn8-RA | 1..1456 | 35..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24402971..24403364 | 1..394 | 100 | -> | Plus |
2R | 24403432..24404527 | 395..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24402971..24403364 | 1..394 | 100 | -> | Plus |
2R | 24403432..24404527 | 395..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24402971..24403364 | 1..394 | 100 | -> | Plus |
2R | 24403432..24404527 | 395..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20290494..20290887 | 1..394 | 100 | -> | Plus |
arm_2R | 20290955..20292050 | 395..1491 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24404188..24404581 | 1..394 | 100 | -> | Plus |
2R | 24404649..24405744 | 395..1491 | 99 | Plus |
Translation from 219 to 1235
> AT07973.pep MPSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGV LDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHT GPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDD GSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMG LKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTG TMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKEAKE KNKDSKDKDNKETKDKDGKKAEEKADKGKDEGGKGSRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13608-PA | 354 | GF13608-PA | 1..334 | 1..334 | 1727 | 96.7 | Plus |
Dana\GF16095-PA | 280 | GF16095-PA | 8..270 | 11..275 | 248 | 29.4 | Plus |
Dana\GF18860-PA | 344 | GF18860-PA | 49..332 | 2..286 | 215 | 24.2 | Plus |
Dana\GF11048-PA | 285 | GF11048-PA | 10..271 | 10..271 | 189 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22963-PA | 338 | GG22963-PA | 1..338 | 1..338 | 1786 | 99.4 | Plus |
Dere\GG11433-PA | 280 | GG11433-PA | 8..270 | 11..275 | 252 | 29.3 | Plus |
Dere\GG11147-PA | 340 | GG11147-PA | 53..328 | 11..286 | 211 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20991-PA | 345 | GH20991-PA | 1..345 | 1..338 | 1499 | 88.7 | Plus |
Dgri\GH18119-PA | 280 | GH18119-PA | 8..270 | 11..275 | 262 | 29.7 | Plus |
Dgri\GH22436-PA | 344 | GH22436-PA | 57..332 | 11..286 | 227 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn8-PC | 338 | CG3416-PC | 1..338 | 1..338 | 1753 | 100 | Plus |
Rpn8-PB | 358 | CG3416-PB | 1..338 | 1..338 | 1753 | 100 | Plus |
Rpn8-PA | 338 | CG3416-PA | 1..338 | 1..338 | 1753 | 100 | Plus |
eIF3f1-PA | 280 | CG9769-PA | 8..271 | 11..276 | 259 | 28.7 | Plus |
CSN6-PA | 341 | CG6932-PA | 54..321 | 11..280 | 223 | 23 | Plus |
eIF3f2-PA | 286 | CG8335-PA | 11..272 | 10..271 | 188 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21325-PA | 340 | GI21325-PA | 1..340 | 1..338 | 1560 | 93.8 | Plus |
Dmoj\GI23834-PA | 280 | GI23834-PA | 8..270 | 11..275 | 271 | 30.4 | Plus |
Dmoj\GI22243-PA | 340 | GI22243-PA | 55..328 | 13..286 | 237 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20068-PA | 343 | GL20068-PA | 1..298 | 1..298 | 1489 | 97.3 | Plus |
Dper\GL21488-PA | 280 | GL21488-PA | 8..270 | 11..275 | 246 | 28.2 | Plus |
Dper\GL13811-PA | 347 | GL13811-PA | 60..335 | 11..286 | 216 | 24.1 | Plus |
Dper\GL16249-PA | 288 | GL16249-PA | 10..284 | 9..281 | 169 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17437-PA | 343 | GA17437-PA | 1..298 | 1..298 | 1489 | 97.3 | Plus |
Dpse\GA22021-PA | 280 | GA22021-PA | 8..270 | 11..275 | 246 | 28.2 | Plus |
Dpse\GA19964-PA | 347 | GA19964-PA | 60..335 | 11..286 | 216 | 24.1 | Plus |
Dpse\GA25107-PA | 288 | GA25107-PA | 10..284 | 9..281 | 183 | 21.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11856-PA | 338 | GM11856-PA | 1..338 | 1..338 | 1791 | 100 | Plus |
Dsec\GM10688-PA | 280 | GM10688-PA | 8..270 | 11..275 | 252 | 29.3 | Plus |
Dsec\GM26445-PA | 341 | GM26445-PA | 54..329 | 11..286 | 211 | 24.1 | Plus |
Dsec\GM16538-PA | 285 | GM16538-PA | 2..271 | 3..271 | 181 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11854-PA | 338 | GD11854-PA | 1..338 | 1..338 | 1791 | 100 | Plus |
Dsim\GD19663-PA | 280 | GD19663-PA | 8..270 | 11..275 | 252 | 29.3 | Plus |
Dsim\CSN6-PA | 341 | GD20964-PA | 54..329 | 11..286 | 211 | 24.1 | Plus |
Dsim\GD10400-PA | 285 | GD10400-PA | 10..271 | 10..271 | 179 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21597-PA | 343 | GJ21597-PA | 1..343 | 1..338 | 1499 | 88.9 | Plus |
Dvir\GJ23292-PA | 280 | GJ23292-PA | 8..270 | 11..275 | 266 | 29.7 | Plus |
Dvir\GJ23049-PA | 340 | GJ23049-PA | 55..328 | 13..286 | 235 | 24.5 | Plus |
Dvir\GJ17826-PA | 290 | GJ17826-PA | 10..280 | 9..275 | 151 | 20.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22207-PA | 342 | GK22207-PA | 1..342 | 1..338 | 1545 | 92.7 | Plus |
Dwil\GK14430-PA | 280 | GK14430-PA | 8..270 | 11..275 | 261 | 29.3 | Plus |
Dwil\GK11302-PA | 338 | GK11302-PA | 51..326 | 11..286 | 212 | 23.6 | Plus |
Dwil\GK21334-PA | 286 | GK21334-PA | 9..286 | 9..278 | 181 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14400-PA | 338 | GE14400-PA | 1..338 | 1..338 | 1785 | 99.4 | Plus |
Dyak\GE25339-PA | 280 | GE25339-PA | 8..270 | 11..275 | 252 | 29.3 | Plus |
Dyak\GE10312-PA | 340 | GE10312-PA | 53..328 | 11..286 | 212 | 24.1 | Plus |
Dyak\GE20747-PA | 279 | GE20747-PA | 4..265 | 10..271 | 175 | 25.7 | Plus |
Translation from 219 to 1235
> AT07973.hyp MPSQEVSVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGV LDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHT GPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDD GSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMG LKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTG TMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKEAKE KNKDSKDKDNKETKDKDGKKAEEKADKGKDEGGKGSRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn8-PC | 338 | CG3416-PC | 1..338 | 1..338 | 1753 | 100 | Plus |
Rpn8-PA | 338 | CG3416-PA | 1..338 | 1..338 | 1753 | 100 | Plus |
Rpn8-PB | 358 | CG3416-PB | 1..338 | 1..338 | 1753 | 100 | Plus |
CG9769-PA | 280 | CG9769-PA | 8..271 | 11..276 | 259 | 28.7 | Plus |
CSN6-PA | 341 | CG6932-PA | 54..321 | 11..280 | 223 | 23 | Plus |