BDGP Sequence Production Resources |
Search the DGRC for AT08049
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 80 |
Well: | 49 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG1440-RC |
Protein status: | AT08049.pep: gold |
Sequenced Size: | 2010 |
Gene | Date | Evidence |
---|---|---|
CG1440 | 2009-08-14 | Manual selection by Sue Celniker |
2010 bp assembled on 2009-12-11
GenBank Submission: BT120019.1
> AT08049.complete GACGAATAGCGTAAGTCAGTTTCTGCTGACAAAATTGCTTTGTTATTTGT TGTTTAATGTTTCGCTTTGAAATTGGCCAAAATCGCCGTCGTTTTTATTT CTTTTACCTGGACGATCAACACAAAATTATCGCTTTCGGTTTCTTTTCTG GGTAATCCGATCCTCCAGTTTGGGCGGTAAGGCGGTCAGTGACGCAGATC AAGATCAATTCCCCGAAACTGAGTCAAAATCCAAATACGTATCGCAATCG AATCCCGTATCCGCAGCAGCAGCAGGAGCCGGCGATGTACTATTCAAAAG AATCCGTTCAAACTCACACAATATCCGGCGAACGTTGCCAATCCCATTTA CTTGCAGCTGACAACAACAGCGGATCCGGAGGAGGTGGAAGCGGTGGCGG TGGCGCCGGTAACAATAACAGTGCCAATAGTGGTAAGAACTCGACGCACA GGTTCGCTGAGACCAGTGTGATCACCAATCAATTGTTGGAAAAATGGCGG AAAAACTTCTACAGCGAACCGAAGAATCTGCTGGCGCAGAACGTCTGCTC ACGCGTTGATCCGTTCGATGTGTGCCTGTCCAGGAAGGCACTGGAGACCA CCAATCATGTGTTCAACTACAAGGTGGAAACGGAGGGCAAGCCGGTGACC AATCAAAGGAGCTCCGGCCGCTGCTGGCTGTTTGCGGCCCTCAACTGCAT CCGCCTGCCATTCATGAAGAACTACAATCTGGACGAGTTCGAATTCTCGC AGGCCTTCCTCTTCTACTGGGACAAGATCGAGCGTTGCAACTACTTTCTC AACAATGTTGTGAAGACGGCACAGCGCGGCGAGAAGGTTGATGGTCGTCT GGTGTCGTTCCTGCTACTCGATCCCACCTCCGATGGCGGCCAGTGGGACA TGCTGGTCAATCTGATAACCAAACACGGCCTTATGCCAAAGAAATGCTTT CCCGAGAGCTTCAGCTGCGAGTCCAGCTTACGAATGAACGCCATACTGAA GAGCAAGCTACGGGAGTATGCCCGCAATTTGCGCGTGCTGATGGAGAAGA ATCCCACGGATGAGGAGATCGCCTGCAAGATCCAGGAGCAAATGGCCGAG ATCTACAAGGTGGTTGGCATTTGCCTGGGCATACCCTCGGAGACCTTCAC CTGGGAGTACTATGACAAGAGCAAGAACTATCAGTCAATCGGACCCGTTA GTTCGCTGGAGTTCTATGAGCGTTATGTTAAGCCGCATTTCAACGTGGAG GACAAAGTGTGCCTGGTCACCGATCCTCGGCCGACGAGTAGCTATGACCA GGCATACACTGTTGACTGCCTGGGCAACGTGGTTGGCGGTCGACCCGTTC TGTATAACAATCAGTCCGTCGAACTGCTCCTTGCGGTTGTCACCAAGTCG CTAAAGGCCGGCGAGGCCGTTTGGTTTGGCTGCGAGGTTAGCAAGCGATT CGCCTCCAAGCAGGGCATCGAGGATGTGGATGTCCACGATTTTAAGCTGG TCTTCGACATTGACATACAAACGACATTCTCCAAGGCAGACCGCCTGATC TACGGTGAATCGGCCATGACCCATGCCATGGTTTTCACCGCCGTATCCGT GGATAAGAGCGGCGTGGCCCAGAAATTGCGTGTGGAGAACTCGTGGGGTG AGGATCGCGGCGAGAAGGGCTATCTGGTGATGAACGCCGATTGGTTTAGG GAGTTTGGATTCGAGGTGGTCGTCGACAAGAAGTACGTGCCCGAGGATGT GTTGCGCGTGTTCGACATGGATCCGATCGTACTGCCTGCCTGGGATCCCA TGGGTACGCTAGCACAGTAGGTCCAGGTTGCCATCAAGACACACCCAACA CACCTAACACACACCCAACACACACACACACACCCAACACACACACACAC ACCCAACACACACCCAACACACACACACACATATAAAAAAACATATATTA AAATACAATATATATAAAGCTTTACGAGCAGCAAAAAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1440.b | 2320 | CG1440.b | 45..2028 | 1..1984 | 9920 | 100 | Plus |
CG1440-RC | 2382 | CG1440-RC | 45..2028 | 1..1984 | 9920 | 100 | Plus |
CG1440-RB | 1969 | CG1440-RB | 331..1957 | 358..1984 | 8135 | 100 | Plus |
CG1440-RB | 1969 | CG1440-RB | 45..330 | 1..286 | 1430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8330494..8331500 | 1..1007 | 4975 | 99.6 | Plus |
chrX | 22417052 | chrX | 8331559..8332036 | 1006..1483 | 2345 | 99.4 | Plus |
chrX | 22417052 | chrX | 8332287..8332668 | 1605..1982 | 1715 | 97.7 | Plus |
chrX | 22417052 | chrX | 8332103..8332223 | 1484..1604 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8438752..8439758 | 1..1007 | 5035 | 100 | Plus |
X | 23542271 | X | 8439817..8440294 | 1006..1483 | 2390 | 100 | Plus |
X | 23542271 | X | 8440545..8440924 | 1605..1984 | 1900 | 100 | Plus |
X | 23542271 | X | 8440361..8440481 | 1484..1604 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8446850..8447856 | 1..1007 | 5035 | 100 | Plus |
X | 23527363 | X | 8447915..8448392 | 1006..1483 | 2390 | 100 | Plus |
X | 23527363 | X | 8448643..8449022 | 1605..1984 | 1900 | 100 | Plus |
X | 23527363 | X | 8448459..8448579 | 1484..1604 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8330494..8331500 | 1..1007 | 99 | -> | Plus |
chrX | 8331561..8332036 | 1008..1483 | 99 | -> | Plus |
chrX | 8332103..8332223 | 1484..1604 | 100 | -> | Plus |
chrX | 8332287..8332520 | 1605..1838 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 1..1536 | 285..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 1..1536 | 285..1820 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RD | 1..1656 | 167..1820 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RD | 1..1656 | 167..1820 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 45..2026 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 45..2026 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 45..2026 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RC | 45..2026 | 1..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1484..1604 | 100 | -> | Plus |
X | 8439819..8440294 | 1008..1483 | 100 | -> | Plus |
X | 8438752..8439758 | 1..1007 | 100 | -> | Plus |
X | 8440545..8440922 | 1605..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1484..1604 | 100 | -> | Plus |
X | 8439819..8440294 | 1008..1483 | 100 | -> | Plus |
X | 8438752..8439758 | 1..1007 | 100 | -> | Plus |
X | 8440545..8440922 | 1605..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1484..1604 | 100 | -> | Plus |
X | 8439819..8440294 | 1008..1483 | 100 | -> | Plus |
X | 8438752..8439758 | 1..1007 | 100 | -> | Plus |
X | 8440545..8440922 | 1605..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8332785..8333791 | 1..1007 | 100 | -> | Plus |
arm_X | 8333852..8334327 | 1008..1483 | 100 | -> | Plus |
arm_X | 8334394..8334514 | 1484..1604 | 100 | -> | Plus |
arm_X | 8334578..8334955 | 1605..1982 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8446850..8447856 | 1..1007 | 100 | -> | Plus |
X | 8447917..8448392 | 1008..1483 | 100 | -> | Plus |
X | 8448459..8448579 | 1484..1604 | 100 | -> | Plus |
X | 8448643..8449020 | 1605..1982 | 100 | Plus |
Translation from 284 to 1819
> AT08049.hyp MYYSKESVQTHTISGERCQSHLLAADNNSGSGGGGSGGGGAGNNNSANSG KNSTHRFAETSVITNQLLEKWRKNFYSEPKNLLAQNVCSRVDPFDVCLSR KALETTNHVFNYKVETEGKPVTNQRSSGRCWLFAALNCIRLPFMKNYNLD EFEFSQAFLFYWDKIERCNYFLNNVVKTAQRGEKVDGRLVSFLLLDPTSD GGQWDMLVNLITKHGLMPKKCFPESFSCESSLRMNAILKSKLREYARNLR VLMEKNPTDEEIACKIQEQMAEIYKVVGICLGIPSETFTWEYYDKSKNYQ SIGPVSSLEFYERYVKPHFNVEDKVCLVTDPRPTSSYDQAYTVDCLGNVV GGRPVLYNNQSVELLLAVVTKSLKAGEAVWFGCEVSKRFASKQGIEDVDV HDFKLVFDIDIQTTFSKADRLIYGESAMTHAMVFTAVSVDKSGVAQKLRV ENSWGEDRGEKGYLVMNADWFREFGFEVVVDKKYVPEDVLRVFDMDPIVL PAWDPMGTLAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1440-PD | 551 | CG1440-PD | 41..551 | 1..511 | 2710 | 100 | Plus |
CG1440-PC | 511 | CG1440-PC | 1..511 | 1..511 | 2710 | 100 | Plus |
CG1440-PA | 488 | CG1440-PA | 2..488 | 25..511 | 2581 | 99.8 | Plus |
CG1440-PB | 368 | CG1440-PB | 1..368 | 144..511 | 1944 | 100 | Plus |
CG13423-PA | 476 | CG13423-PA | 4..474 | 62..509 | 725 | 35.4 | Plus |
Translation from 284 to 1819
> AT08049.pep MYYSKESVQTHTISGERCQSHLLAADNNSGSGGGGSGGGGAGNNNSANSG KNSTHRFAETSVITNQLLEKWRKNFYSEPKNLLAQNVCSRVDPFDVCLSR KALETTNHVFNYKVETEGKPVTNQRSSGRCWLFAALNCIRLPFMKNYNLD EFEFSQAFLFYWDKIERCNYFLNNVVKTAQRGEKVDGRLVSFLLLDPTSD GGQWDMLVNLITKHGLMPKKCFPESFSCESSLRMNAILKSKLREYARNLR VLMEKNPTDEEIACKIQEQMAEIYKVVGICLGIPSETFTWEYYDKSKNYQ SIGPVSSLEFYERYVKPHFNVEDKVCLVTDPRPTSSYDQAYTVDCLGNVV GGRPVLYNNQSVELLLAVVTKSLKAGEAVWFGCEVSKRFASKQGIEDVDV HDFKLVFDIDIQTTFSKADRLIYGESAMTHAMVFTAVSVDKSGVAQKLRV ENSWGEDRGEKGYLVMNADWFREFGFEVVVDKKYVPEDVLRVFDMDPIVL PAWDPMGTLAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22364-PA | 510 | GF22364-PA | 40..510 | 43..511 | 2405 | 94.3 | Plus |
Dana\GF12272-PA | 521 | GF12272-PA | 17..474 | 63..486 | 756 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18250-PA | 486 | GG18250-PA | 2..486 | 25..511 | 2544 | 96.7 | Plus |
Dere\GG22041-PA | 475 | GG22041-PA | 5..473 | 63..509 | 740 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12231-PA | 492 | GH12231-PA | 39..492 | 58..511 | 2219 | 89 | Plus |
Dgri\GH20841-PA | 472 | GH20841-PA | 18..470 | 68..509 | 739 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1440-PD | 551 | CG1440-PD | 41..551 | 1..511 | 2710 | 100 | Plus |
CG1440-PC | 511 | CG1440-PC | 1..511 | 1..511 | 2710 | 100 | Plus |
CG1440-PA | 488 | CG1440-PA | 2..488 | 25..511 | 2581 | 99.8 | Plus |
CG1440-PB | 368 | CG1440-PB | 1..368 | 144..511 | 1944 | 100 | Plus |
CG13423-PA | 476 | CG13423-PA | 4..474 | 62..509 | 725 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15765-PA | 524 | GI15765-PA | 74..524 | 61..511 | 2338 | 94.7 | Plus |
Dmoj\GI20946-PA | 486 | GI20946-PA | 7..484 | 58..509 | 775 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20308-PA | 486 | GL20308-PA | 21..486 | 51..511 | 2307 | 91.2 | Plus |
Dper\GL17669-PA | 467 | GL17669-PA | 5..465 | 63..509 | 730 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12954-PA | 486 | GA12954-PA | 21..486 | 51..511 | 2310 | 91.2 | Plus |
Dpse\GA12276-PA | 467 | GA12276-PA | 5..465 | 63..509 | 742 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21572-PA | 543 | GM21572-PA | 41..543 | 1..511 | 2658 | 96.3 | Plus |
Dsec\GM22024-PA | 476 | GM22024-PA | 4..474 | 62..509 | 753 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16898-PA | 456 | GD16898-PA | 2..456 | 57..511 | 2437 | 98.7 | Plus |
Dsim\GD11522-PA | 476 | GD11522-PA | 4..474 | 62..509 | 754 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18622-PA | 510 | GJ18622-PA | 46..510 | 47..511 | 2328 | 91.2 | Plus |
Dvir\GJ20667-PA | 482 | GJ20667-PA | 18..480 | 68..509 | 733 | 33.1 | Plus |