Clone AT08210 Report

Search the DGRC for AT08210

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:82
Well:10
Vector:pOTB7
Associated Gene/TranscriptCG14402-RA
Protein status:AT08210.pep: gold
Preliminary Size:474
Sequenced Size:1659

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14402 2002-01-01 Sim4 clustering to Release 2
CG14402 2002-02-22 Blastp of sequenced clone
CG14402 2003-01-01 Sim4 clustering to Release 3
CG14402 2008-04-29 Release 5.5 accounting
CG14402 2008-08-15 Release 5.9 accounting
CG14402 2008-12-18 5.12 accounting

Clone Sequence Records

AT08210.complete Sequence

1659 bp (1659 high quality bases) assembled on 2002-02-22

GenBank Submission: AY084107

> AT08210.complete
CACCTAGCACTCCTACAACAACATCTGAAATGTGGCAAGGACACAAGGAA
AAACCCACTTCCACCCGTTCGATGGCCAGGGAAGTAGTCCACCCTGAGAG
GCCTTTGCCGCCGTGGAGTCGTCTTCTGGAGCACAATGCCGAAGGTTGTC
TGCGGAAGAGAAGTGGGGAAAAGGAGGAGCACTACGAGGTGGAGATCTCC
AACCACTTGTGGTCACTTTGGGGCAGCACACAGCAAGTGAAACCAGGGGA
AAATAGTTCCTCGTCGGAGTCCGGATCCGAAAGGACCTCACCTCCTGGTC
AGGCATTGGCATGCTGCGTGTTAGCCTGTTGTGCAGGCAGTTTTCAGTCC
TTGGATTCCTGGAACTCCAGTGCGCTGGACAAGATCATGTCGAATGGGCG
GGGCTACTATGACGAAAGCTTGGCGACCAGGCAACATTGGGATCGTACAG
GAGAGCTCTGTCTGGAGTGCTTGAACACCACCTGCTTCCTTGATGGTCAC
GAGTTTTGGGTGGACATCGAAAAGCTCTGTACCGGTAAATTGTACAGCAG
AACCAAGAGCCTGGGATCCGCACTGAGTAAGTTCTTTGGCCAGCACTTGC
AAACGGGAATTCTTCAGCTTAGGGATCAGGCTCTGGCCTTTGGGTTTATC
CCAGAGTTCGCCTCCGGCGGAGCCTTCTTCCTCTTCCACTGCCAGGCGAG
GGGAAGGCCGCTTTTCAAGGACTGCGAAAGTGCCCCGTATGTGCTGAGGA
TGCGAAAGCTGCAGCAACTGCTCTACTGCATGCTCATCACATTGGACGAG
AGGCGCCACAATGTGCCCTTCAGGATCTACAAGGTGGGATGTGTGCCACG
TGCTAATTAGCTGCGTGTGGCCAAGCTGAATATGCATATCCACTCCCCCT
TAAAATTTAATCTCACCAGGCCACTGAATTATATAATTAAAATTAAAGTG
CACTATTAAGGCCAAAAAAAACCCATCATATTGATATTGATACAATATAA
ACACACAAATGTACAGTGCCTGAGAAGGTAAGTGACATCAGCCCGATTAC
ACCGCGTTTTGTATACTATGTAGGTGCACATAGTCACCGACTTGGGCTCT
CGTAACCCACGTTAAGTGTACATTTTGCCAGGCAAATCAAGAGTAATTGT
CTCACATCACTGCGCTTGACATTGCATTTGATTTGAGGAGCGTTCGTTTG
CCTTTTTCATGGTGTGGTGCTGTTTGTATCCTCATTTATGGTCTGCAAGC
GGAAATGAGTTCAGTCTTTCATTCAATTGGCGGAATTCGTTAATTGGCAA
CCACGCAAATTCAAAATATTCGCAAAACTCCCTTTTTGCGAATCGCAATG
ACGTTTGACCCCGTCAATTGAGCTGGGCTTAAATATTGGATGCTAAGACA
AATTGCTACTAAATTCGGGTGCCGCATGGTAGCGTGATAATTTCATTATG
CTTGAATTAAAATCGCATAAAACCAGCGGTGTGTATAAATAAAGTTTGTC
ACATGGCACGAAATGTGAAGGCTGTCATAAAAAAGAAAAACACTTACAAC
ATCGAGTGAAATAACGCAAAATAAATATATAAAATGGGTGGCAGCTAGGC
TTTTGGCCATTTAAACTTGTCGCACGGCTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAA

AT08210.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14402-RA 1632 CG14402-RA 1..1374 1..1373 6680 99.1 Plus
CG14402-RA 1632 CG14402-RA 1386..1632 1387..1633 1235 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20847886..20849516 1..1632 7780 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:42:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20849357..20850988 1..1633 7785 98.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20849357..20850730 1..1373 6680 99.1 Plus
2L 23513712 2L 20850742..20850988 1387..1633 1235 100 Plus
Blast to na_te.dros performed on 2019-03-16 08:51:14 has no hits.

AT08210.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:52:31 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20847886..20849516 1..1632 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:56:01 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..831 30..860 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:42:45 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..831 30..860 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:54:19 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..831 30..860 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:27 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..831 30..860 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:52:01 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..831 30..860 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:26 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..1631 1..1632 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:42:44 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..1631 1..1632 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:19 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 58..1688 1..1632 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:27 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 1..1631 1..1632 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:52:01 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
CG14402-RA 58..1688 1..1632 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:31 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20849357..20850987 1..1632 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:31 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20849357..20850987 1..1632 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:31 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20849357..20850987 1..1632 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:19 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20849357..20850987 1..1632 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:45:54 Download gff for AT08210.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20849357..20850987 1..1632 98   Plus

AT08210.hyp Sequence

Translation from 2 to 859

> AT08210.hyp
PSTPTTTSEMWQGHKEKPTSTRSMAREVVHPERPLPPWSRLLEHNAEGCL
RKRSGEKEEHYEVEISNHLWSLWGSTQQVKPGENSSSSESGSERTSPPGQ
ALACCVLACCAGSFQSLDSWNSSALDKIMSNGRGYYDESLATRQHWDRTG
ELCLECLNTTCFLDGHEFWVDIEKLCTGKLYSRTKSLGSALSKFFGQHLQ
TGILQLRDQALAFGFIPEFASGGAFFLFHCQARGRPLFKDCESAPYVLRM
RKLQQLLYCMLITLDERRHNVPFRIYKVGCVPRAN*

AT08210.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14402-PB 276 CG14402-PB 1..276 10..285 1504 100 Plus
CG14402-PA 276 CG14402-PA 1..276 10..285 1504 100 Plus
CG32436-PA 1737 CG32436-PA 1449..1715 2..278 389 36.3 Plus
CG32462-PA 284 CG32462-PA 37..264 20..278 299 33.1 Plus

AT08210.pep Sequence

Translation from 29 to 859

> AT08210.pep
MWQGHKEKPTSTRSMAREVVHPERPLPPWSRLLEHNAEGCLRKRSGEKEE
HYEVEISNHLWSLWGSTQQVKPGENSSSSESGSERTSPPGQALACCVLAC
CAGSFQSLDSWNSSALDKIMSNGRGYYDESLATRQHWDRTGELCLECLNT
TCFLDGHEFWVDIEKLCTGKLYSRTKSLGSALSKFFGQHLQTGILQLRDQ
ALAFGFIPEFASGGAFFLFHCQARGRPLFKDCESAPYVLRMRKLQQLLYC
MLITLDERRHNVPFRIYKVGCVPRAN*

AT08210.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20952-PA 260 GF20952-PA 9..259 23..274 887 65.5 Plus
Dana\GF10279-PA 1740 GF10279-PA 1484..1717 26..269 409 39.5 Plus
Dana\GF23623-PA 465 GF23623-PA 5..277 5..271 369 34.6 Plus
Dana\GF24196-PA 304 GF24196-PA 25..301 18..274 344 32.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21260-PA 276 GG21260-PA 1..276 1..276 1271 83.7 Plus
Dere\GG13167-PA 298 GG13167-PA 1..275 1..269 406 34.7 Plus
Dere\GG16179-PA 1575 GG16179-PA 1320..1553 26..269 397 38.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14919-PA 1747 GH14919-PA 1489..1722 26..269 401 38.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14402-PB 276 CG14402-PB 1..276 1..276 1504 100 Plus
CG14402-PA 276 CG14402-PA 1..276 1..276 1504 100 Plus
CG32436-PA 1737 CG32436-PA 1479..1715 23..269 385 38.6 Plus
CG32462-PA 284 CG32462-PA 37..264 11..269 299 33.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12017-PA 274 GI12017-PA 19..252 26..269 427 41.5 Plus
Dmoj\GI12016-PA 1734 GI12016-PA 1481..1714 26..269 409 39.1 Plus
Dmoj\GI12018-PA 274 GI12018-PA 19..250 26..269 377 36.3 Plus
Dmoj\GI11867-PA 269 GI11867-PA 38..262 23..269 257 32.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18526-PA 257 GL18526-PA 2..248 40..274 710 54.7 Plus
Dper\GL25184-PA 292 GL25184-PA 27..267 11..272 345 36.3 Plus
Dper\GL18679-PA 232 GL18679-PA 27..228 11..221 273 35.2 Plus
Dper\GL24683-PA 2019 GL24683-PA 1481..1616 26..172 229 38.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12957-PA 291 GA12957-PA 20..282 23..274 765 56.6 Plus
Dpse\GA16901-PA 1732 GA16901-PA 1481..1714 26..269 410 39.5 Plus
Dpse\GA16922-PA 304 GA16922-PA 43..279 27..272 379 37.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23378-PA 276 GM23378-PA 1..276 1..276 1419 95.3 Plus
Dsec\GM22362-PA 1523 GM22362-PA 1268..1501 26..269 399 38.7 Plus
Dsec\GM26927-PB 291 GM26927-PB 26..274 11..269 365 36.2 Plus
Dsec\GM26927-PA 183 GM22077-PA 26..182 11..177 218 33.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24288-PA 276 GD24288-PA 1..276 1..276 1440 96.7 Plus
Dsim\GD14954-PA 1736 GD14954-PA 1481..1714 26..269 398 38.7 Plus
Dsim\GD12052-PA 268 GD12052-PA 26..251 11..269 346 34.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13285-PA 1736 GJ13285-PA 1483..1716 26..269 406 39.1 Plus
Dvir\GJ13287-PA 272 GJ13287-PA 12..250 20..270 349 33.3 Plus
Dvir\GJ13286-PA 234 GJ13286-PA 16..211 26..269 301 33.5 Plus
Dvir\GJ13562-PA 285 GJ13562-PA 14..267 8..269 270 33 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19066-PA 249 GK19066-PA 1..249 15..275 577 46.7 Plus
Dwil\GK20472-PA 1752 GK20472-PA 1490..1723 26..269 409 39.9 Plus
Dwil\GK20498-PA 175 GK20498-PA 29..168 3..147 233 36.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12882-PA 276 GE12882-PA 1..276 1..276 1320 87.7 Plus
Dyak\GE14649-PA 193 GE14649-PA 1..171 98..269 311 40.3 Plus
Dyak\GE19749-PA 1716 GE19749-PA 1483..1694 26..269 309 33.5 Plus