BDGP Sequence Production Resources |
Search the DGRC for AT08455
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 84 |
Well: | 55 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rpn13-RD |
Protein status: | AT08455.pep: gold |
Preliminary Size: | 1852 |
Sequenced Size: | 1531 |
Gene | Date | Evidence |
---|---|---|
CG13349 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13349 | 2003-01-22 | Blastp of sequenced clone |
CG13349 | 2008-04-29 | Release 5.5 accounting |
CG13349 | 2008-08-15 | Release 5.9 accounting |
CG13349 | 2008-12-18 | 5.12 accounting |
1531 bp (1531 high quality bases) assembled on 2003-01-22
GenBank Submission: BT003652
> AT08455.complete CAACAAATGTCTAAACTGAATTTTGTTCAACAGTGTTTTGAAATACTAAA TGTTAGAATTCACCCGTTGATGGTAACACTGCTGAGCTCTCAAGAAGCAC CCGCATCATGTTTGGAAGACAAAGTGGACTGGGTAGTTCCAGCAACAGCA GCAACCTGGTGGAGTTCCGCGCAGGTCGCATGAACATGGTGGGCAAGATG GTGCATCCGGATCCGCGCAAGGGCCTGGTCTACATGACCCAGAGTGACGA TGGCCTGATGCACTTCTGCTGGAAGGATCGCACCTCCGGCAAGGTGGAGG ACGATCTCATCGTCTTCCCCGATGACTTCGAGTACAAGCGCGTCGATCAG TGCAAGACGGGCCGTGTCTATGTGCTTAAGTTCAAGTCATCGACACGCCG CATGTTCTTCTGGATGCAGGAGCCCAAGACGGACAAGGACGACGAGCAGT GCCGCCGCATCAACGAGCTGCTGAACAACCCACCATCCGCCCACCAGCGC GGCGGCGGCGGCAGCAACGACGGCGACCTCCAGTACATGCTCAACAACAT GTCGCAGCAGCAGCTGATGCAGCTCTTCGGCGGCGTTGGCCAGATGGGTG GTCTCAGCTCGCTGCTGGGCCAAATGAACTCCCGGACGCCCTCGTCGCGC AACACCTCCTCATCGGGTGGCGGTGGGGCATCGGCCTTGCAGACGCCCGA AAACGTCAGTGTGCCGCGCACTCCGAGCGCTCCATCGAAATCGGGCAGCA GCCGCAGCAGCAGCAATGTGAACTCGCAGGTCGGCGAAGGTGCCGGCTCC TCCGTTGATGCGGATGCCCCCGGTAAGAACTCAACCACATCGACCACAAC GGCGTCAAAATCGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTAT CCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTC TCGACGGCCCTACCCGGCGCCGATGCCATCAATCAGATAATTGCCGATCC GGAGCATGTCAAGACGCTGATCGTGCACCTGCCCGAGTCGGAGGATGTGG ACGATGATCGCAAGCAGCAGATCAAGGACAATATCACCTCCCCACAGTTC CAGCAGGCTCTGGCCCAGTTCTCCAGTGCCCTGCAATCGGCCCAGCTGGG ACCTGTGATCAAGCAATTCGAGTTGTCCAACGAAGCAGTGGCCGCCGCCT TCTCTGGCAATCTGGAGGATTTTGTGCGTGCTCTGGAGAAGAGTCTGCCC CCCGGTGCCACCATGGGTGGCAAACCCTCCGCCAGCGAGAAGAAGGCCAG CGATCCCGAAACCCCAACTTCAGTGGCCCGCGATGAGAACACAGATCCCG CTACCGAAAAACAGGAGGAGAAGCAAAAGTAGCTTACGTGTGCGGCTTGG TAGTCATTGATATGGAATCCGAAAGCAAATTTTTTCATGTTCTGAGTGAT TTTTGGATGCTAAATAAATTCAAATGGGAGTTAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13349-RD | 1526 | CG13349-RD | 17..1500 | 1..1484 | 7345 | 99.6 | Plus |
CG13349-RE | 1595 | CG13349-RE | 103..1500 | 87..1484 | 6915 | 99.6 | Plus |
CG13349-RA | 1532 | CG13349-RA | 67..889 | 1..823 | 4100 | 99.8 | Plus |
CG13349-RA | 1532 | CG13349-RA | 888..1445 | 927..1484 | 2730 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9845875..9846728 | 1482..629 | 4225 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 9846898..9847441 | 628..85 | 2705 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 9847649..9847734 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13958543..13959398 | 1484..629 | 4220 | 99.5 | Minus |
2R | 25286936 | 2R | 13959568..13960111 | 628..85 | 2705 | 99.8 | Minus |
2R | 25286936 | 2R | 13960319..13960404 | 86..1 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13959742..13960597 | 1484..629 | 4220 | 99.5 | Minus |
2R | 25260384 | 2R | 13960767..13961310 | 628..85 | 2705 | 99.8 | Minus |
2R | 25260384 | 2R | 13961518..13961603 | 86..1 | 430 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9846898..9847439 | 87..628 | 99 | <- | Minus |
chr2R | 9845875..9846728 | 629..1482 | 99 | <- | Minus |
chr2R | 9847649..9847734 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RE | 1..1275 | 108..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RE | 1..1275 | 108..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13-RG | 1..1275 | 108..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RE | 1..1275 | 108..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13-RG | 1..1275 | 108..1382 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RD | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RD | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13-RD | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13349-RD | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn13-RD | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13958545..13959398 | 629..1482 | 99 | <- | Minus |
2R | 13959568..13960109 | 87..628 | 99 | <- | Minus |
2R | 13960319..13960404 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13958545..13959398 | 629..1482 | 99 | <- | Minus |
2R | 13959568..13960109 | 87..628 | 99 | <- | Minus |
2R | 13960319..13960404 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13958545..13959398 | 629..1482 | 99 | <- | Minus |
2R | 13959568..13960109 | 87..628 | 99 | <- | Minus |
2R | 13960319..13960404 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9846050..9846903 | 629..1482 | 99 | <- | Minus |
arm_2R | 9847073..9847614 | 87..628 | 99 | <- | Minus |
arm_2R | 9847824..9847909 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13961518..13961603 | 1..86 | 100 | Minus | |
2R | 13959744..13960597 | 629..1482 | 99 | <- | Minus |
2R | 13960767..13961308 | 87..628 | 99 | <- | Minus |
Translation from 107 to 1381
> AT08455.hyp MFGRQSGLGSSSNSSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGL MHFCWKDRTSGKVEDDLIVFPDDFEYKRVDQCKTGRVYVLKFKSSTRRMF FWMQEPKTDKDDEQCRRINELLNNPPSAHQRGGGGSNDGDLQYMLNNMSQ QQLMQLFGGVGQMGGLSSLLGQMNSRTPSSRNTSSSGGGGASALQTPENV SVPRTPSAPSKSGSSRSSSNVNSQVGEGAGSSVDADAPGKNSTTSTTTAS KSTGAYANPFQAYLSNLSPEHGAGRSLNIDLSTALPGADAINQIIADPEH VKTLIVHLPESEDVDDDRKQQIKDNITSPQFQQALAQFSSALQSAQLGPV IKQFELSNEAVAAAFSGNLEDFVRALEKSLPPGATMGGKPSASEKKASDP ETPTSVARDENTDPATEKQEEKQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn13-PE | 424 | CG13349-PE | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PD | 424 | CG13349-PD | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PG | 424 | CG13349-PG | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PF | 389 | CG13349-PF | 1..389 | 1..424 | 1955 | 91.7 | Plus |
Rpn13-PB | 389 | CG13349-PB | 1..389 | 1..424 | 1955 | 91.7 | Plus |
Translation from 107 to 1381
> AT08455.pep MFGRQSGLGSSSNSSNLVEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGL MHFCWKDRTSGKVEDDLIVFPDDFEYKRVDQCKTGRVYVLKFKSSTRRMF FWMQEPKTDKDDEQCRRINELLNNPPSAHQRGGGGSNDGDLQYMLNNMSQ QQLMQLFGGVGQMGGLSSLLGQMNSRTPSSRNTSSSGGGGASALQTPENV SVPRTPSAPSKSGSSRSSSNVNSQVGEGAGSSVDADAPGKNSTTSTTTAS KSTGAYANPFQAYLSNLSPEHGAGRSLNIDLSTALPGADAINQIIADPEH VKTLIVHLPESEDVDDDRKQQIKDNITSPQFQQALAQFSSALQSAQLGPV IKQFELSNEAVAAAFSGNLEDFVRALEKSLPPGATMGGKPSASEKKASDP ETPTSVARDENTDPATEKQEEKQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11152-PA | 387 | GF11152-PA | 1..387 | 1..424 | 1613 | 79.9 | Plus |
Dana\GF21327-PA | 318 | GF21327-PA | 1..311 | 25..376 | 368 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22456-PA | 389 | GG22456-PA | 1..389 | 1..424 | 1739 | 87.3 | Plus |
Dere\GG18742-PA | 402 | GG18742-PA | 84..205 | 2..122 | 344 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22954-PA | 408 | GH22954-PA | 1..408 | 1..424 | 1484 | 72.4 | Plus |
Dgri\GH24600-PA | 108 | GH24600-PA | 1..93 | 31..123 | 325 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn13-PE | 424 | CG13349-PE | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PD | 424 | CG13349-PD | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PG | 424 | CG13349-PG | 1..424 | 1..424 | 2181 | 100 | Plus |
Rpn13-PF | 389 | CG13349-PF | 1..389 | 1..424 | 1955 | 91.7 | Plus |
Rpn13-PB | 389 | CG13349-PB | 1..389 | 1..424 | 1955 | 91.7 | Plus |
Rpn13-PA | 389 | CG13349-PA | 1..389 | 1..424 | 1955 | 91.7 | Plus |
Rpn13R-PA | 324 | CG6789-PA | 2..315 | 10..379 | 419 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18444-PA | 416 | GI18444-PA | 1..416 | 1..420 | 1366 | 70.7 | Plus |
Dmoj\GI15270-PA | 203 | GI15270-PA | 65..187 | 3..122 | 330 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17076-PA | 384 | GL17076-PA | 1..384 | 1..424 | 1577 | 78 | Plus |
Dper\GL14276-PA | 204 | GL14276-PA | 3..134 | 16..137 | 298 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12224-PA | 384 | GA12224-PA | 1..384 | 1..424 | 1567 | 77.8 | Plus |
Dpse\GA22734-PA | 319 | GA22734-PA | 3..312 | 16..386 | 332 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20242-PA | 389 | GM20242-PA | 1..389 | 1..424 | 1835 | 90.3 | Plus |
Dsec\GM23253-PA | 389 | GM23253-PA | 1..389 | 1..424 | 1835 | 90.3 | Plus |
Dsec\GM12384-PA | 322 | GM12384-PA | 2..313 | 10..379 | 406 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25728-PA | 389 | GD25728-PA | 1..389 | 1..424 | 1787 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21528-PA | 406 | GJ21528-PA | 1..406 | 1..424 | 1430 | 69.8 | Plus |
Dvir\GJ16842-PA | 199 | GJ16842-PA | 73..180 | 15..122 | 353 | 53.7 | Plus |